BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4074.p (262 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value NMB0073 [GM] COG1682 ABC-type polysaccharide/polyol phosphate ex... 231 1e-60 PM0780 [GM] COG1682 ABC-type polysaccharide/polyol phosphate exp... 214 2e-55 NMA0196 [GM] COG1682 ABC-type polysaccharide/polyol phosphate ex... 201 1e-51 SMb20833 [GM] COG1682 ABC-type polysaccharide/polyol phosphate e... 89 1e-17 SMb20822 [GM] COG1682 ABC-type polysaccharide/polyol phosphate e... 72 1e-12 >NMB0073 [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component Nme Neisseria meningitidis MC58 Length = 265 Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 110/260 (42%), Positives = 168/260 (64%) Query: 1 MHPPSLWHSLRIQVRVIAALLLREVITRYGRHGIGVLWVFVEPMLFTLGITALWYAVGLH 60 +H S W SL IQ RVI ALL+RE+ITRYGR+ IG LW+FVEP+L T I +W + Sbjct: 4 LHKTSFWESLAIQRRVIGALLMREIITRYGRNNIGFLWLFVEPLLMTFVIVLMWKFLRAD 63 Query: 61 TVVPIPIVAFAVTGYSSVLIWRTATNRCAKAIEPNLGLLHHRNVKIIDLLITRVLLELVG 120 + IVAFA+TGY +++WR A+ R +I N LL+HRNV+++D ++ R++LE+ G Sbjct: 64 RYSTLNIVAFAITGYPMLMMWRNASKRAVGSISSNASLLYHRNVRVLDTILARMILEIAG 123 Query: 121 GTASFVLLALIFFLVDTMPLPEDLLTVLLGWLLLGWLALALGFIVGALSERSDTFERIWQ 180 T + +++ + + + +P D+ +L+ WLL+ + A+ LG ++ +++ + F +IW Sbjct: 124 ATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFFAIGLGLVICSIAFNFEPFGKIWG 183 Query: 181 VANYLLFPISGAVYMVDWLPRFLQEVVLLLPMVHGVEMIRHGYWGGLLPTHENPAYLVAC 240 +++ P+SGA + V LP +QE L++PMVHG EM R GY+G + T+ENP Y+V C Sbjct: 184 TLTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHGTEMFRAGYFGSDVITYENPWYIVLC 243 Query: 241 NLVLTLMGLALVRASENKVE 260 NLVL L GLA+V VE Sbjct: 244 NLVLLLFGLAMVSKFSKGVE 263 >PM0780 [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component Pmu Pasteurella multocida Length = 265 Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 105/256 (41%), Positives = 162/256 (63%) Query: 5 SLWHSLRIQVRVIAALLLREVITRYGRHGIGVLWVFVEPMLFTLGITALWYAVGLHTVVP 64 +L H+ IQ RVI ALL+RE+ITRYGR +G LW+FVEP+L T I LW Sbjct: 8 TLKHAFIIQNRVIGALLMREIITRYGRKNLGFLWLFVEPLLMTGLIMILWSTFRADQFSN 67 Query: 65 IPIVAFAVTGYSSVLIWRTATNRCAKAIEPNLGLLHHRNVKIIDLLITRVLLELVGGTAS 124 + I+AF +TGY +++WR A+NR A+ N LL+HRNV+++D LI R++LE+ G T + Sbjct: 68 LNIMAFMITGYPLMMMWRNASNRAIGAVSANSTLLYHRNVRVLDTLIVRMILEISGATIA 127 Query: 125 FVLLALIFFLVDTMPLPEDLLTVLLGWLLLGWLALALGFIVGALSERSDTFERIWQVANY 184 V+L +D +P+P+D+ +LL W L+ A+ GFI+ ++S + F ++W + ++ Sbjct: 128 QVVLMSFCIALDWIPMPQDIFYMLLAWFLMAIFAIGFGFIICSISHHIEVFGKLWGILSF 187 Query: 185 LLFPISGAVYMVDWLPRFLQEVVLLLPMVHGVEMIRHGYWGGLLPTHENPAYLVACNLVL 244 + P+SG + V LP +E +L +PM+HG EM RHGY+G + T ENP +L+ C+L+ Sbjct: 188 AMMPLSGTFFFVYNLPPQAREYLLWMPMIHGSEMFRHGYFGDSVITLENPYFLILCDLIF 247 Query: 245 TLMGLALVRASENKVE 260 L+GL +V +E Sbjct: 248 LLIGLLMVAHFSKGIE 263 >NMA0196 [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component NmA Neisseria meningitidis