BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3798.p (485 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll1728 [GEPR] COG0477 Permeases of the major facilitator superf... 393 e-109 mll8348 [GEPR] COG0477 Permeases of the major facilitator superf... 349 7e-96 BMEII0596 [GEPR] COG0477 Permeases of the major facilitator supe... 340 3e-93 SMc00813 [GEPR] COG0477 Permeases of the major facilitator super... 340 6e-93 AGc1103 [GEPR] COG0477 Permeases of the major facilitator superf... 336 6e-92 >mll1728 [GEPR] COG0477 Permeases of the major facilitator superfamily Mlo Mesorhizobium loti Length = 477 Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust. Identities = 213/464 (45%), Positives = 308/464 (66%), Gaps = 10/464 (2%) Query: 14 RMLPYIVAATFFMEYLDTTIIATALPEMAKTFGVGPNELSLGMTAYMLTLAVFIPISGWV 73 R + IVA FFM+ LD+TII+T+LP+M +++GV +S+G+T YMLT+AVF+P+SGW+ Sbjct: 18 RRVALIVAIAFFMQLLDSTIISTSLPQMGQSYGVPAVAMSVGITVYMLTMAVFVPLSGWL 77 Query: 74 ADRFGSRTVFGLAIAIFTFASILCGLSQNVWEFTAARVLQGLGGAMMVPVGRMIVVRSTS 133 ADRFG+R +F +AIA+FT AS+ CG SQN+ +F AAR +QGLG A+M PVGR++V+R+ S Sbjct: 78 ADRFGARNIFLVAIALFTLASLACGFSQNLTQFVAARAVQGLGSALMTPVGRILVLRNAS 137 Query: 134 KERLMKAIATITWPAIAAPVVGPSIGGFITTYASWHWIFLMNVPFGIAAFGAVMLVVRNE 193 K L+ A A ITWPA+ APVVGP +GGFITT SWHW F +N+P G+ V + + Sbjct: 138 KSELLNATALITWPALFAPVVGPVLGGFITTTLSWHWNFFINIPLGLIGLALVARFIPGD 197 Query: 194 HGQGKRPLDVIGFLLSGSALTSLLYGTEIASHMESNVKVALGFVVLGIVLGWCAWWHMRR 253 +PLD GF L+ L LLYG E +H E + + + GIV+GW A H+RR Sbjct: 198 RVANPKPLDWPGFFLTSLGLACLLYGLERIAHPEDGMLPTVLLIAAGIVIGWLAVRHLRR 257 Query: 254 IEHPLLDFSNLRIPTYSV-TVFTGSLTRIGVDAVPYLMPLMFQIGFGLTAFQSGLLLLAT 312 HPLLD S+ ++ T+++ T+ G++ R+ ++A P+L+PL+FQ+GFGL+ +GL++LA Sbjct: 258 APHPLLDLSSFKVLTFAISTLAAGTIFRVAINATPFLLPLLFQLGFGLSPVDAGLMILAY 317 Query: 313 ALGNLGMKAFTTRILQRFGFRSVALNNAAIAGCLIIVCGLLRPGTPLPVILGVIFCYGLS 372 +GNLGMK TT L+RFGFRSV + N IA I+ CG++ P TP +++ ++ GLS Sbjct: 318 FVGNLGMKTVTTPTLRRFGFRSVMVVNGIIASASIMACGVISPQTPQALVVVLMLIAGLS 377 Query: 373 RSMQFSTLATLAYADISDARKSSASTLWSVAQQMTIGMGIAFGALALRIAAWLRGEVVGA 432 RSMQF+ L TLA+ADI AR+SSA+TL S+ QQ+ + G+A A L ++ R + Sbjct: 378 RSMQFTALNTLAFADIDAARRSSAATLSSMLQQVAMLFGVAVAAAILNLSQIARAQ---- 433 Query: 433 VDASGAHFTLGDFQWAFAMAGVVTLMSVLGYRGLAPDAGSNIGG 476 L DF+ AF + G + L++ L + L AG+ + G Sbjct: 