BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4222.p (290 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3318 [C] COG0224 F0F1-type ATP synthase, gamma subunit Rso Ra... 445 e-125 XF1144 [C] COG0224 F0F1-type ATP synthase, gamma subunit Xfa Xyl... 345 7e-95 STM3866 [C] COG0224 F0F1-type ATP synthase, gamma subunit Sty Sa... 343 4e-94 atpG [C] COG0224 F0F1-type ATP synthase, gamma subunit Eco Esche... 343 4e-94 ZatpG [C] COG0224 F0F1-type ATP synthase, gamma subunit EcZ Esch... 343 4e-94 >RSc3318 [C] COG0224 F0F1-type ATP synthase, gamma subunit Rso Ralstonia solanacearum Length = 291 Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust. Identities = 213/292 (72%), Positives = 255/292 (87%), Gaps = 4/292 (1%) Query: 1 MATGKEIRGKIKSVENTKKITKAMEMVAASKMRKAQDRMHAARPYSDKIRNIAANLSQAN 60 MA KEIR KIKSV+NT+KITKAMEMVAASKMR+AQ+RM +ARPY++KIRN+AA+++QAN Sbjct: 1 MAGTKEIRTKIKSVQNTRKITKAMEMVAASKMRRAQERMRSARPYAEKIRNVAAHMAQAN 60 Query: 61 PEYVHPFMVQQDTAKRVGFIVVTTDKGLCGGMNTNSLRLLTNKFRELEGQGKSIESVAIG 120 PEY HPFMV++D KR G IVVTTDKGLCGG+NTN LR +TN+ R+L+ +G ++ AIG Sbjct: 61 PEYQHPFMVKRDV-KRAGLIVVTTDKGLCGGLNTNVLRAVTNQLRDLQNKGVESQATAIG 119 Query: 121 NKGLGFLNRIGARVAANVTQLGDTPHLEKLIGPVKVLLDAYQEGKLDAVYLVYTKFINTM 180 +KG+ FL RIGA+V +NV LGDTPHLEKLIG +KV LDA+ G++DAVYL YT+FINTM Sbjct: 120 SKGMQFLGRIGAKVVSNVVHLGDTPHLEKLIGAIKVQLDAFTAGEIDAVYLAYTRFINTM 179 Query: 181 KQEATLQQLLPLTSDKLK---ADEGAHSWDYIYEPDVQSVVDELLVRYVEALIYQAVAEN 237 +QE ++QLLPLT+DKL A++ A+SWDYIYEPD Q+VVDELL+RYVEAL+YQAVAEN Sbjct: 180 RQEPVVEQLLPLTADKLTQTAAEKQAYSWDYIYEPDAQTVVDELLIRYVEALVYQAVAEN 239 Query: 238 MASEQSARMVAMKAASDNAGSVIGELKLVYNKTRQAAITKELSEIVAGAAAV 289 MASEQSARMVAMKAASDNA +VIGEL+LVYNKTRQAAITKELSEIV GAAAV Sbjct: 240 MASEQSARMVAMKAASDNAKNVIGELQLVYNKTRQAAITKELSEIVGGAAAV 291 >XF1144 [C] COG0224 F0F1-type ATP synthase, gamma subunit Xfa Xylella fastidiosa 9a5c Length = 287 Score = 345 bits (885), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 158/289 (54%), Positives = 220/289 (76%), Gaps = 2/289 (0%) Query: 1 MATGKEIRGKIKSVENTKKITKAMEMVAASKMRKAQDRMHAARPYSDKIRNIAANLSQAN 60 MA+G+EI+ KIKSV+NT+K+T+A+EMV+ASK+RKAQ++M +RPY+ ++ + +L+QAN Sbjct: 1 MASGREIKSKIKSVQNTRKVTRALEMVSASKIRKAQEQMKISRPYAQAMKQMTGHLAQAN 60 Query: 61 PEYVHPFMVQQDTAKRVGFIVVTTDKGLCGGMNTNSLRLLTNKFRELEGQGKSIESVAIG 120 +Y+HPF++ KR+G+IV+++D+GL GG+N N R + + R+ + +G ++ V IG Sbjct: 61 TDYLHPFLIAHKQVKRIGYIVISSDRGLAGGLNNNLFRKMLGEMRQWQDKGAEVDIVTIG 120 Query: 121 NKGLGFLNRIGARVAANVTQLGDTPHLEKLIGPVKVLLDAYQEGKLDAVYLVYTKFINTM 180 K F RI + +VT LGDTP LE+LIG +KV+LDAY E KLD VYLVY +FINTM Sbjct: 121 QKASVFFRRIKVNILGSVTHLGDTPRLEQLIGVIKVMLDAYTEEKLDRVYLVYNRFINTM 180 Query: 181 KQEATLQQLLPLTSDKLKADEGAHSWDYIYEPDVQSVVDELLVRYVEALIYQAVAENMAS 240 Q+A+ QLLPL + K K H WDY+YEPD +V++ ++ RY+E+L+YQA+ EN+AS Sbjct: 181 VQKASFDQLLPLLAAKDKV--AHHDWDYLYEPDAATVLEHVMRRYIESLVYQAMLENIAS 238 Query: 241 EQSARMVAMKAASDNAGSVIGELKLVYNKTRQAAITKELSEIVAGAAAV 289 E +ARMVAMKAASDNA +IG L+LVYNK RQAAIT+E+SEIV GAAAV Sbjct: 239 EHAARMVAMKAASDNANKLIGTLQLVYNKARQAAITQEISEIVGGAAAV 287 >STM3866 [C] COG0224 F0F1-type ATP synthase, gamma subunit Sty Salmonella typhimurium LT2 Length = 287 Score = 343 bits (879), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 166/289 (57%), Positives = 217/289 (75%), Gaps = 2/289 (0%) Query: 1 MATGKEIRGKIKSVENTKKITKAMEMVAASKMRKAQDRMHAARPYSDKIRNIAANLSQAN 60 MA KEIR KI SV+NT+KITKAMEMVAASKMRK+QDRM A+RPY++ +R + +L+ N Sbjct: 