BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3911.p         (284 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

MA0472 [L] COG3666 Transposase and inactivated derivatives Mac M...    39   0.015
MA4227 [L] COG3666 Transposase and inactivated derivatives Mac M...    39   0.015
MA3313 [L] COG3666 Transposase and inactivated derivatives Mac M...    39   0.015
MA2566 [L] COG3666 Transposase and inactivated derivatives Mac M...    38   0.021
MA0944 [L] COG3666 Transposase and inactivated derivatives Mac M...    38   0.023

>MA0472 [L] COG3666 Transposase and inactivated derivatives Mac
           Methanosarcina acetivorans str.C2A
          Length = 494

 Score = 38.9 bits (89), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 11/174 (6%)

Query: 13  RILNSISD-----GKNATRSTTGSKAGKPRRLLVIVLVLLLVAGLATLAALRMNRPDSAP 67
           R+LN I D        +T S  G  A  PR LL I+L   L+   ++    +M + D+A 
Sbjct: 28  RVLNDIVDVVDITAIESTYSKEGCPAYHPRPLLKILLYGYLIGIRSSRKLQQMTQTDTAF 87

Query: 68  VQATGANAP-VPPVASVTSASTPAAEAITTPAAPAAQESSGVGDTAVINDTASHATDDAA 126
           +       P    +    S      + I +      +E   +G +  I+ T   A  +A+
Sbjct: 88  MYLAAMQKPDFHTICRFRSTHLGPIKEIFSQVVTFCKEMDMIGSSISIDGTKVKA--NAS 145

Query: 127 STASRGPDQLTSALEEGVKPPPATLKNALEAKPEKPAKQAAPHE--DKKKKAAK 178
           S  S+  D L   +++ +K    T K+  E   +    Q  P E  DKKK+  K
Sbjct: 146 SRQSKSSDALEKEIDKILKESIETDKHEDEIYGDSTPYQ-IPEELVDKKKRLEK 198


>MA4227 [L] COG3666 Transposase and inactivated derivatives Mac
           Methanosarcina acetivorans str.C2A
          Length = 497

 Score = 38.9 bits (89), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 71/175 (40%), Gaps = 11/175 (6%)

Query: 13  RILNSISD-----GKNATRSTTGSKAGKPRRLLVIVLVLLLVAGLATLAALRMNRPDSAP 67
           R+LN I D        +T S  G  A  PR LL I+L   L+   ++    +M + D+A 
Sbjct: 31  RVLNDIVDVVDITAIESTYSKEGCPAYHPRPLLKILLYGYLIGIRSSRKLQQMTQTDTAF 90

Query: 68  VQATGANAP-VPPVASVTSASTPAAEAITTPAAPAAQESSGVGDTAVINDTASHATDDAA 126
           +       P    +    S      + I +      +E   +G +  I+ T   A  +A+
Sbjct: 91  MYLAAMQKPDFHTICRFRSTHLGPIKEIFSQVVTFCKEMDMIGSSISIDGTKVKA--NAS 148

Query: 127 STASRGPDQLTSALEEGVKPPPATLKNALEAKPEKPAKQAAPHE--DKKKKAAKT 179
           S  S+  D L   +++ +K    T K+  E   +    Q  P E  DKKK+  K 
Sbjct: 149 SRQSKSSDALEKEIDKILKESIETDKHEDEIYGDSTPYQ-IPEELVDKKKRLEKI 202


>MA3313 [L] COG3666 Transposase and inactivated derivatives Mac
           Methanosarcina acetivorans str.C2A
          Length = 569

 Score = 38.5 bits (88), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 11/174 (6%)

Query: 13  RILNSISD-----GKNATRSTTGSKAGKPRRLLVIVLVLLLVAGLATLAALRMNRPDSAP 67
           R+LN I D        +T S  G  A  PR LL I+L   L+   ++    +M + D+A 
Sbjct: 47  RVLNDIVDVVDITAIESTYSKEGCPAYHPRPLLKILLYDYLIGIRSSRKLQQMTQTDTAF 106

