BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4236.p (407 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value slr1610 [QR] COG0500 SAM-dependent methyltransferases Syn Synech... 493 e-139 AGl168 [QR] COG0500 SAM-dependent methyltransferases Atu Agrobac... 414 e-115 SMb21418 [QR] COG0500 SAM-dependent methyltransferases Sme Sinor... 394 e-109 SMb21061 [QR] COG0500 SAM-dependent methyltransferases Sme Sinor... 291 3e-78 slr1763 [QR] COG0500 SAM-dependent methyltransferases Syn Synech... 205 2e-52 >slr1610 [QR] COG0500 SAM-dependent methyltransferases Syn Synechocystis Length = 433 Score = 493 bits (1269), Expect = e-139, Method: Compositional matrix adjust. Identities = 242/407 (59%), Positives = 296/407 (72%), Gaps = 3/407 (0%) Query: 1 MKCRHCQTELHDTFIDLGFSPPSNAYLKAEDLRRPETTYPLKVMVCRQCWLVQTEDYTHY 60 MKCRHC T L TF+DLGF+PPSNAYL DL RPE TYPL++ VC QCWLVQTEDYT Sbjct: 28 MKCRHCHTPLKQTFLDLGFAPPSNAYLNQIDLSRPEVTYPLRIKVCEQCWLVQTEDYTQA 87 Query: 61 DQLFANDYAYFSSTSSTWLQHAARYVDMIAARLALGSQSLVVELAANDGYLLQYVQQKGI 120 ++LF DYAYFSSTSS+WL HAARYV+ I RL L + S V+E+AANDGYLL+ G+ Sbjct: 88 EELFCGDYAYFSSTSSSWLSHAARYVEKITERLGLTTDSFVIEVAANDGYLLKNFVAAGV 147 Query: 121 PCLGVEPTTSTADAARAKGIPIVEEFFGVALGQRLRASHGAADLIAANNVLAHVPDINDF 180 PCLG+EPT STA AA GI +++EFFG LG+ L A ADLI NNV AHVPDINDF Sbjct: 148 PCLGIEPTASTAAAAEKLGIAVLKEFFGENLGRSLSAKGQQADLIIGNNVFAHVPDINDF 207 Query: 181 VGGMTALLAPQGTVTVECPHLLNLIEQSQFDTIYHEHFSYLSLVAVQRVMQAQGLRVYDV 240 G+ L P GT+T+E PHL+ L+ Q+QFDT+YHEHFSYLSL V ++ GL+V+DV Sbjct: 208 TLGLKQALKPGGTITLEFPHLMQLLAQTQFDTVYHEHFSYLSLYTVTKIFAKAGLQVWDV 267 Query: 241 EALPTHGGSLRIYACH-ADAAIATTPAVAAMLARERDFGLERIEGYAGFQARAEEIKLQL 299 E LPTHGGSLR+Y CH D ++ V +L +E GL+ + Y FQ RA++IK QL Sbjct: 268 EELPTHGGSLRVYGCHLGDRQVSER--VRELLKQETAQGLQDLAIYQHFQERADQIKNQL 325 Query: 300 LSFLLEQKRAGKKVLAYGAAAKGNTLLNYSGVHPDLLPMVADAALSKQGKYMPGSHIPIV 359 L+FL+EQK AGK V YGAAAKGNTLLNY+GV PDLLP V DA+ SKQGK++PGSHI I+ Sbjct: 326 LAFLIEQKTAGKVVAGYGAAAKGNTLLNYAGVKPDLLPFVCDASSSKQGKFLPGSHIAIL 385 Query: 360 SPQRLLEEKPDVVLILPWNIKDEVAQQLAQIRTWGARFAIAVPQLQV 406 P + E+ PD VLILPWN++ E+ QL + WG +F A+P LQ+ Sbjct: 386 