BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3951.p         (67 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2942 [U] COG1826 Sec-independent protein secretion pathway co...    84   5e-17
ZtatA [U] COG1826 Sec-independent protein secretion pathway comp...    63   2e-10
tatA [U] COG1826 Sec-independent protein secretion pathway compo...    63   2e-10
ECs4766 [U] COG1826 Sec-independent protein secretion pathway co...    63   2e-10
STM3973 [U] COG1826 Sec-independent protein secretion pathway co...    61   6e-10

>RSc2942 [U] COG1826 Sec-independent protein secretion pathway components
          Rso Ralstonia solanacearum
          Length = 85

 Score = 84.3 bits (207), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 19/85 (22%)

Query: 1  MGSFSIWHWLIVLVIVMLVFGTKKLGNMGSDLGKAVKGFKDGVKGADEEKK--------- 51
          MGSFSIWHWLIVL+I+M+VFGTKKL N+GSDLG AVKGFK+G++   E+K          
Sbjct: 1  MGSFSIWHWLIVLLIIMMVFGTKKLRNIGSDLGSAVKGFKEGMREGSEDKPAGSQQGQQA 60

Query: 52 ----------DVAIDVQAKEKDKSG 66
                       IDV+A++K K G
Sbjct: 61 AGQPPRELHDSTTIDVEARDKSKQG 85


>ZtatA [U] COG1826 Sec-independent protein secretion pathway components
          EcZ Escherichia coli O157:H7 EDL933
          Length = 103

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 40/52 (76%), Gaps = 1/52 (1%)

Query: 1  MGSFSIWHWLIVLVIVMLVFGTKKLGNMGSDLGKAVKGFKDGVKGADEEKKD 52
          MG  SIW  LI+ VIV+L+FGTKKLG++GSDLG ++KGFK  +   DE K+D
Sbjct: 15 MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSD-DEPKQD 65


>tatA [U] COG1826 Sec-independent protein secretion pathway components
          Eco Escherichia coli K12
          Length = 103

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 40/52 (76%), Gaps = 1/52 (1%)

Query: 1  MGSFSIWHWLIVLVIVMLVFGTKKLGNMGSDLGKAVKGFKDGVKGADEEKKD 52
          MG  SIW  LI+ VIV+L+FGTKKLG++GSDLG ++KGFK  +   DE K+D
Sbjct: 15 MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSD-DEPKQD 65


>ECs4766 [U] COG1826 Sec-independent protein secretion pathway components
          Ecs Escherichia coli O157:H7
          Length = 89

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 40/52 (76%), Gaps = 1/52 (1%)

Query: 1  MGSFSIWHWLIVLVIVMLVFGTKKLGNMGSDLGKAVKGFKDGVKGADEEKKD 52
          MG  SIW  LI+ VIV+L+FGTKKLG++GSDLG ++KGFK  +   DE K+D
Sbjct: 1  MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSD-DEPKQD 51


>STM3973 [U] COG1826 Sec-independent protein secretion pathway components
          Sty Salmonella typhimurium LT2
          Length = 84

 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 40/57 (70%)

Query: 1  MGSFSIWHWLIVLVIVMLVFGTKKLGNMGSDLGKAVKGFKDGVKGADEEKKDVAIDV 57
          MG  SIW  LIV VIV+L+FGTKKLG++GSDLG ++KGFK  +   D ++   + D 
Sbjct: 1  MGGISIWQLLIVAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDDAKQDKTSQDA 57