BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3927.p         (209 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0741 [S] COG3521 Uncharacterized protein conserved in bacteri...   185   5e-47
PA1666 [S] COG3521 Uncharacterized protein conserved in bacteria...    60   3e-09
PA0080 [S] COG3521 Uncharacterized protein conserved in bacteria...    55   9e-08
STM0280 [S] COG3521 Uncharacterized protein conserved in bacteri...    54   3e-07
YPO1487 [S] COG3521 Uncharacterized protein conserved in bacteri...    51   2e-06

>RSp0741 [S] COG3521 Uncharacterized protein conserved in bacteria Rso
           Ralstonia solanacearum
          Length = 193

 Score =  185 bits (470), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 95/199 (47%), Positives = 134/199 (67%), Gaps = 7/199 (3%)

Query: 11  MAVVISSISGCAAVGAATSVAQAAKSTLEALGLKKPDTPEVPDAMKQPRTVAIKLHASKA 70
           MAV+  +++ C+    A+ +A AA   LEA+GLK  +   VPDA K PR V +KL A   
Sbjct: 1   MAVI--ALTACST--GASVLAGAASGALEAVGLKASN---VPDAQKPPREVPLKLTAGAN 53

Query: 71  LNLDSQQRPLALVVKIYKLKQNISFQQASYDTFLSAQKEKEALGADLLEVKEVTLVPGQR 130
           LN  + +RP+ALVV++Y LK   SF QA YDTF+   +EK+ LGADL++V+E+TL+PGQR
Sbjct: 54  LNAATDRRPVALVVRLYALKDPTSFLQAPYDTFIDPAREKQTLGADLVQVREMTLIPGQR 113

Query: 131 YEISEKVSYEAGYIGVVALFVNPAPQRWRVAFKADESEKNGITVGLQSCSLTVGAGALAI 190
           YE SEKVS EA  +GVVALF +PA QRW+ AF A+++EK+GI +GL +C++T+  G+   
Sbjct: 114 YEFSEKVSREASTLGVVALFRSPAAQRWKFAFNAEKNEKSGIMIGLHACAMTLTTGSPTT 173

Query: 191 DSQGKPQEKNLMLAPVQCN 209
            +   P     +L+P  C 
Sbjct: 174 PAGSAPLSDLNLLSPASCG 192


>PA1666 [S] COG3521 Uncharacterized protein conserved in bacteria Pae
           Pseudomonas aeruginosa
          Length = 168

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 2/97 (2%)

Query: 63  IKLHASKALNLDSQQRPLALVVKIYKLKQNISFQQASYDTFLSAQKEKEALGADLLEVKE 122
           + L A + +N D   RP  +VV++++LK  ++F+ A  D F   ++ KE L  DL+  +E
Sbjct: 38  LALSAGERVNPDLNGRPSPVVVRLFELKHPVAFENA--DFFSLYERPKETLDPDLVTSEE 95

Query: 123 VTLVPGQRYEISEKVSYEAGYIGVVALFVNPAPQRWR 159
           + L PG+R E+   V   + Y+GV+A + +     WR
Sbjct: 96  LELRPGERVELKLSVEEGSRYVGVLAAYRDLGEASWR 132


>PA0080 [S] COG3521 Uncharacterized protein conserved in bacteria Pae
           Pseudomonas aeruginosa
          Length = 154

 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 9/135 (6%)

Query: 49  PEVPDAMKQPRTVAIKLHASKALNLDSQQRPLALVVKIYKLKQNISFQQASYDTFLSAQK 108
           PE P     P  V I LHA+  LN  +  +   L +++Y+LK++ +F +A Y  F     
Sbjct: 21  PETP-----PTRVVIWLHAAPNLNPSAAGQAAPLRLRLYELKKDTAFGRADY--FALTDN 73

Query: 109 EKEALGADLLEVKEVTLVPGQRYEISEKVSYEAGYIGVVALFVNPAPQRWR--VAFKADE 166
            +  LG DL+E  E  L PG+   I   +  +   +G VA + +     WR  +      
Sbjct: 74  AQSTLGGDLVEQDEFLLRPGEERRIERTLDEQTRQLGFVAAYRDLDRATWRQVLDVPGQR 133

Query: 167 SEKNGITVGLQSCSL 181
           +    IT+G Q+  +
Sbjct: 134 TSHLDITLGAQAIGI 148


>STM0280 [S] COG3521 Uncharacterized protein conserved in bacteria Sty
           Salmonella typhimurium LT2
          Length = 178

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 4/117 (3%)

Query: 51  VPDAMKQPRTVAIKLHASKALNLDSQQRPLALVVKIYKLKQNISFQQASYDTFLSAQKEK 110
           +PD   Q   +++K  AS  +N D+Q++   + +++Y+LK + +F  A Y +      +K
Sbjct: 32  LPDLESQRLDLSVK--ASDKVNPDNQKKAAPIEIRVYELKNDAAFTTADYWSL--HDNDK 87

Query: 111 EALGADLLEVKEVTLVPGQRYEISEKVSYEAGYIGVVALFVNPAPQRWRVAFKADES 167
             L  DL+      L PG+  ++   ++ +   IGV+A + N A   WRV +K  E+
Sbjct: 88  SVLTDDLVRRDSFILRPGEEKKLRRPLNAQTTAIGVLAGYRNLAKSVWRVTYKIPEA 144


>YPO1487 [S] COG3521 Uncharacterized protein conserved in bacteria Ype
           Yersinia pestis
          Length = 162

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 25/173 (14%)

Query: 18  ISGCAAVGAAT-SVAQAAKSTLEALGLKKPDTPEVPDAMKQPRTVAIKLHASKALNLDSQ 76
           +SGC    A T S   A KS                   KQ + + +   A +ALN D+ 
Sbjct: 3   LSGCGLTQAVTDSTVSATKSLF----------------YKQIKVLHLDFTAREALNTDAH 46

Query: 77  QRPLA---LVVKIYKLKQNISFQQASYDTFLSAQKEKEALGADLLEVKEVTLVPGQRYEI 133
           +   +   ++V++Y+L+ + +F +  Y     A   + AL  DLL  + V + PG    +
Sbjct: 47  EANSSSEPVMVRVYQLRDDKTFLKTVYQQL--ASDGEAALKDDLLASRSVVVKPGGAVTL 104

Query: 134 SEKVSYEAGYIGVVALFVNP--APQRWRVAFKADESEKNG-ITVGLQSCSLTV 183
              +  E  ++ VVALF +P  A   WR+    D+   +   T+ L + SLT+
Sbjct: 105 DMPMEKETQFVAVVALFRHPDMAKDHWRLILTLDDLHPDKPRTLELGNNSLTL 157