BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3972.p (267 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2962 [Q] COG1127 ABC-type transport system involved in resist... 367 e-101 NMB1966 [Q] COG1127 ABC-type transport system involved in resist... 317 2e-86 NMA0485 [Q] COG1127 ABC-type transport system involved in resist... 316 3e-86 VC2520 [Q] COG1127 ABC-type transport system involved in resista... 311 1e-84 PA4456 [Q] COG1127 ABC-type transport system involved in resista... 309 5e-84 >RSc2962 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Rso Ralstonia solanacearum Length = 279 Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust. Identities = 182/264 (68%), Positives = 215/264 (81%), Gaps = 2/264 (0%) Query: 4 IVEIRDLHFRY--GDRPILTGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLQPQQGRV 61 +VE+ + F Y G R IL+GL M P+G VVAVMGGSG GKTT+LRLIGGQ+ G V Sbjct: 9 VVELDQVDFAYQPGARRILSGLCMRVPKGSVVAVMGGSGCGKTTVLRLIGGQVAAASGAV 68 Query: 62 EVDGENVPSLATKQLYLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDDTLIRDLV 121 V G ++ ++ LY RR+MGMLFQ GALF+DM+VFDNVAFPLREHT+L D LIRDLV Sbjct: 69 RVHGADIGAMDKPALYAARRQMGMLFQFGALFSDMSVFDNVAFPLREHTELPDLLIRDLV 128 Query: 122 LMKLNAVGLRNAAALKPAEISGGMARRVALARAIALDPALIMYDEPFAGLDPISMGVTAN 181 LMKLNAVGLR A L P++ISGGMARRVALARAIALDP+LI+YDEPFAGLDPIS+G+TA+ Sbjct: 129 LMKLNAVGLRGARDLMPSQISGGMARRVALARAIALDPSLILYDEPFAGLDPISLGLTAS 188 Query: 182 LIRRLNDALGSTSILVSHDVNESFAIADYVYFLSAGKIVAQGTPQEMRESTDPYVKQFVH 241 LIR LNDALG+TSI+VSHDV E+F IADYVYF++ G I A+GTP E+ STDP+V+QFVH Sbjct: 189 LIRSLNDALGATSIIVSHDVQETFQIADYVYFVANGGIAAEGTPAELSASTDPFVRQFVH 248 Query: 242 AQADGPVPFHYPGKSLAEDLGLGG 265 + DGPVPFHYPG LAED G+GG Sbjct: 249 GEPDGPVPFHYPGVPLAEDFGVGG 272 >NMB1966 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Nme Neisseria meningitidis MC58 Length = 266 Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 151/258 (58%), Positives = 201/258 (77%), Gaps = 1/258 (0%) Query: 5 VEIRDLHFRYGDRPILTGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLQPQQGRVEVD 64 +E++D+ F YGDRPIL ++ P+G AVMGGSGSGKTT++RLI GQ++PQ G+V ++ Sbjct: 7 IEMKDVAFAYGDRPILKNINFSIPQGNFAAVMGGSGSGKTTLMRLITGQIRPQSGQVLIE 66 Query: 65 GENVPSLATKQLYLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDDTLIRDLVLMK 124 G ++ + +LY RR+MG+LFQ+GALFTD++VFDN+AFP+RE T L + +IRDLVL+K Sbjct: 67 GRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFDNIAFPMRELTRLPEAVIRDLVLLK 126 Query: 125 LNAVGLRNAAALKPAEISGGMARRVALARAIALDPALIMYDEPFAGLDPISMGVTANLIR 184 LNAVGLR L P+E+SGGM+RRVALAR IALDP +++YDEPF GLDPIS+GV A+LI Sbjct: 127 LNAVGLRGVENLMPSELSGGMSRRVALARTIALDPEIMLYDEPFTGLDPISLGVIAHLIS 186 Query: 185 RLNDALGSTSILVSHDVNESFAIADYVYFLSAGKIVAQGTPQEMRESTDPYVKQFVHAQA 244 R+N AL STSI+V+HD+ +S I D V FL+ G+I+ G+PQEMRE P+V+QFV A Sbjct: 187 RVNKALRSTSIMVTHDIEKSLEIVDQVIFLAHGEIMFSGSPQEMRELDSPWVRQFVGGLA 246 Query: 245 DGPVPFHYPGK-SLAEDL 261 DGPV + YP + SL +DL Sbjct: 247 DGPVAYRYPAQTSLQQDL 264 >NMA0485 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component NmA Neisseria meningitidis Z2491 Length = 286 Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 150/258 (58%), Positives = 201/258 (77%), Gaps = 1/258 (0%) Query: 5 VEIRDLHFRYGDRPILTGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLQPQQGRVEVD 64 +E++D+ F YGDRPIL ++ P+G AVMGGSGSGKTT++RLI GQ++PQ G+V ++ Sbjct: 27 IEMKDVAFAYGDRPILNDINFSIPQGNFAAVMGGSGSGKTTLMRLITGQIRPQSGKVLIE 86 Query: 65 GENVPSLATKQLYLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDDTLIRDLVLMK 124 G ++ + +LY RR+MG+LFQ+GALFTD++VFDN+AFP+RE T L + +IRDLVL+K Sbjct: 87 GRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFDNIAFPMRELTRLPEAVIRDLVLLK 146 Query: 125 LNAVGLRNAAALKPAEISGGMARRVALARAIALDPALIMYDEPFAGLDPISMGVTANLIR 184 LNAVGLR L P+E+SGGM+RRVALAR IALDP +++YDEPF GLDPIS+GV A+LI Sbjct: 147 LNAVGLRGVENLMPSELSGGMSRRVALARTIALDPEIMLYDEPFTGLDPISLGVIAHLIS 206 Query: 185 RLNDALGSTSILVSHDVNESFAIADYVYFLSAGKIVAQGTPQEMRESTDPYVKQFVHAQA 244 R+N AL STS++V+HD+ +S I D V FL+ G+I+ G+PQEMRE P+V+QFV A Sbjct: 207 RVNKALRSTSVMVTHDIEKSLEIVDQVIFLAHGEIMFSGSPQEMRELDSPWVRQFVGGLA 266 Query: 245 DGPVPFHYPGK-SLAEDL 261 DGPV + YP + SL +DL Sbjct: 267 DGPVAYRYPAQTSLQQDL 284 >VC2520 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Vch Vibrio cholerae Length = 267 Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 157/259 (60%), Positives = 203/259 (78%) Query: 3 NIVEIRDLHFRYGDRPILTGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLQPQQGRVE 62 ++V I++L F R I + + P+GKV A+MG SG GKTT+LRLIGGQL P+QG + Sbjct: 5 DLVTIKNLRFSRSQRVIFDDIDLHVPKGKVTAIMGPSGIGKTTLLRLIGGQLLPEQGEIW 64 Query: 63 VDGENVPSLATKQLYLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDDTLIRDLVL 122 DGEN+P+L+ ++LY R+KM MLFQ+GALFTD+ VFDNVA+PLREHT+LD+ +I+ LVL Sbjct: 65 FDGENIPTLSRRKLYRARKKMSMLFQSGALFTDLNVFDNVAYPLREHTELDEAMIKTLVL 124 Query: 123 MKLNAVGLRNAAALKPAEISGGMARRVALARAIALDPALIMYDEPFAGLDPISMGVTANL 182 +KL AVGLR AA L P+E+SGGMARR ALARAIALDP LIMYDEPF G DPI+MGV L Sbjct: 125 LKLEAVGLRGAAYLMPSELSGGMARRAALARAIALDPELIMYDEPFVGQDPITMGVLVEL 184 Query: 183 IRRLNDALGSTSILVSHDVNESFAIADYVYFLSAGKIVAQGTPQEMRESTDPYVKQFVHA 242 IR LN ALG TS++VSHDV E +IAD+VY L+ GK++AQG+PQ +R++ DP V+QF+ Sbjct: 185 IRNLNRALGVTSVVVSHDVPEVMSIADWVYLLADGKVIAQGSPQALRDNPDPRVQQFLCG 244 Query: 243 QADGPVPFHYPGKSLAEDL 261 ADGPVPF +P + + ++L Sbjct: 245 DADGPVPFRFPAQPIEQEL 263 >PA4456 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Pae Pseudomonas aeruginosa Length = 269 Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 147/257 (57%), Positives = 191/257 (74%) Query: 5 VEIRDLHFRYGDRPILTGLHMDFPRGKVVAVMGGSGSGKTTILRLIGGQLQPQQGRVEVD 64 VE++ L F+ G R I + + PRGKV +MG SG GKTT+LRLI QL+P +G V V+ Sbjct: 9 VELKGLTFKRGSRAIFDNIDVRIPRGKVTGIMGPSGCGKTTLLRLIASQLRPSKGEVWVN 68 Query: 65 GENVPSLATKQLYLLRRKMGMLFQNGALFTDMTVFDNVAFPLREHTDLDDTLIRDLVLMK 124 G+N+P L+ L+ +R++ G+LFQ+GALFTD+ VF+NVAFPLR HT L + +IRD+VLMK Sbjct: 69 GQNLPQLSRGDLFDMRKQFGVLFQSGALFTDLDVFENVAFPLRVHTQLPEEMIRDIVLMK 128 Query: 125 LNAVGLRNAAALKPAEISGGMARRVALARAIALDPALIMYDEPFAGLDPISMGVTANLIR 184 L AVGLR A L P E+SGGM RRVALARAIALDP +++YDEPF G DPI+MGV LIR Sbjct: 129 LQAVGLRGAVELMPDELSGGMKRRVALARAIALDPQILLYDEPFVGQDPIAMGVLVRLIR 188 Query: 185 RLNDALGSTSILVSHDVNESFAIADYVYFLSAGKIVAQGTPQEMRESTDPYVKQFVHAQA 244 LNDALG TSI+VSHD+ E+ +IADY+Y + G+++ GTP ++E+ DP ++QFV Sbjct: 189 LLNDALGITSIVVSHDLAETASIADYIYIVGDGRVLGHGTPDVLKETDDPRIRQFVKGIP 248 Query: 245 DGPVPFHYPGKSLAEDL 261 DGPVPFHYP + DL Sbjct: 249 DGPVPFHYPARDYRADL 265