BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4201.p (217 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA4012 [R] COG2802 Uncharacterized protein, similar to the N-ter... 102 5e-22 RSc0402 [R] COG2802 Uncharacterized protein, similar to the N-te... 100 2e-21 VC2303 [R] COG2802 Uncharacterized protein, similar to the N-ter... 84 2e-16 DR2189 [R] COG2802 Uncharacterized protein, similar to the N-ter... 72 1e-12 Rv0434 [R] COG2802 Uncharacterized protein, similar to the N-ter... 62 1e-09 >PA4012 [R] COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease Pae Pseudomonas aeruginosa Length = 197 Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 108/204 (52%), Gaps = 19/204 (9%) Query: 15 LTIPLFPLASTLFPQGRLPLQIFEVRYLDMIRKCIAEGSSFGVVALTDGSEVRRPGQTER 74 + +PLFPL + LFP RL LQIFE RYLDMI +C+ +G+ FGVV + +G EV R Sbjct: 1 MKLPLFPLNAVLFPGCRLDLQIFEARYLDMISRCMKQGTGFGVVTIGEGREVGEA--PSR 58 Query: 75 FVGVGTVARIQEWSTPSPGLMRIACLGGERFRILQAEQQKHGLWTAQVEMMEDDHAVSIP 134 VG A +++W GL+ I GG RF++L E Q L ++E ED +P Sbjct: 59 LAMVGCEASVRDWQQRPNGLLGIRVEGGRRFQVLSVEVQADQLSVGEIEWFED-----LP 113 Query: 135 EE-LRNTAQALENLLQSVLRQGLPDSEVPIAAPYRL--DDCGW--VANRWAEMMPIRVEL 189 E+ L L LL SVL +E P+ A + + G +AN+ A ++P E Sbjct: 114 EQPLTYEHNDLAALL-SVL------AEHPMVAALEMGGEPGGQQDLANQLAYLLPFDTER 166 Query: 190 KQSLLALDNPLLRLELVQDALDEL 213 K LLAL + ++L +Q L+ L Sbjct: 167 KLELLALPDAQMQLARIQVLLEHL 190 >RSc0402 [R] COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease Rso Ralstonia solanacearum Length = 216 Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 95/184 (51%), Gaps = 3/184 (1%) Query: 24 STLFPQGRLPLQIFEVRYLDMIRKCIAEGSSFGVVALTDGSEVRRPGQTERFVGVGTVAR 83 + LFP G LPL+IFE RY+DM+R C+ E + FGV + G+EV T V +G +A Sbjct: 27 TVLFPGGLLPLRIFEARYIDMVRTCLREQTPFGVCLIERGNEVAADTPTVP-VDIGCIAH 85 Query: 84 IQEWSTPSPGLMRIACLGGERFRILQAEQQKHGLWTAQVEMMEDDHAVSIPEELRNTAQA 143 I E GL+ I G +RF++ + GL VE + D E + A Sbjct: 86 IVECDMEQLGLLMIKARGTQRFKVRSVDTTVGGLLRGTVEPIGADLEDCKGELFDDCVNA 145 Query: 144 LENLLQSVLRQGLPDSEVPIAAPYRLDDCGWVANRWAEMMPIRVELKQSLLALDNPLLRL 203 L ++ ++ + +VP+A PY WV NR E++P+ ++ KQ L+ L + +R+ Sbjct: 146 LRRIVTTL--GAREEGQVPLAEPYDWASPSWVGNRLCELLPVPLKAKQKLMELMDAGMRI 203 Query: 204 ELVQ 207 E+V Sbjct: 204 EIVH 207 >VC2303 [R] COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease Vch Vibrio cholerae Length = 193 Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/169 (33%), Positives = 85/169 (50%), Gaps = 10/169 (5%) Query: 17 IPLFPLASTLFPQGRLPLQIFEVRYLDMIRKCIAEGSSFGVVALTDGSEVRRPGQTERFV 76 I LFPL+S + P+G++ L+IFE RY M+ +C GS FG + L D + + F Sbjct: 4 IMLFPLSSVVLPEGKMKLRIFEPRYQRMVAQCSKTGSGFG-LCLFDSKSNKNANELSEF- 61 Query: 77 GVGTVARIQEWSTPSPGLMRIACLGGERFRILQAEQQKHGLWTAQVEMMEDDHAVSIPEE 136 GT+ +I ++ T S GL+ I +G RF I + + GL A V+ D + +E Sbjct: 62 --GTLVKIVDFETLSDGLLGITVVGIRRFAIRKVRVEYDGLRIATVQWFPDWPS----QE 115 Query: 137 LRNTAQALENLLQSVLRQGLPDSEVPIAAPYRLDDCGWVANRWAEMMPI 185 L + L LQ V RQ E+ + DD WV RW E++P+ Sbjct: 116 LLERERFLGEQLQEVYRQFPQIGELHSLCFF--DDASWVCQRWLELLPL 162 >DR2189 [R] COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease Dra Deinococcus radiodurans Length = 213 Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 1/98 (1%) Query: 10 PPISALTIPLFPLASTLFPQGRLPLQIFEVRYLDMIRKCIAEGSSFGVVALTDGSEVRRP 69 P + L++PLFPL + LFP LPL +FE RY ++R+ A G FGVV + G + P Sbjct: 2 PFMPTLSLPLFPLPTVLFPGQALPLYVFEERYRALLRRVQASGEPFGVVWIERGRDSTLP 61 Query: 70 GQTERFVGVGTVARIQEWSTPSPGLMRIACLGGERFRI 107 ER VGT+A + E G I +GGERFR+ Sbjct: 62 LH-ERLSLVGTLAHLTEAEVHEDGTSSILVVGGERFRL 98 >Rv0434 [R] COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease Mtu Mycobacterium tuberculosis H37Rv Length = 217 Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 20/216 (9%) Query: 12 ISALTIPLFPLASTLFPQGRLPLQIFEVRYLDMIRKCIAEGS-SFGVVALTDGSEVRRPG 70 + + + +FPL S P LPL IFE RY ++R C+ FGVV ++ G EV G Sbjct: 4 FAPVELAMFPLESAPLPDEDLPLHIFEPRYAALVRDCMDTADPRFGVVLISRGREV---G 60 Query: 71 QTERFVGVGTVARIQEWSTPSPGLMRIACLGGERFRILQ------AEQQKHGLWTAQVEM 124 + VGT+ARI E + G + C GER R+ + K W Q Sbjct: 61 GGDTRCDVGTLARITECADAGSGRYMLRCRVGERIRVCDWLPDDPYPRAKVRFWPDQ--- 117 Query: 125 MEDDHAVSIPE--ELRNTAQALENLLQSVLRQGLPDSEVPIAAPYRLD--DCGWVANRWA 180 H V+ + E+ + AL + + LP EV + P +D D G A Sbjct: 118 --PGHPVTAAQLLEVEDRVVALFERIAAARGVRLPAREVVLGYPV-VDPADTGQRLYALA 174 Query: 181 EMMPIRVELKQSLLALDNPLLRLELVQDALDELGWL 216 +P+ + ++LA + RL + DALD + + Sbjct: 175 CRVPMGPADRYAVLATPSAADRLVRLGDALDSVAAM 210