PPTAIAEKHPDFVLILPWNLRTEIMTQLGYVGDWGGQFVTAIPNLQI 432 >AGl168 [QR] COG0500 SAM-dependent methyltransferases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 430 Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust. Identities = 194/404 (48%), Positives = 254/404 (62%), Gaps = 1/404 (0%) Query: 3 CRHCQTELHDTFIDLGFSPPSNAYLKAEDLRRPETTYPLKVMVCRQCWLVQTEDYTHYDQ 62 CR C + L TF+DLG SPP +++ A+ E YPL VC +C+LVQ ++Y + Sbjct: 20 CRLCNSPLVHTFVDLGMSPPCESFVAADAANDVEPFYPLHAFVCDECFLVQLQEYVAPEN 79 Query: 63 LFANDYAYFSSTSSTWLQHAARYVDMIAARLALGSQSLVVELAANDGYLLQYVQQKGIPC 122 +F +YAYFSS S +W+ HA RY DM+ R ALG S VVELA+NDGYLLQ+ IP Sbjct: 80 IFT-EYAYFSSFSDSWVAHAKRYCDMVIERFALGQSSFVVELASNDGYLLQHFLTSNIPM 138 Query: 123 LGVEPTTSTADAARAKGIPIVEEFFGVALGQRLRASHGAADLIAANNVLAHVPDINDFVG 182 LG+EP + A A KGIP + EFF AL + A ADLI NNVLA VPDINDFV Sbjct: 139 LGIEPAVNVAKVAIGKGIPTLTEFFNEALATDMAARGQKADLIIGNNVLAQVPDINDFVA 198 Query: 183 GMTALLAPQGTVTVECPHLLNLIEQSQFDTIYHEHFSYLSLVAVQRVMQAQGLRVYDVEA 242 GM LL P+G +T+E PH+ LI ++QFDTIYHEHFSY SL+ ++++ + GL+V+DVE Sbjct: 199 GMKTLLKPEGVITLEFPHIEKLIAENQFDTIYHEHFSYFSLLTIEKMARRHGLKVFDVEE 258 Query: 243 LPTHGGSLRIYACHADAAIATTPAVAAMLARERDFGLERIEGYAGFQARAEEIKLQLLSF 302 +PTHGGSLR++ H D V ++LARE + GL++IE Y F + K LLSF Sbjct: 259 IPTHGGSLRVFFSHEDIRFPREARVDSLLARELNAGLDKIETYTAFAEAVRQTKRNLLSF 318 Query: 303 LLEQKRAGKKVLAYGAAAKGNTLLNYSGVHPDLLPMVADAALSKQGKYMPGSHIPIVSPQ 362 L+ K K + AYGA KGNTLLNY G+ D + D K G+ PG HIPI Sbjct: 319 LIRLKEMRKSICAYGAPGKGNTLLNYCGIGTDFIDFAVDRNPYKHGRLTPGMHIPIRPVS 378 Query: 363 RLLEEKPDVVLILPWNIKDEVAQQLAQIRTWGARFAIAVPQLQV 406 + KPD VLILPWN+K+E+ Q+ IR WG +F + +P + + Sbjct: 379 EIPHMKPDYVLILPWNLKNEIVAQMKDIRNWGGKFIVPIPDISI 422 >SMb21418 [QR] COG0500 SAM-dependent methyltransferases Sme Sinorhizobium meliloti Length = 410 Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust. Identities = 203/406 (50%), Positives = 250/406 (61%), Gaps = 1/406 (0%) Query: 2 KCRHCQTELHDTFIDLGFSPPSNAYLK-AEDLRRPETTYPLKVMVCRQCWLVQTEDYTHY 60 CR C T L DLG +P SN++L+ E+ E +PLKVMVC +C LVQT + Sbjct: 4 SCRFCSTPLETVVADLGATPWSNSFLEPTEEAIAREKAFPLKVMVCSECLLVQTTETVPA 63 Query: 61 DQLFANDYAYFSSTSSTWLQHAARYVDMIAARLALGSQSLVVELAANDGYLLQYVQQKGI 