Z2491 Length = 265 Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 99/237 (41%), Positives = 154/237 (64%) Query: 1 MHPPSLWHSLRIQVRVIAALLLREVITRYGRHGIGVLWVFVEPMLFTLGITALWYAVGLH 60 +H S SL IQ RVI ALL+RE+ITRYGR+ IG LW+FVEP+L TL + +W +H Sbjct: 4 LHKTSFLESLLIQKRVIGALLMREIITRYGRNNIGFLWLFVEPLLLTLVMVLMWKFFRMH 63 Query: 61 TVVPIPIVAFAVTGYSSVLIWRTATNRCAKAIEPNLGLLHHRNVKIIDLLITRVLLELVG 120 V + IVAF +TGY +++WR A+N +I N LL+HRNV+++D + R+LLE+ G Sbjct: 64 NVSALNIVAFTLTGYPMMMMWRNASNHAIGSISANTSLLYHRNVRVLDTIFARMLLEIAG 123 Query: 121 GTASFVLLALIFFLVDTMPLPEDLLTVLLGWLLLGWLALALGFIVGALSERSDTFERIWQ 180 T + V++ ++ + +P D+ +LL WLL+ A+ LG ++ +++ + F ++W Sbjct: 124 ATIAQVVIMFALVIIGWIDVPADIFYMLLAWLLMAMFAVGLGLVICSVAFHFEPFGKVWS 183 Query: 181 VANYLLFPISGAVYMVDWLPRFLQEVVLLLPMVHGVEMIRHGYWGGLLPTHENPAYL 237 ++++ P+SG + V LP+ LQ VL++PMVHG EM R GY+G + T+ENP Y+ Sbjct: 184 TISFVMMPLSGVFFFVHNLPQQLQHYVLMIPMVHGTEMFRAGYFGDSVTTYENPWYI 240 >SMb20833 [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component Sme Sinorhizobium meliloti Length = 259 Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 4/217 (1%) Query: 10 LRIQVRVIAALLLREVITRYGRHGIGVLWVFVEPMLFTLGITALWYAVGLHTVVPIPIVA 69 L RV+ ALL+RE+ TR+G G +W ++P L +T ++ A+ + Sbjct: 7 LTTHFRVVGALLVREMATRFGSKPGGYVWALLDPAAHILLMTVIFQAIARAPALGTSFAL 66 Query: 70 FAVTGYSSVLIWRTATNRCAKAIEPNLGLLHHRNVKIIDLLITRVLLELVGGTASFVLLA 129 F TGY + ++ T A++ N LL + NV ID ++ R +L++ GT S V Sbjct: 67 FFATGYIAFQFYQAMTGYLNAAVKANKALLSYPNVAPIDTIVARFVLQM--GTTSLVAFI 124 Query: 130 LIFFLVDTMPLPEDL--LTVLLGWLLLGWLALALGFIVGALSERSDTFERIWQVANYLLF 187 ++ +V TM + D+ ++L L L + + L + +E+++ + N LF Sbjct: 125 VLGTIVATMRVDTDIHWPSILEAVGLACLFGLGVAMVNCVLFLKYPLYEQVFSIVNRPLF 184 Query: 188 PISGAVYMVDWLPRFLQEVVLLLPMVHGVEMIRHGYW 224 ISG ++ D +P +++VL+ P+VH + R G++ Sbjct: 185 LISGVFFLPDSIPAPYRDLVLINPLVHVIMGFRKGFY 221 >SMb20822 [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component Sme Sinorhizobium meliloti Length = 274 Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/251 (23%), Positives = 118/251 (47%) Query: 10 LRIQVRVIAALLLREVITRYGRHGIGVLWVFVEPMLFTLGITALWYAVGLHTVVPIPIVA 69 ++ +RV AAL++RE+ TR+G G LW +P+ +T ++ A+ + + Sbjct: 20 IQQHLRVTAALIVREMSTRFGSKPGGYLWAIFDPVAHVALMTLIFQAIARMPALGLSFPL 79 Query: 70 FAVTGYSSVLIWRTATNRCAKAIEPNLGLLHHRNVKIIDLLITRVLLELVGGTASFVLLA 129 F +GY ++ ++ A ++ N L + V D +++R +L+L+ T +L+ Sbjct: 80 FFASGYLPFAFYQRMSSFMAGTVKANKALFSYPIVTPFDAIVSRFILQLMTDTLVTILIL 139 Query: 130 LIFFLVDTMPLPEDLLTVLLGWLLLGWLALALGFIVGALSERSDTFERIWQVANYLLFPI 189 ++ + + P +L ++ L L +G I + R +E+I+ + N LF I Sbjct: 140 MMIIELGGVTQPMNLGGMIEAAGAAALLGLGIGTINIVMFARFSLYEQIFGIINRPLFMI 199 Query: 190 SGAVYMVDWLPRFLQEVVLLLPMVHGVEMIRHGYWGGLLPTHENPAYLVACNLVLTLMGL 249 SG ++ + LP ++ +L P+VH + R + + Y++ LV + GL Sbjct: 200 SGVFFLPESLPHPFRDFLLYNPLVHVIMWFRASIYPEYRADLLDKGYVIEFALVCFVAGL 259 Query: 250 ALVRASENKVE 260 L+ S ++ Sbjct: 260 LLLTTSMREIR 270