1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGN 60 Query: 61 PEYVHPFMVQQDTAKRVGFIVVTTDKGLCGGMNTNSLRLLTNKFRELEGQGKSIESVAIG 120 EY HP++ ++D KRVG++VV+TD+GLCGG+N N + L + +G E IG Sbjct: 61 LEYKHPYLEERDV-KRVGYLVVSTDRGLCGGLNINLFKKLLADMKAWSDKGVQCELAMIG 119 Query: 121 NKGLGFLNRIGARVAANVTQLGDTPHLEKLIGPVKVLLDAYQEGKLDAVYLVYTKFINTM 180 +KG+ F N +G V A VT +GD P L +LIGPVKV+L AY EG+LD +Y+V KFINTM Sbjct: 120 SKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFINTM 179 Query: 181 KQEATLQQLLPLTSDKLKADEGAHSWDYIYEPDVQSVVDELLVRYVEALIYQAVAENMAS 240 Q T+ QLLPL + + D +WDY+YEPD ++++D LL RYVE+ +YQ V EN+AS Sbjct: 180 SQVPTITQLLPLPASE-DDDLKRKAWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLAS 238 Query: 241 EQSARMVAMKAASDNAGSVIGELKLVYNKTRQAAITKELSEIVAGAAAV 289 EQ+ARMVAMKAA+DN GS+I EL+LVYNK RQA+IT+EL+EIV+GAAAV Sbjct: 239 EQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV 287 >atpG [C] COG0224 F0F1-type ATP synthase, gamma subunit Eco Escherichia coli K12 Length = 287 Score = 343 bits (879), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 167/290 (57%), Positives = 218/290 (75%), Gaps = 4/290 (1%) Query: 1 MATGKEIRGKIKSVENTKKITKAMEMVAASKMRKAQDRMHAARPYSDKIRNIAANLSQAN 60 MA KEIR KI SV+NT+KITKAMEMVAASKMRK+QDRM A+RPY++ +R + +L+ N Sbjct: 1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGN 60 Query: 61 PEYVHPFMVQQDTAKRVGFIVVTTDKGLCGGMNTNSLRLLTNKFRELEGQGKSIESVAIG 120 EY HP++ +D KRVG++VV+TD+GLCGG+N N + L + + +G + IG Sbjct: 61 LEYKHPYLEDRDV-KRVGYLVVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIG 119 Query: 121 NKGLGFLNRIGARVAANVTQLGDTPHLEKLIGPVKVLLDAYQEGKLDAVYLVYTKFINTM 180 +KG+ F N +G V A VT +GD P L +LIGPVKV+L AY EG+LD +Y+V KFINTM Sbjct: 120 SKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFINTM 179 Query: 181 KQEATLQQLLPLTSDKLKADEGAH-SWDYIYEPDVQSVVDELLVRYVEALIYQAVAENMA 239 Q T+ QLLPL + D+ H SWDY+YEPD ++++D LL RYVE+ +YQ V EN+A Sbjct: 180 SQVPTISQLLPLPAS--DDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLA 237 Query: 240 SEQSARMVAMKAASDNAGSVIGELKLVYNKTRQAAITKELSEIVAGAAAV 289 SEQ+ARMVAMKAA+DN GS+I EL+LVYNK RQA+IT+EL+EIV+GAAAV Sbjct: 238 SEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV 287 >ZatpG [C] COG0224 F0F1-type ATP synthase, gamma subunit EcZ Escherichia coli O157:H7 EDL933 Length = 287 Score = 343 bits (879), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 167/290 (57%), Positives = 218/290 (75%), Gaps = 4/290 (1%) Query: 1 MATGKEIRGKIKSVENTKKITKAMEMVAASKMRKAQDRMHAARPYSDKIRNIAANLSQAN 60 MA KEIR KI SV+NT+KITKAMEMVAASKMRK+QDRM A+RPY++ +R + +L+ N Sbjct: 1 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGN 60 Query: 61 PEYVHPFMVQQDTAKRVGFIVVTTDKGLCGGMNTNSLRLLTNKFRELEGQGKSIESVAIG 120 EY HP++ +D KRVG++VV+TD+GLCGG+N N + L + + +G + IG Sbjct: 61 LEYKHPYLEDRDV-KRVGYLVVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIG 119 Query: 121 NKGLGFLNRIGARVAANVTQLGDTPHLEKLIGPVKVLLDAYQEGKLDAVYLVYTKFINTM 180 +KG+ F N +G V A VT +GD P L +LIGPVKV+L AY EG+LD +Y+V KFINTM Sbjct: 120 SKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFINTM 179 Query: 181 KQEATLQQLLPLTSDKLKADEGAH-SWDYIYEPDVQSVVDELLVRYVEALIYQAVAENMA 239 Q T+ QLLPL + D+ H SWDY+YEPD ++++D LL RYVE+ +YQ V EN+A Sbjct: 180 SQVPTISQLLPLPAS--DDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLA 237 Query: 240 SEQSARMVAMKAASDNAGSVIGELKLVYNKTRQAAITKELSEIVAGAAAV 289 SEQ+ARMVAMKAA+DN GS+I EL+LVYNK RQA+IT+EL+EIV+GAAAV Sbjct: 238 SEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV 287