Query: 68  VQATGANAP-VPPVASVTSASTPAAEAITTPAAPAAQESSGVGDTAVINDTASHATDDAA 126
           +       P    +    S      + I +      +E   +G +  I+ T   A  +A+
Sbjct: 107 MYLAAMQKPDFHTICRFRSTHLGPIKEIFSQVVTFCKEMDMIGSSISIDGTKVKA--NAS 164

Query: 127 STASRGPDQLTSALEEGVKPPPATLKNALEAKPEKPAKQAAPHE--DKKKKAAK 178
           S  S+  D L   +++ +K    T K+  E   +    Q  P E  DKKK+  K
Sbjct: 165 SRQSKSSDALEKEIDKILKESIETDKHEDEIYGDSTPYQ-IPEELVDKKKRLEK 217


>MA2566 [L] COG3666 Transposase and inactivated derivatives Mac
           Methanosarcina acetivorans str.C2A
          Length = 395

 Score = 38.1 bits (87), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 71/175 (40%), Gaps = 11/175 (6%)

Query: 13  RILNSISD-----GKNATRSTTGSKAGKPRRLLVIVLVLLLVAGLATLAALRMNRPDSAP 67
           R+LN I D        +T S  G  A  PR LL I+L   L+   ++    +M + D+A 
Sbjct: 31  RVLNDIVDVVDITAIESTYSKEGCPAYHPRPLLKILLYGYLIGIRSSRKLQQMTQTDTAF 90

Query: 68  VQATGANAP-VPPVASVTSASTPAAEAITTPAAPAAQESSGVGDTAVINDTASHATDDAA 126
           +       P    +    S      + I +      +E   +G +  I+ T   A  +A+
Sbjct: 91  MYLAAMQKPDFHTICRFRSTHLGPIKEIFSQVVTFCKEMDMIGSSISIDGTKVKA--NAS 148

Query: 127 STASRGPDQLTSALEEGVKPPPATLKNALEAKPEKPAKQAAPHE--DKKKKAAKT 179
           S  S+  D L   +++ +K    T K+  E   +    Q  P E  DKKK+  K 
Sbjct: 149 SRQSKSSDALEKEIDKILKESIETDKHEAEIYGDSTPSQ-IPEELVDKKKRLEKI 202


>MA0944 [L] COG3666 Transposase and inactivated derivatives Mac
           Methanosarcina acetivorans str.C2A
          Length = 513

 Score = 38.1 bits (87), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 71/175 (40%), Gaps = 11/175 (6%)

Query: 13  RILNSISD-----GKNATRSTTGSKAGKPRRLLVIVLVLLLVAGLATLAALRMNRPDSAP 67
           R+LN I D        +T S  G  A  PR LL I+L   L+   ++    +M + D+A 
Sbjct: 47  RVLNDIVDVVDITAIESTYSKEGCPAYHPRPLLKILLYGYLIGIRSSRKLQQMTQTDTAF 106

Query: 68  VQATGANAP-VPPVASVTSASTPAAEAITTPAAPAAQESSGVGDTAVINDTASHATDDAA 126
           +       P    +    S      + I +      +E   +G +  I+ T   A  +A+
Sbjct: 107 MYLAAMQKPDFHTICRFRSTHLGPIKEIFSQVVTFCKEMDMIGSSISIDGTKVKA--NAS 164

Query: 127 STASRGPDQLTSALEEGVKPPPATLKNALEAKPEKPAKQAAPHE--DKKKKAAKT 179
           S  S+  D L   +++ +K    T K+  E   +    Q  P E  DKKK+  K 
Sbjct: 165 SRQSKSSDALEKEIDKILKESIETDKHEDEIYGDSTPYQ-IPEELVDKKKRLEKI 218