BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4102.p (516 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll9114 [S] COG3025 Uncharacterized conserved protein Mlo Mesorh... 211 3e-54 VC2440 [S] COG3025 Uncharacterized conserved protein Vch Vibrio ... 177 5e-44 CC3522 Non COG 140 7e-33 STM3202 [S] COG3025 Uncharacterized conserved protein Sty Salmon... 117 6e-26 PM0251 [S] COG3025 Uncharacterized conserved protein Pmu Pasteur... 116 1e-25 >mll9114 [S] COG3025 Uncharacterized conserved protein Mlo Mesorhizobium loti Length = 500 Score = 211 bits (537), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 172/526 (32%), Positives = 249/526 (47%), Gaps = 65/526 (12%) Query: 2 ETELKLLLAPEHTKAFIRHPLLKRHALAAPRIKDQTGTYFDTPELLLRRHEAGLRVRRTG 61 ETELKL L+ + +R K ++P I Q YFDTP L + LR+R++G Sbjct: 20 ETELKLELSQSGAGSLLR----KNPFGSSPTILQQRSIYFDTPGWDLSKRSLSLRIRQSG 75 Query: 62 NEYIQTLKAGGGVSGGLHQRNEWESLVAGEQP--DLPVLRELAASDEAWAKKVFSDATAA 119 NE IQTLKA G + G R EWE VAG+ P D P +R+L A Sbjct: 76 NEKIQTLKAADGTAAGSFTRQEWERPVAGDTPIVDDPQIRDLRA------------GAGP 123 Query: 120 CLTPIFSTRIQRMVWDLKLDDGTEVECVLDQGLVEHGALQVEVCEIELELKSGQAASLFD 179 L P+F ++R W++ D T +E LD G V + +CEIELE K+G +LF Sbjct: 124 ELAPLFEVHVKRHRWNVVDGDAT-LEVTLDLGKVVAADREAPLCEIELEKKAGSPTALFA 182 Query: 180 FALQLLQDLPLRIGIQSKAQRGYALFHQARRGDAAASSSASRAKPLLLTRKMPLEQAFLA 239 A ++ P +G+ SKA+RGY L A A++ + LT +M AF+ Sbjct: 183 LARKVDLITPAHLGVLSKAERGYRLLGSA--------PGAAKTASIPLTCEMSAATAFVR 234 Query: 240 VVSNCLEQIQANDIADQDSGDIERLHQMRVGLRRLRSAFTLFHEVIALPAALSAQFD--- 296 + + CL Q + N++ S D E LHQ RV LRRLRS ++ + ++FD Sbjct: 235 IATACLRQFRLNEMVLSWSRDAEALHQARVSLRRLRSLCSICKSLFD-----DSRFDHMR 289 Query: 297 ----WAAEAIGVARDWDVLATQTLSALPAAEIDSIDLERVRKAALIEAGKEHAQAVQAVA 352 W A G AR+ DV+ + ++E S L+ R+ A +A +++ Sbjct: 290 EELTWLASEFGDARNIDVMIDRA-----SSEALSSRLQDAREDA-------YAAVEASLS 337 Query: 353 SPRYTALVLQFSRWLLQAGWREGLDEHGLQTLTQPLSR-FAHQMLRRDEKRLNKRGEHLE 411 S R AL++ + W+ WR + +TL + SR FA + + K++ K G L Sbjct: 338 SARARALMIDAAEWISIRSWRA---DQADETLHEHSSRGFASGVFDKLWKKVAKGGSDLI 394 Query: 412 DS-DRARHRTRIAAKKMRYDIEFFLALYGEKSS----RPYLKALSRLQDQLGLQNDLVVA 466 D+ D RH RI AKK+RY EFF LY K+ R +++A+ LQD LG NDL A Sbjct: 395 DADDETRHEVRIVAKKLRYAAEFFQPLYKSKAEAKRHRRFIRAMEDLQDNLGRLNDLATA 454 Query: 467 DALLQQLQHKHTRLAPSIGYARGYL-----AGQMRDGHERTRRLWK 507 +L L+ A + A A + D TRR W+ Sbjct: 455 PGMLAALELSDMAGAKDLFSAEDKSKLLEDAAEAHDALVNTRRFWR 500 >VC2440 [S] COG3025 Uncharacterized conserved protein Vch Vibrio cholerae Length = 505 Score = 177 bits (449), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 125/406 (30%), Positives = 201/406 (49%), Gaps = 28/406 (6%) Query: 2 ETELKLLLAPEHT---KAFIRHPLLKRHALAAPRIKDQTGTYFDTPELLLRRHEAGLRVR 58 E ELK ++P+ + +A I + +H+ ++ TYFDTP+ LR+H+ GLR+R Sbjct: 