BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4166.p         (150 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA5185 [R] COG0824 Predicted thioesterase Pae Pseudomonas aerugi...   181   4e-46
MT0172 [R] COG0824 Predicted thioesterase MtC Mycobacterium tube...   139   2e-33
Rv0163 [R] COG0824 Predicted thioesterase Mtu Mycobacterium tube...   139   3e-33
PA5329 [R] COG0824 Predicted thioesterase Pae Pseudomonas aerugi...    79   5e-15
RSc1773 [R] COG0824 Predicted thioesterase Rso Ralstonia solanac...    59   3e-09

>PA5185 [R] COG0824 Predicted thioesterase Pae Pseudomonas aeruginosa
          Length = 147

 Score =  181 bits (460), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 86/141 (60%), Positives = 106/141 (75%), Gaps = 1/141 (0%)

Query: 6   PQPGRRADFLHFHAIQTRWMDNDVYGHVNNVVYYSWFDTAVNHYLVERGVLDIERGAVIG 65
           P+P  R  +LHF  I TRW DND+YGHVNNV YY++FDTAVN YL+ERG LDI+ G VIG
Sbjct: 5   PRP-LREQYLHFQPISTRWHDNDIYGHVNNVTYYAFFDTAVNTYLIERGGLDIQGGEVIG 63

Query: 66  LVIETQCNYFASVAFPDPVEVGVRVAHLGRSSVRYELGIFKAGQETAAAQGHFVHVYVDR 125
           LV+ + C+YFA VAFP  +E+G+RVA LG SSV+YEL +F  GQ  A A G FVHV+V+R
Sbjct: 64  LVVSSSCDYFAPVAFPQRIEMGLRVARLGNSSVQYELALFLEGQREACAAGRFVHVFVER 123

Query: 126 TSRRPVALPEALRSALMPLTA 146
            S RPVA+P+ LR AL  L +
Sbjct: 124 RSSRPVAIPQELRDALAALQS 144


>MT0172 [R] COG0824 Predicted thioesterase MtC Mycobacterium tuberculosis
           CDC1551
          Length = 151

 Score =  139 bits (351), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 69/138 (50%), Positives = 91/138 (65%), Gaps = 2/138 (1%)

Query: 6   PQPGRRADFLHFHAIQTRWMDNDVYGHVNNVVYYSWFDTAVNHYLVERGVLDIERGAVIG 65
           P+   R+DF     + TRW DND++GH+NN VYY  FDTA+N ++     +D     V+G
Sbjct: 7   PEKLLRSDFPVLWPVGTRWADNDMFGHLNNAVYYQLFDTAINAWINTSTGVDPLAMPVLG 66

Query: 66  LVIETQCNYFASVAFPDPVEVGVRVAHLGRSSVRYELGIFKAGQETA--AAQGHFVHVYV 123
           +V E+ C YF+ + FP+ + VGV V  LGRSSV Y LG+FK   +     A GH+VHVYV
Sbjct: 67  IVAESGCRYFSELRFPESLMVGVAVTRLGRSSVTYRLGVFKEPDDAGVITALGHWVHVYV 126

Query: 124 DRTSRRPVALPEALRSAL 141
           DRTSRRPV +PEA+RS L
Sbjct: 127 DRTSRRPVPIPEAIRSLL 144


>Rv0163 [R] COG0824 Predicted thioesterase Mtu Mycobacterium tuberculosis
           H37Rv
          Length = 151

 Score =  139 bits (349), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 68/138 (49%), Positives = 91/138 (65%), Gaps = 2/138 (1%)

Query: 6   PQPGRRADFLHFHAIQTRWMDNDVYGHVNNVVYYSWFDTAVNHYLVERGVLDIERGAVIG 65
           P+   R+DF     + TRW DND++GH+NN VYY  FDTA+N ++     +D     V+G
Sbjct: 7   PEKLLRSDFPVLWPVGTRWADNDMFGHLNNAVYYQLFDTAINAWINTSTGVDPLAMPVLG 66

Query: 66  LVIETQCNYFASVAFPDPVEVGVRVAHLGRSSVRYELGIFKAGQETA--AAQGHFVHVYV 123
           +V E+ C YF+ + FP+ + VG+ V  LGRSSV Y LG+FK   +     A GH+VHVYV
Sbjct: 67  IVAESGCRYFSELRFPESLMVGLAVTRLGRSSVTYRLGVFKEPDDAGVITALGHWVHVYV 126

Query: 124 DRTSRRPVALPEALRSAL 141
           DRTSRRPV +PEA+RS L
Sbjct: 127 DRTSRRPVPIPEAIRSLL 144


>PA5329 [R] COG0824 Predicted thioesterase Pae Pseudomonas aeruginosa
          Length = 154

 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 5/144 (3%)

Query: 9   GRRADFLHFHAIQTRWMDNDVYGHVNNVVYYSWFDTAVNHYLVERGV---LDIERGAVIG 65
            +R ++  FH+++ RW + D  G V N  Y ++ D A   Y  + G+    D+ RG    
Sbjct: 5   AQRQNYTFFHSLRVRWAEVDPQGIVFNGNYLTYLDVATTEYYRQLGMSYPADLLRGGGDL 64

Query: 66  LVIETQCNYFASVAFPDPVEVGVRVAHLGRSSVRYELGIFKAGQETAAAQGHFVHVYVDR 125
             +++   Y A   F D +++G RVA LGRSS+ +ELGI++   E     G  V+VY D 
Sbjct: 65  FAVKSTLEYRAPAHFDDWLDIGTRVARLGRSSLVFELGIWR--DEQLLTVGELVYVYADA 122

Query: 126 TSRRPVALPEALRSALMPLTALMP 149
             R+   LP+ LR  +       P
Sbjct: 123 NERQSQPLPDWLREKIRAFERQSP 146


>RSc1773 [R] COG0824 Predicted thioesterase Rso Ralstonia solanacearum
          Length = 149

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 6/143 (4%)

Query: 13  DFLHFHAIQTRWMDNDVYGHVNNVVYYSWFDTAVNHYLVERGVL----DIERGAVIGLVI 68
           DF H   ++ RW + D  G V N  Y  + D  +  Y    GV      +E   V   V+
Sbjct: 5   DFRHGTPLRVRWAEVDAQGIVFNGHYLLYADVCITEYWRAIGVRYPTEVVEAFGVDFYVV 64

Query: 69  ETQCNYFASVAFPDPVEVGVRVAHLGRSSVRYELGIFKAGQETAA--AQGHFVHVYVDRT 126
           ++   Y AS  F D +++  RVA LGRSS+R+ + I++   +  A    G  ++V  D  
Sbjct: 65  KSTLEYHASARFDDVLDLRCRVARLGRSSLRFIIEIYRGEGDDRAHLVTGEVIYVCADPA 124

Query: 127 SRRPVALPEALRSALMPLTALMP 149
           ++  V +P  LR  ++    L P
Sbjct: 125 TQTSVPVPARLRERIVDFEVLKP 147