120 D++F DY Y SS S++WL HA RY + +A R AL +S VVE+A+NDGYLLQY K I Sbjct: 64 DEIFNADYHYLSSFSTSWLDHARRYAEAMAERFALDGRSQVVEVASNDGYLLQYFAAKRI 123 Query: 121 PCLGVEPTTSTADAARAKGIPIVEEFFGVALGQRLRASHGAADLIAANNVLAHVPDINDF 180 P LGVEP + A A + +P FFG L A ADL AANNVLAHVPDI DF Sbjct: 124 PVLGVEPAANAARIAEGRNVPTHVAFFGRDTANALVARGVRADLTAANNVLAHVPDIADF 183 Query: 181 VGGMTALLAPQGTVTVECPHLLNLIEQSQFDTIYHEHFSYLSLVAVQRVMQAQGLRVYDV 240 V G LL P G T E PHLL LIE QFDTIYHEH+SYLSL AV+R+ A GL+V+DV Sbjct: 184 VSGFAILLKPDGVATFEFPHLLRLIEGIQFDTIYHEHYSYLSLAAVERIFAACGLKVFDV 243 Query: 241 EALPTHGGSLRIYACHADAAIATTPAVAAMLARERDFGLERIEGYAGFQARAEEIKLQLL 300 E LPTHGGSLR+YA T +A + A E GL ++ YA F R + Sbjct: 244 EELPTHGGSLRVYAQPVTGTRPATETLAEVRAEEESAGLTQMPTYAAFGKRIASVCDGFR 303 Query: 301 SFLLEQKRAGKKVLAYGAAAKGNTLLNYSGVHPDLLPMVADAALSKQGKYMPGSHIPIVS 360 +FL + + K+V AYGAAAKGNT LN G+ + + D KQGK PGSHIPI Sbjct: 304 AFLADARSENKRVAAYGAAAKGNTFLNVCGLTASDIDFIVDRNDLKQGKLSPGSHIPIYD 363 Query: 361 PQRLLEEKPDVVLILPWNIKDEVAQQLAQIRTWGARFAIAVPQLQV 406 P R+ KPD V+ILPWN+ DE+ A IR+WG RF +A+PQ++V Sbjct: 364 PARIEAVKPDYVVILPWNLTDEIVAAHAYIRSWGGRFVVAIPQVRV 409 >SMb21061 [QR] COG0500 SAM-dependent methyltransferases Sme Sinorhizobium meliloti Length = 415 Score = 291 bits (744), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 169/401 (42%), Positives = 235/401 (58%), Gaps = 5/401 (1%) Query: 3 CRHCQTELHDTFIDLGFSPPSNAYLKAEDLRRPETTYPLKVMVCRQCWLVQTEDYTHYDQ 62 CR C +TF+DLG +P + L D+ +PE +PL+V CR C L Q + + Sbjct: 14 CRSCGGTRLETFLDLGATPLVDRLLVDGDIDKPELIFPLRVAFCRDCSLAQITETVSPNI 73 Query: 63 LFANDYAYFSSTSSTWLQHAARY-VDMIAARLALGSQSLVVELAANDGYLLQYVQQKGIP 121 LFA+DY Y+SS S L+H+ + +IA R LG +SLV+ELA+NDGYLL+ + G+ Sbjct: 74 LFADDYPYYSSFSPALLEHSRENALSLIACR-NLGPESLVIELASNDGYLLKNYVEAGVK 132 Query: 122 CLGVEPTTSTADAARAKGIPIVEEFFGVALGQRLRASHGAADLIAANNVLAHVPDINDFV 181 LG++P A AA G+ FF L + LRA AD+I ANNVLAHV D N FV Sbjct: 133 VLGIDPADGPAAAAERIGVQTRCTFFTRDLAETLRAEGAVADVIHANNVLAHVADTNGFV 192 Query: 182 GGMTALLAPQGTVTVECPHLLNLIEQSQFDTIYHEHFSYLSLVAVQRVMQAQGLRVYDVE 241 G+ LL G +E P+++ LIE +FDTIYHEH Y S+ A+ R+ + GL + +++ Sbjct: 193 