4 EIELKFFVSPDFSTILRAKISETKVLQHS-----CRELGNTYFDTPDNWLRQHDIGLRIR 58 Query: 59 RTGNEYIQTLKAGGGVSGGLHQRNEWESLVAGEQPDLPVLRELAASDEAWAKKVFSDATA 118 R Y+QT+K G V GLHQR E+ + +PDL L +D W + Sbjct: 59 RFDEVYVQTVKTAGRVVAGLHQRPEFNAEHHSNEPDL----SLHPAD-IWPQGKELTQLQ 113 Query: 119 ACLTPIFSTRIQRMVWDLKLDDGTEVECVLDQGLVEHGALQVEVCEIELELKSGQAASLF 178 A L P+FST R W + + DG++VE DQGLV G Q +CE+ELELKSGQ +LF Sbjct: 114 AELMPLFSTNFTREQWLISMADGSQVEVAFDQGLVVAGDRQEPICEVELELKSGQTDALF 173 Query: 179 DFALQLLQDLPLRIGIQSKAQRGYALFHQARRGDAAASSSASRAKPLLLT---RKMPLEQ 235 A QL + +R+G SKA RGY L AA+ S +P+ L + E Sbjct: 174 TLARQLCEHGGMRLGNLSKAARGYRL---------AANYSGDEIQPMALVSVDKNDTAES 224 Query: 236 AFLAVVSNCLEQIQANDIADQDSGDIERLHQMRVGLRRLRSAFTLFHEVIA--LPAALSA 293 F+ + + L ++ + ++ LH++R + LR +++ +I A L Sbjct: 225 CFIRALEHALAHWHYHEQIYTERENVAALHEIRHAVSYLRQLLSVYGGIIPRRASAILRQ 284 Query: 294 QFDWAAEAIGVARDWDVLAT-QTLSALPAAEIDSIDLERVRKAALIEAGKEHAQAVQAVA 352 + W + + ++++ L + Q ++D+ L E+ + ++ ++ Sbjct: 285 ELKWLEQELQWLKEFEYLESLQEDKGYALRKLDARKFLVTALKTLQESLPQREDTLRLLS 344 Query: 353 SPRYTALVLQFSRWLLQAGWREGLDEHGLQTLTQPLSRFAHQMLRR 398 S RYT L+L SRW+L GW+ LD+ + + QPL F+ + L R Sbjct: 345 SARYTGLLLDLSRWVLTRGWQPFLDDKAREKMAQPLEAFSVKQLDR 390 >CC3522 Non COG Length = 509 Score = 140 bits (353), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 157/491 (31%), Positives = 225/491 (45%), Gaps = 47/491 (9%) Query: 2 ETELKLLLAPEHTKAFIRHPLLKRHALAAPRIKDQTGTYFDTPELLLRRHEAGLRVRRTG 61 E ELK L+ PE +A + +L ++ TY+DT + LRR GLRVR Sbjct: 22 EIELKFLIPPEAAEAIL--DVLDGEGA----VRQLDATYYDTADHALRRAGFGLRVRDGE 75 Query: 62 NEYIQTLKAGGGVSGGLHQRNEWESLVAGEQPDLPVLRELAASDEAWAKKVFSDATA-AC 120 QTLK+ +GG+ R EWE +AG PD +A A+ + A A Sbjct: 76 GGRKQTLKSAS--AGGVFSRGEWEETIAGPTPD----------RDALARTPVGEMLAEAA 123 Query: 121 LTPIFSTRIQRMVWDLKLDDGTEVECVLDQGLVEHGALQVEVCEIELELKSGQAASLFDF 180 L P+F+ R++R + + + T +E LD+G + G Q VCE+ELELK+G+ +LFD Sbjct: 124 LAPVFTARVERTIRMVAAGE-TLIEVALDRGELSAGERQATVCELELELKTGEPQALFDL 182 Query: 181 ALQLLQDLPLRIGIQSKAQRGYALFH-----QARRGDAAASSSASRAKPLLLTRKMPLEQ 235 A L + PLR+ + SKA+RGY L + RR AA AS L + Q Sbjct: 183 ARTLARHAPLRLSLISKAERGYGLAAGDAAPRVRRQTAALGPEASVEAAL-----QAIGQ 237 Query: 236 AFLAVVSNCLEQIQANDIADQDSGDIERLHQMRVGLRRLRSAFTLFHEV--IALPAALSA 293 A LA + LE ++ D +HQ RV RRLR+ +F + A AL A Sbjct: 238 AGLAHLCAALEALRERPAPDS-------VHQARVAARRLRAMLKIFKPLSRDAAALALDA 290 Query: 294 QFDWAAEAIGVARDWDVLATQTLSALPAAEIDSIDLERVRKAALIEAGKEHAQAVQAVAS 353 + DW A + ARD DV + A ER KAA A + + A+ S Sbjct: 291 ELDWLAGELDAARDLDVFVGEVWEGSAATFEGREAFERGLKAARATA---YLRMEAALES 347 Query: 354 PRYTALVLQFSRWLLQAGWREGLDEHGLQTLTQPLSRFAHQMLRRDEKRLNKRGEHLEDS 413 PR ++L+ + WL W L+T+ + +A L R +R+ K +H + Sbjct: 348 PRARDVLLEAAAWLEAGAWTSDPALAELRTIAA--AAYAADRLDRLRRRMKKGAKHFDAL 405 Query: 414 