BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4204.p         (325 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

all2379_2 [T] COG2202 FOG Nos Nostoc sp. PCC 7120                      30   9.0  

>all2379_2 [T] COG2202 FOG Nos Nostoc sp. PCC 7120
          Length = 622

 Score = 29.6 bits (65), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 203 LDPDADRLAIKFSEKTTDTWNYLGTNDTALWSRNIEGRPALLHIDMDYFNNRYDG 257
           L     RL +  S  +T  W++    +  +WS   E   +L +ID   FNNR++ 
Sbjct: 115 LQNSEQRLQLALSASSTGMWDWNLQTNEVVWS---ESMCSLFNIDPQTFNNRFES 166