AGIARLLKEDGVAVIEVPYVVPLIEHCEFDTIYHEHLCYFSVTALDRLFRRHGLYLNEIK 252 Query: 242 ALPTHGGSLRIYACHADAAIATTPAVAAMLARERDFGLERIEGYAGFQARAEEIKLQLLS 301 L HGGSLR+Y + AV LA+E G++ I+ + F A+ + +K +LL+ Sbjct: 253 PLSIHGGSLRLY---VELRQRVGAAVKKRLAQETALGIDTIDYFRNFSAKVDVLKRELLA 309 Query: 302 FLLEQKRAGKKVLAYGAAAKGNTLLNYSGVHPDLLPMVADAALSKQGKYMPGSHIPIVSP 361 L K G + AYGAAAKG TL+N G+ DL+ V D + KQGKYMPG +PI S Sbjct: 310 LLHRLKSEGSSIAAYGAAAKGATLINTIGIGRDLIDFVVDRNVHKQGKYMPGQRLPIRST 369 Query: 362 QRLLEEKPDVVLILPWNIKDEVAQQLAQIRTWGARFAIAVP 402 + L++ +PD VL+L WN DE+ Q A T G +F I VP Sbjct: 370 EALVQAQPDYVLLLAWNFADEILAQQADYHTRGGKFIIPVP 410 >slr1763 [QR] COG0500 SAM-dependent methyltransferases Syn Synechocystis Length = 400 Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 126/402 (31%), Positives = 197/402 (49%), Gaps = 8/402 (1%) Query: 1 MKCRHCQTELHDTFIDLGFSPPSNAYLKAEDLRRPETTYPLKVMVCRQCWLVQTEDYTHY 60 M+CR C + D IDLG P N +L ++ + E YPL+V+ C+ C VQ DYT Sbjct: 1 MQCRVCDSTRLDLAIDLGEQPWCNHFLTPAEVGQ-EPYYPLRVLYCQDCGTVQL-DYTVK 58 Query: 61 DQLFANDYAYFSSTSSTWLQHAARYVDMIAARLALGS-QSLVVELAANDGYLLQYVQQKG 119 ++ D+ Y S + + H AR + R + V+++ +NDG L++ Q G Sbjct: 59 KEIMFGDHTYLSGVTKSLSDHFARVAQEVDERFFANTPGKSVLDIGSNDGTQLKHFQALG 118 Query: 120 IPCLGVEPTTSTADAARAKGIPIVEEFFGVALGQRLRASHGAADLIAANNVLAHVPDIND 179 LGVE + +TA A G+P + +FF + + ++L A I A V H+ +++ Sbjct: 119 YDVLGVESSKTTAKIANDAGVPTLNDFFNLEVVEKLGRKFSA---INAAGVFFHLEELHS 175 Query: 180 FVGGMTALLAPQGTVTVECPHLLNLIEQSQFDTIYHEHFSYLSLVAVQRVMQAQGLRVYD 239 G+ LA G V+ ++ ++E FD IYHEH Y +L ++ ++ GL ++D Sbjct: 176 VTEGIREALAEDGVFVVQFLYMKRIVENLAFDQIYHEHLLYYNLQTIEVLLNRHGLSMFD 235 Query: 240 VEALPTHGGSLRIYACHADAAIATTPAVAAMLARERDFGLERIEGYAGFQARAEEIKLQL 299 P HGGS+ + H T + AM E D + Y F R E +K + Sbjct: 236 AYLAPIHGGSIVGFVTHQ-GKRQPTERLQAMRQSEIDEKSNDYQTYLDFAQRIETMKAEN 294 Query: 300 LSFLLEQKRAGKKVLAYGAAAKGNTLLNYSGVHPDLLPMVADAALSKQGKYMPGSHIPIV 359 L++L E K+AGK V +GA KGNTLLNY G+ L + + ++G PG HIP++ Sbjct: 295 LAYLDEAKQAGKTVWGFGAPVKGNTLLNYFGIGTQYLDYLVEKNELRRGLVSPGMHIPLL 354 Query: 360 SPQRLLEEKPDVVLILPWNIKDEVAQQLAQIRTWGARFAIAV 401 ++ L PD+ +L WN K E+ + G F V Sbjct: 355 I-EKELTTLPDIYYVLAWNFKREILANNQHLIDQGVEFFFPV 395