434 -----PSLDLVDFRIAFFVIGAIGLVAALRFLVLPRAAGAEVSG 472 >mll8348 [GEPR] COG0477 Permeases of the major facilitator superfamily Mlo Mesorhizobium loti Length = 473 Score = 349 bits (896), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 195/473 (41%), Positives = 283/473 (59%), Gaps = 14/473 (2%) Query: 14 RMLPYIVAATFFMEYLDTTIIATALPEMAKTFGVGPNELSLGMTAYMLTLAVFIPISGWV 73 R +P I+A FME +D+T+IAT+LP +A P L L +TAY+++LA+FIPISGW+ Sbjct: 3 RTIPLILAVALFMENMDSTVIATSLPAIAIDIHTSPIALKLALTAYLVSLAIFIPISGWM 62 Query: 74 ADRFGSRTVFGLAIAIFTFASILCGLSQNVWEFTAARVLQGLGGAMMVPVGRMIVVRSTS 133 ADRFG++ +F AIA+F S+ C LS ++ F +R LQG+GGAMM PVGR+++VR+T Sbjct: 63 ADRFGAKNIFRAAIAVFIVGSVACALSGSLPAFVVSRFLQGIGGAMMTPVGRLVLVRATP 122 Query: 134 KERLMKAIATITWPAIAAPVVGPSIGGFITTYASWHWIFLMNVPFGIAAFGAVMLVVRNE 193 K L+ A++ +T PA+ P+VGP IGGFITTY +WHWIFL+NVP G+ + Sbjct: 123 KSDLVAAMSWLTVPALVGPLVGPPIGGFITTYFTWHWIFLINVPIGLVGIWLATRFLPET 182 Query: 194 HGQGKRPLDVIGFLLSGSALTSLLYGTEIASHMESNVKVALGFVVLGIVL--GWCAWWHM 251 PLD IGF+LSG A + +++G + S + A GF+ +G+ L G H Sbjct: 183 ESMETPPLDFIGFVLSGLAASGVVFGLSVVSL--PYLPPATGFITVGVGLLSGALYLMHA 240 Query: 252 RRIEHPLLDFSNLRIPTYSVTVFTGSLTRIGVDAVPYLMPLMFQIGFGLTAFQSGLLLLA 311 RR ++PLL R + +V GSL RIG+ AVP+L+PLMFQIGFGLT FQSG++ Sbjct: 241 RRAKNPLLALELFRNQVFRSSVLGGSLFRIGIGAVPFLLPLMFQIGFGLTPFQSGMITFV 300 Query: 312 TALGNLGMKAFTTRILQRFGFRSVALNNAAIAGCLIIVCGLLRPGTPLPVILGVIFCYGL 371 +A+G +GMK T I + GFR V + + +A I + GL P TP ++L ++ G Sbjct: 301 SAVGAIGMKFVTALIFRVAGFRRVLIIGSLVAAASIAIYGLFTPETPYVLMLAILLVGGF 360 Query: 372 SRSMQFSTLATLAYADISDARKSSASTLWSVAQQMTIGMGIAFGALALRIAAWLRGEVVG 431 RSM F+ + L+YA++S S A+ + +V QQ++I +G+A L ++ + Sbjct: 361 IRSMFFTGVNALSYAEVSAEDTSKATPITAVFQQLSIALGVALAGGILEVSTSIH----- 415 Query: 432 AVDASGAHFTLGDFQWAFAMAGVVTLMSVLGYRGLAPDAGSNIGGGMRAVQGK 484 G LGDF AF + V+ + L + LAPDAG+ + G R K Sbjct: 416 -----GGPLMLGDFHIAFFIVAAVSAAASLSFMRLAPDAGNAVSGHGRLTTPK 463 >BMEII0596 [GEPR] COG0477 Permeases of the major facilitator superfamily Bme Brucella melitensis Length = 469 Score = 340 bits (873), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 186/462 (40%), Positives = 275/462 (59%), Gaps = 12/462 (2%) Query: 14 RMLPYIVAATFFMEYLDTTIIATALPEMAKTFGVGPNELSLGMTAYMLTLAVFIPISGWV 73 R++P ++A FME +D+ +I+T+LP +A G P L L +TAY++ LAVFIP+SGW+ Sbjct: 3 