D-RARHRTRIAAKKMRYDIEFFLALYGEKSSRP--YLKALSRLQDQLGLQNDLVVADALL 470 D ARHR R+ K +RY E L+ R +L A +QD LG+ ND + L+ Sbjct: 406 DAHARHRLRLKGKTLRYAAEDLAPLFPNHPRRAERFLAAAKAVQDTLGVLNDRAIRRDLV 465 Query: 471 QQLQHKHTRLA 481 H LA Sbjct: 466 NSCVHGDATLA 476 >STM3202 [S] COG3025 Uncharacterized conserved protein Sty Salmonella typhimurium LT2 Length = 433 Score = 117 bits (293), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 129/441 (29%), Positives = 189/441 (42%), Gaps = 64/441 (14%) Query: 40 YFDTPELLLRRHEAGLRVRRTGNEYIQTLKAGGGVSGGLHQRNEWESLVAGEQPDLPVLR 99 YF+TP+ LRRH+ GLR+R Y T+K G V+GGLHQR E+ VA +P L L Sbjct: 40 YFETPDNWLRRHDMGLRIRGENGRYEMTMKIAGRVTGGLHQRPEYN--VALSEPVLD-LT 96 Query: 100 ELAASDEAWAKKVFSDATAACLTPIFSTRIQRMVWDLKLDDGTEVECVLDQGLVEHGALQ 159 +L A E W A+ + P+FST R W L + DG+ +E LD G V+ G Sbjct: 97 QLPA--EVWPDGNLPAGLASSVQPLFSTDFYREKWCLDV-DGSRIEIALDLGDVKAGEFA 153 Query: 160 VEVCEIELELKSGQAASLFDFALQLLQDLPLRIGIQSKAQRGYALFHQARRGDAAASSSA 219 +CE+ELEL G ++ A QLL LR G SKA RGY L +G+A ++ Sbjct: 154 EPICELELELLRGDTRAVLKLAKQLLSQTGLRQGSLSKAARGYHL----AQGNAPRENTP 209 Query: 220 SRAKPLLLTRKMPLEQAFLAVVSNCLEQIQANDIADQDSGDIERLHQMRVGLRRLRSAFT 279 + L K +EQ A + L Q Q ++ GD + + +R A Sbjct: 210 TTI--LRTAAKATVEQGLEASLDLALSQWQYHEEL-WLRGDKSAKEHVLDAMGLVRHALM 266 Query: 280 LFHEVIALPAALSAQFDWAAEAIGVARDWDVLATQTLSALPAAEIDSIDLERVRKAALIE 339 LF ++ P SA RD L TQ + + +A Sbjct: 267 LFGGIV--PRKASAHL----------RD---LLTQAEATMTSA----------------- 294 Query: 340 AGKEHAQAVQAVASPRYTALVLQFSRWLLQAGWREGLDEHGLQTLTQPLSRFAHQMLRRD 399 AV AV S + L + WL+ W+ LD + RFA L R Sbjct: 295 -----VSAVTAVYSTQTAMAKLALTEWLVTKAWQPFLDAKAQAKMADSFKRFADIHLSRH 349 Query: 400 EKRLNKR-GEHLEDSDRARHRTRIAAKKMRYDIEFFLALYGEKSSRPYLKALSRLQDQLG 458 L K G+ L D + R ++ DI+ L L G + + A + L++ G Sbjct: 350 AAELKKVFGQPLGD------KYRDQLPRLTRDIDSVLLLAGYYDA---MVAQAWLENWQG 400 Query: 459 LQNDLVVADALLQQLQHKHTR 479 L++ ++ Q+++ +H R Sbjct: 401 LRHAIITG----QRIEIEHFR 417 >PM0251 [S] COG3025 Uncharacterized conserved protein Pmu Pasteurella multocida Length = 356 Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 102/203 (50%), Gaps = 9/203 (4%) Query: 2 ETELKLLLAPEHTKAFIRHPLLKRHALAAPRIKDQTGTYFDTPELLLRRHEAGLRVRRTG 61 E ELKL + P+ A + H L + A TY+DT + +L +H+ GLRVR+ Sbjct: 4 EVELKLAVTPKF--ADLLHQELTNFRILAHNTIFLANTYYDTADRVLAKHKMGLRVRQEN 61 Query: 62 NEYIQTLKAGGGVSGGLHQRNEWESLVAGEQPDLPVLRELAASDEAWAKKVFSDATAACL 121 +Y TLK G V GGLH R E+ + QP++ +L E A + L Sbjct: 62 QQYTLTLKTDGEVHGGLHIRPEYNVTLPDAQPNISLLVEKYA-------LTLPNYAQWEL 114 Query: 122 TPIFSTRIQRMVWDLKLDDGTEVECVLDQGLVEHGALQVEVCEIELELKSGQAASLFDFA 181 P+FST +R W ++ +GT +E DQG + G Q +CE+E ELKSG L F Sbjct: 115 KPVFSTDFERESWLIECGNGTHIEVAFDQGKIVAGEKQTPICEVEFELKSGLPIDLLRFV 174 Query: 182 LQLLQDLPLRIGIQSKAQRGYAL 204 L + +R+ SKA+RGY L Sbjct: 175 QTLTLENEIRLSSASKAKRGYLL 197