BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.4062.p         (482 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPO2277 Non COG                                                        85   4e-16

>YPO2277 Non COG
          Length = 570

 Score = 84.7 bits (208), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 99/238 (41%), Gaps = 45/238 (18%)

Query: 244 LEPAPTMSAADAAKSLSSSDLAAPLPTQPIADIANAAWRSAAGSSGYDGLPYDASNPI-T 302
           LE     S  D  + L S  ++  L    +AD+ N  W  AA ++ Y+GLP+   +P   
Sbjct: 375 LEAGNIESMIDYLEYLDSVSVSPAL----LADMINELWSEAAVNADYNGLPFKEVSPAEV 430

Query: 303 TGDVSNWQSSHPDYWPTVGDFVTPQQASPVDPATGNVTNPIPSSGPVSSSPAGLSPFGLP 362
           T  +S  + S     PT+ D ++P      D A  +V   I  +                
Sbjct: 431 TSAMSELRLS-----PTLLDMLSPVS----DSAGADVNIDITINN--------------- 466

Query: 363 TSSTPQSSVDPSSSAPNTGTNPSNQPLENLGPDPGIGAPSLEPIPTATQIIAPTRNIFPT 422
                           N+G++  N    +LG DPG+  P LE  PTA  I+ P  N+ P 
Sbjct: 467 ----------------NSGSDTGNNGNIDLGEDPGLKEPELEETPTARDILTPIINLLPF 510

Query: 423 LKSFVVPSVDVQCPTWSVPVFGKDIAFKDHCPLLEQSRSSLYAAMAVVYALLALFIVL 480
              F + S    CP     VF        HCPL+EQ+RS++     +++  +AL I+L
Sbjct: 511 TNEFNIGSRSASCPVVEFSVFNHQYRIDSHCPLIEQNRSAVETIFLIIWGFVALRIIL 568