BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.4033.p (264 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1738 [R] COG1101 ABC-type uncharacterized transport system, A... 429 e-120 PA3838 [R] COG1101 ABC-type uncharacterized transport system, AT... 400 e-111 VC1103 [R] COG1101 ABC-type uncharacterized transport system, AT... 342 4e-94 AGc4841 [R] COG1101 ABC-type uncharacterized transport system, A... 326 4e-89 SMc03828 [R] COG1101 ABC-type uncharacterized transport system, ... 320 1e-87 >RSc1738 [R] COG1101 ABC-type uncharacterized transport system, ATPase component Rso Ralstonia solanacearum Length = 264 Score = 429 bits (1104), Expect = e-120, Method: Compositional matrix adjust. Identities = 214/264 (81%), Positives = 231/264 (87%) Query: 1 MLKATDLKITFNPGTPIENPALRGLSLEVPTGQFVAVIGSNGAGKSTFLNAISGDLLVDS 60 ML A L +TFN GTPIE ALRGLSLE+PTGQFV VIGSNGAGKSTFLN+ISGD +VD+ Sbjct: 1 MLSAQGLTLTFNAGTPIETRALRGLSLEIPTGQFVTVIGSNGAGKSTFLNSISGDQMVDA 60 Query: 61 GKIEIDGTDVTRKQAWDRAGMVARVFQDPMAGTCEALTIEENMALAMARGRRRGFQFAIR 120 G+I IDG DVTRK AW RA +VARVFQDPMAGTCE LTIEENM+LAM RG+RRGF FA Sbjct: 61 GRITIDGIDVTRKTAWQRANLVARVFQDPMAGTCENLTIEENMSLAMCRGQRRGFGFATN 120 Query: 121 GKMRELFREKLAILNLGLENRLTDRIGLLSGGQRQAVSLLMASLQPSRILLLDEHTAALD 180 K RE+FR +L L+LGLENRLTDRIGLLSGGQRQAVSLLMASLQPSRILLLDEHTAALD Sbjct: 121 RKWREVFRAQLRRLDLGLENRLTDRIGLLSGGQRQAVSLLMASLQPSRILLLDEHTAALD 180 Query: 181 PKTAAFVLELTAKIVAEGKLTTMMVTHSMRQALDYGDRTVMLHQGRVVLDVSGPERAGLD 240 PKTAAFVLELTAKIV+E KLTTMMVTHSMRQALDYG RTVMLHQG V+LDV G ERAGLD Sbjct: 181 PKTAAFVLELTAKIVSESKLTTMMVTHSMRQALDYGQRTVMLHQGNVILDVQGGERAGLD 240 Query: 241 VPDLLKMFEQTRGEKLSDDALLLG 264 VP LL+ FE+TRG K+ DDALLLG Sbjct: 241 VPHLLQKFEETRGAKVDDDALLLG 264 >PA3838 [R] COG1101 ABC-type uncharacterized transport system, ATPase component Pae Pseudomonas aeruginosa Length = 264 Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust. Identities = 209/264 (79%), Positives = 226/264 (85%) Query: 1 MLKATDLKITFNPGTPIENPALRGLSLEVPTGQFVAVIGSNGAGKSTFLNAISGDLLVDS 60 ML A +LKITFNPGTPIE ALRGLSL++P GQFV VIGSNGAGKSTFLNA+SGDL +DS Sbjct: 1 