RIIPLVLAIALFMEQMDSNVISTSLPAIAADIGTSPIALKLALTAYLVALAVFIPVSGWM 62 Query: 74 ADRFGSRTVFGLAIAIFTFASILCGLSQNVWEFTAARVLQGLGGAMMVPVGRMIVVRSTS 133 ADRFG++ VF AIA+F SI C S ++ F AR LQG+GGAMM PVGR++++RST Sbjct: 63 ADRFGAKNVFRAAIAVFVVGSIACAASNSLPAFVIARFLQGMGGAMMTPVGRLVLIRSTP 122 Query: 134 KERLMKAIATITWPAIAAPVVGPSIGGFITTYASWHWIFLMNVPFG-IAAFGAVMLVVRN 192 + L+ A+A +T PA+ P+VGP +GGFITT+ +WHWIFL+NVP G I + A + N Sbjct: 123 RNELVSAMAWLTIPAMVGPLVGPPVGGFITTFLTWHWIFLINVPIGMIGIWFATHFLPDN 182 Query: 193 EHGQGKRPLDVIGFLLSGSALTSLLYGTEIASHMESNVKVALGFVVLGIVLGWCAWWHMR 252 E KR LD GF LSG A++ +++G + S + + +G++ H R Sbjct: 183 EERIIKR-LDWPGFFLSGFAMSGVVFGLSVVSLPALPPVIGFATLAVGMLCTVLYVLHAR 241 Query: 253 RIEHPLLDFSNLRIPTYSVTVFTGSLTRIGVDAVPYLMPLMFQIGFGLTAFQSGLLLLAT 312 R PLL+ + VF GS+ R G+ A+P+L+PLMFQ+GFGLT FQSG++ + Sbjct: 242 RTPDPLLNLRLFDNQVFRSAVFGGSIFRFGIGAIPFLLPLMFQLGFGLTPFQSGMMTFVS 301 Query: 313 ALGNLGMKAFTTRILQRFGFRSVALNNAAIAGCLIIVCGLLRPGTPLPVILGVIFCYGLS 372 A+G + MK RI R FR + + I+ I V G P TP +I+G + G + Sbjct: 302 AIGAISMKFGAKRIFTRISFRRALMGGSLISAAFIAVNGTFTPATPYWIIIGFLLVGGFA 361 Query: 373 RSMQFSTLATLAYADISDARKSSASTLWSVAQQMTIGMGIAFGALALRIAAWLRGEVVGA 432 RS+ F+ + LA+A+I + + S A+ L +VAQQ++I +G+A L I+ LR Sbjct: 362 RSLFFTGVNALAFAEIPNEKTSQATPLTAVAQQVSIAIGVALAGGILEISTMLR------ 415 Query: 433 VDASGAHFTLGDFQWAFAMAGVVTLMSVLGYRGLAPDAGSNI 474 GA L DF F + V++++ + LAPDAG + Sbjct: 416 ----GAPLALVDFHIGFFVVACVSVLAFFWFARLAPDAGKEL 453 >SMc00813 [GEPR] COG0477 Permeases of the major facilitator superfamily Sme Sinorhizobium meliloti Length = 470 Score = 340 bits (871), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 178/469 (37%), Positives = 272/469 (57%), Gaps = 10/469 (2%) Query: 14 RMLPYIVAATFFMEYLDTTIIATALPEMAKTFGVGPNELSLGMTAYMLTLAVFIPISGWV 73 R++P I+A FME +D+T+I+T+LP +A+ GVGP L L +T+YM+ LA+FIP+SGW+ Sbjct: 3 RIVPLILAVALFMEQMDSTVISTSLPAIARDMGVGPITLKLALTSYMVALAIFIPLSGWM 62 Query: 74 ADRFGSRTVFGLAIAIFTFASILCGLSQNVWEFTAARVLQGLGGAMMVPVGRMIVVRSTS 133 ADRFG++ +F AI +F S+ C ++ +++ F AR LQG+GGAMM PV R+++VRS Sbjct: 63 ADRFGAKRIFRAAILVFIAGSVFCAVADSLFAFVVARFLQGMGGAMMTPVARLVLVRSAP 122 Query: 134 KERLMKAIATITWPAIAAPVVGPSIGGFITTYASWHWIFLMNVPFGIAAFGAVMLVVRNE 193 + L+ A+A +T PA+ P+ GP +GGFITTY SWHWIFL+NVP GI + + + Sbjct: 123 RSELVSAMALLTIPALVGPLAGPPLGGFITTYFSWHWIFLINVPVGIVGYFLSGIYLPEM 182 Query: 194 