BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4194.p         (121 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA2045 [S] COG0759 Uncharacterized conserved protein Pae Pseudom...    94   6e-20
RSc0003 [S] COG0759 Uncharacterized conserved protein Rso Ralsto...    92   3e-19
BS_ytjA [S] COG0759 Uncharacterized conserved protein Bsu Bacill...    89   3e-18
FN0003 [S] COG0759 Uncharacterized conserved protein Fnu Fusobac...    87   1e-17
lin1778 [S] COG0759 Uncharacterized conserved protein Lin Lister...    85   4e-17

>PA2045 [S] COG0759 Uncharacterized conserved protein Pae Pseudomonas
          aeruginosa
          Length = 86

 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 40/73 (54%), Positives = 52/73 (71%)

Query: 1  MKTPLLLLLRAYKLGVSPFLGQNCRFYPSCSDYAAEAVRLHGALKGSLLAGKRLCKCHPW 60
          MK  L+ L+R Y+  +SP +G  CRFYPSCS Y  EA+R+HGAL+G  L  +RL +CHPW
Sbjct: 1  MKFLLIGLIRFYQYAISPLIGPRCRFYPSCSHYTLEAIRVHGALRGGYLGARRLLRCHPW 60

Query: 61 HPGGLDFVPGSEQ 73
          HPGG D VP  ++
Sbjct: 61 HPGGYDPVPERQE 73


>RSc0003 [S] COG0759 Uncharacterized conserved protein Rso Ralstonia
           solanacearum
          Length = 104

 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/102 (48%), Positives = 59/102 (57%), Gaps = 5/102 (4%)

Query: 1   MKTPLLLLLRAYKLGVSPFLGQNCRFYPSCSDYAAEAVRLHGALKGSLLAGKRLCKCHPW 60
           M   LL LLR YK+  SPF+G  CRF P+CSDYA +AV  HG   GS LA KRLC+CHP+
Sbjct: 1   MTRVLLFLLRVYKVAFSPFVGAQCRFLPTCSDYARDAVLTHGPAIGSYLAAKRLCRCHPF 60

Query: 61  HPGGLDFVPGSEQARAQAMQASSSTSAGSASGCVSDSPSTSP 102
             GG D VP      A    A  ST + S     +D+P+  P
Sbjct: 61  AQGGYDPVPP-----AAGDAALRSTDSASTETTAADAPAARP 97


>BS_ytjA [S] COG0759 Uncharacterized conserved protein Bsu Bacillus
          subtilis
          Length = 75

 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 39/73 (53%), Positives = 50/73 (68%)

Query: 1  MKTPLLLLLRAYKLGVSPFLGQNCRFYPSCSDYAAEAVRLHGALKGSLLAGKRLCKCHPW 60
          MKT  + L+R Y+  +SP     CRFYP+CS Y  EA++ HGALKG  L  KR+ KCHP+
Sbjct: 1  MKTLFIALIRGYQKFISPLTPPTCRFYPTCSQYGIEAIKTHGALKGGWLTIKRILKCHPF 60

Query: 61 HPGGLDFVPGSEQ 73
          HPGG+D VP  +Q
Sbjct: 61 HPGGVDPVPEKKQ 73


>FN0003 [S] COG0759 Uncharacterized conserved protein Fnu Fusobacterium
          nucleatum
          Length = 82

 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 52/82 (63%)

Query: 1  MKTPLLLLLRAYKLGVSPFLGQNCRFYPSCSDYAAEAVRLHGALKGSLLAGKRLCKCHPW 60
          MK  L+LL+R Y+  +SP     CRFYP+CS Y  EA++ HG +KG+ LA +R+ KCHP+
Sbjct: 1  MKKILILLIRFYQKFISPMFPAKCRFYPTCSQYTLEAIKEHGTIKGTYLAIRRILKCHPF 60

Query: 61 HPGGLDFVPGSEQARAQAMQAS 82
          H GG D VP  +   ++  +  
Sbjct: 61 HEGGYDPVPKRKNKNSEGKREE 82


>lin1778 [S] COG0759 Uncharacterized conserved protein Lin Listeria
          innocua
          Length = 88

 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 39/69 (56%), Positives = 48/69 (69%)

Query: 1  MKTPLLLLLRAYKLGVSPFLGQNCRFYPSCSDYAAEAVRLHGALKGSLLAGKRLCKCHPW 60
          MK  L+  +R Y+  +S F    CRFYP+CS Y  EA+  HGALKGS LA +R+ KCHP+
Sbjct: 1  MKKMLIGGIRLYQKYISRFTPATCRFYPTCSAYGIEAIETHGALKGSYLAIRRISKCHPF 60

Query: 61 HPGGLDFVP 69
          H GGLDFVP
Sbjct: 61 HKGGLDFVP 69