MLSAKNLKITFNPGTPIETRALRGLSLDIPAGQFVTVIGSNGAGKSTFLNAVSGDLPIDS 60 Query: 61 GKIEIDGTDVTRKQAWDRAGMVARVFQDPMAGTCEALTIEENMALAMARGRRRGFQFAIR 120 G+I ID DVTRK W RA VARVFQDPMAGTCE LTIEENMALA RG RG A++ Sbjct: 61 GQILIDDEDVTRKPVWARANRVARVFQDPMAGTCEDLTIEENMALAQRRGAGRGLGRAVQ 120 Query: 121 GKMRELFREKLAILNLGLENRLTDRIGLLSGGQRQAVSLLMASLQPSRILLLDEHTAALD 180 MR+ FRE LA L LGLENRL DRIGLLSGGQRQAVSLLMA+LQPSRILLLDEHTAALD Sbjct: 121 ASMRDGFRESLATLGLGLENRLGDRIGLLSGGQRQAVSLLMAALQPSRILLLDEHTAALD 180 Query: 181 PKTAAFVLELTAKIVAEGKLTTMMVTHSMRQALDYGDRTVMLHQGRVVLDVSGPERAGLD 240 P+TA FVL LTA+IVAE KLTTMMVTHSMRQALD G+RTVMLHQG+VVLDVSG +R GLD Sbjct: 181 PRTADFVLHLTARIVAEKKLTTMMVTHSMRQALDVGERTVMLHQGQVVLDVSGEQRKGLD 240 Query: 241 VPDLLKMFEQTRGEKLSDDALLLG 264 VPDLL MFE+ RGEKL+DDALLLG Sbjct: 241 VPDLLAMFEKVRGEKLADDALLLG 264 >VC1103 [R] COG1101 ABC-type uncharacterized transport system, ATPase component Vch Vibrio cholerae Length = 264 Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 165/263 (62%), Positives = 214/263 (81%) Query: 1 MLKATDLKITFNPGTPIENPALRGLSLEVPTGQFVAVIGSNGAGKSTFLNAISGDLLVDS 60 M++ D+++TFNPGT +EN ALRG+SLEVP QF+ VIGSNGAGKST L A++G+ + Sbjct: 1 MIRLQDIQVTFNPGTILENRALRGVSLEVPEHQFLTVIGSNGAGKSTLLGAVTGETPIVG 60 Query: 61 GKIEIDGTDVTRKQAWDRAGMVARVFQDPMAGTCEALTIEENMALAMARGRRRGFQFAIR 120 G++ ID DVT++ RA + ARVFQDP+AGTC ALTIEENMALA RG++RG+ A+ Sbjct: 61 GQVLIDEIDVTKQSVDQRANLCARVFQDPLAGTCGALTIEENMALAYMRGKKRGWSLALS 120 Query: 121 GKMRELFREKLAILNLGLENRLTDRIGLLSGGQRQAVSLLMASLQPSRILLLDEHTAALD 180 + R+LF+E+++IL LGLE+RL D IGLLSGGQRQAVSL+MA+L S++LLLDEHTAALD Sbjct: 121 NQRRKLFQERISILGLGLEDRLGDNIGLLSGGQRQAVSLVMATLSESKLLLLDEHTAALD 180 Query: 181 PKTAAFVLELTAKIVAEGKLTTMMVTHSMRQALDYGDRTVMLHQGRVVLDVSGPERAGLD 240 P+ AAF+++LT KIV E LT MMVTHSM+ AL GDRTVMLHQG++VLDV+G +RA + Sbjct: 181 PRMAAFIIDLTKKIVKEFNLTVMMVTHSMKDALACGDRTVMLHQGQIVLDVTGEQRANMG 240 Query: 241 VPDLLKMFEQTRGEKLSDDALLL 263 VP+LL+MF + RGE+L+DD+LLL Sbjct: 241 VPELLEMFSKVRGEELADDSLLL 263 >AGc4841 [R] COG1101 ABC-type uncharacterized transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 264 Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 163/264 (61%), Positives = 201/264 (76%) Query: 1 MLKATDLKITFNPGTPIENPALRGLSLEVPTGQFVAVIGSNGAGKSTFLNAISGDLLVDS 60 M+ +D+++ F GTP++ AL + L + G FV VIGSNGAGKST L ++GD+L + Sbjct: 1 MISLSDIQVVFGRGTPLQKQALAKIDLTIEDGSFVTVIGSNGAGKSTLLGVLAGDVLPTA 60 Query: 61 GKIEIDGTDVTRKQAWDRAGMVARVFQDPMAGTCEALTIEENMALAMARGRRRGFQFAIR 120 GK+ I G DVTRK RAG VARVFQDP+AG+C ALTIEEN+ALA +RG RRG A+ Sbjct: 61 GKVMIGGADVTRKPTASRAGRVARVFQDPLAGSCGALTIEENLALAASRGERRGLSSALG 120 Query: 121 GKMRELFREKLAILNLGLENRLTDRIGLLSGGQRQAVSLLMASLQPSRILLLDEHTAALD 180 R+ FRE++A LNLGLENRL DR+ LLSGGQRQAVSL+MA+L S +LLLDEHTAALD Sbjct: 121 RGRRDFFRERIASLNLGLENRLKDRMDLLSGGQRQAVSLVMATLSGSDVLLLDEHTAALD 180 Query: 181 PKTAAFVLELTAKIVAEGKLTTMMVTHSMRQALDYGDRTVMLHQGRVVLDVSGPERAGLD 240 P A FV+ELT K+V+E KLTT+MVTHSMRQALDYG RT+MLH G +VLDVSG R L+ Sbjct: 181 PGMAEFVMELTRKVVSERKLTTLMVTHSMRQALDYGTRTIMLHAGEIVLDVSGDSRKDLE 240 Query: 241 VPDLLKMFEQTRGEKLSDDALLLG 264 V DL++MF + RG+ L DD LL+G Sbjct: 241 VEDLIEMFRKIRGQTLDDDELLIG 264 >SMc03828 [R] COG1101 ABC-type uncharacterized transport system, ATPase component Sme Sinorhizobium meliloti Length = 264 Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 160/264 (60%), Positives = 199/264 (75%) Query: 1 MLKATDLKITFNPGTPIENPALRGLSLEVPTGQFVAVIGSNGAGKSTFLNAISGDLLVDS 60 M+ ++++ F GTP++ AL G+SL + G FV VIGSNGAGKST L ++GD+L Sbjct: 1 MINVENIQVVFGKGTPLQKQALNGVSLTIEEGSFVTVIGSNGAGKSTLLGVLAGDVLPSG 60 Query: 61 GKIEIDGTDVTRKQAWDRAGMVARVFQDPMAGTCEALTIEENMALAMARGRRRGFQFAIR 120 G++ I TDVTRK RAG+VARVFQDP+AG+C AL+IEEN+ALA RG RG A+ Sbjct: 61 GRVTIGTTDVTRKGTAARAGLVARVFQDPLAGSCGALSIEENLALAARRGESRGLTPALG 120 Query: 121 GKMRELFREKLAILNLGLENRLTDRIGLLSGGQRQAVSLLMASLQPSRILLLDEHTAALD 180 K RE FRE++A LNLGLENR+ DR+ LLSGGQRQAVSL+MA+L S +LLLDEHTAALD Sbjct: 121 SKRREHFRERIAELNLGLENRMRDRMDLLSGGQRQAVSLVMATLAGSEVLLLDEHTAALD 180 Query: 181 PKTAAFVLELTAKIVAEGKLTTMMVTHSMRQALDYGDRTVMLHQGRVVLDVSGPERAGLD 240 P A F++ LT KIV+E KLTT+MVTHSMRQALD+G RT+MLH G +VLDV+G R L Sbjct: 181 PGMAEFIMNLTQKIVSERKLTTLMVTHSMRQALDFGHRTIMLHGGEIVLDVAGDSRKTLQ 240 Query: 241 VPDLLKMFEQTRGEKLSDDALLLG 264 V DL+ MF + RG+ L DDALL+G Sbjct: 241 VEDLIAMFRRIRGQTLDDDALLIG 264