HGQGKRPLDVIGFLLSGSALTSLLYGTEIASHMESNVKVALGFVVLGIVLGWCAWWHMRR 253 + P+D+IGFLL G A +++G + S + + V G+ +H RR Sbjct: 183 ERRNPPPVDIIGFLLGGIAAAGVVFGLSVISLPALPPAIGIASVSAGVAASLLYIFHARR 242 Query: 254 IEHPLLDFSNLRIPTYSVTVFTGSLTRIGVDAVPYLMPLMFQIGFGLTAFQSGLLLLATA 313 P+LD R + G++ RI V AVP+LMPLM Q+GFGL+ FQSGL+ A Sbjct: 243 HPAPVLDLKLFRDGAFRAASIGGTIFRISVGAVPFLMPLMLQVGFGLSPFQSGLITFVGA 302 Query: 314 LGNLGMKAFTTRILQRFGFRSVALNNAAIAGCLIIVCGLLRPGTPLPVILGVIFCYGLSR 373 +G + K R+ GFR+ L A IA G P TP +++ V+ G +R Sbjct: 303 VGAITTKFLARRVFAFAGFRTTLLIAAVIAAVTTFANGFFTPATPYLLLISVLLIAGFAR 362 Query: 374 SMQFSTLATLAYADISDARKSSASTLWSVAQQMTIGMGIAFGALALRIAAWLRGEVVGAV 433 S F+ + L++ADI DA S A+++ +V QQ+++ +G+A L L Sbjct: 363 SFFFTGVNALSFADIDDADASKATSMSAVLQQISLALGVAVAGAILEFETAL-------- 414 Query: 434 DASGAHFTLGDFQWAFAMAGVVTLMSVLGYRGLAPDAGSNIGGGMRAVQ 482 SG L DF AF + + L++ + + +A +AG+++ G AV+ Sbjct: 415 --SGKPLELADFHVAFMIIAIANLLAAIPFIAMAKNAGASVSGHRLAVR 461 >AGc1103 [GEPR] COG0477 Permeases of the major facilitator superfamily Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 475 Score = 336 bits (862), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 178/463 (38%), Positives = 273/463 (58%), Gaps = 10/463 (2%) Query: 14 RMLPYIVAATFFMEYLDTTIIATALPEMAKTFGVGPNELSLGMTAYMLTLAVFIPISGWV 73 R++P I+A FME +D+T+IAT+LP +AK VGP L L +TAYM+ LA+FIPISGW+ Sbjct: 13 RIIPLILAVALFMEQMDSTVIATSLPAIAKDLHVGPITLKLALTAYMVALAIFIPISGWM 72 Query: 74 ADRFGSRTVFGLAIAIFTFASILCGLSQNVWEFTAARVLQGLGGAMMVPVGRMIVVRSTS 133 AD++G++ +F +AI +F SI C +S +V+EF +R LQG+GGAMM PVGR++++R+T Sbjct: 73 ADKYGAKKIFRIAIGVFVVGSICCAVSSSVFEFVLSRFLQGMGGAMMTPVGRLVLLRTTK 132 Query: 134 KERLMKAIATITWPAIAAPVVGPSIGGFITTYASWHWIFLMNVPFGIAAFGAVMLVVRNE 193 + L+ A+A +T P + P+ GP IGGFITTY SWHWIFL+NVP GI + + Sbjct: 133 RSELVSAMALLTIPGLVGPLTGPPIGGFITTYFSWHWIFLINVPIGIIGIWLSTIFLPEI 192 Query: 194 HGQGKRPLDVIGFLLSGSALTSLLYGTEIASHMESNVKVALGFVVLGIVLGWCAWWHMRR 253 P+D GF+LSG A + +++G + S + + V+G + G+ H R Sbjct: 193 ETTNPPPMDGKGFILSGIAASGVVFGVSVVSLPALPPAIGIASTVIGFICGFLYMRHAAR 252 Query: 254 IEHPLLDFSNLRIPTYSVTVFTGSLTRIGVDAVPYLMPLMFQIGFGLTAFQSGLLLLATA 313 P+LDF + T+ G++ RI A+P+LMPLM QIGFGL FQSG++ A A Sbjct: 253 HPAPILDFRIFQNATFRAASVGGTVFRISTGAIPFLMPLMLQIGFGLNPFQSGMITFAGA 312 Query: 314 LGNLGMKAFTTRILQRFGFRSVALNNAAIAGCLIIVCGLLRPGTPLPVILGVIFCYGLSR 373 +G + K R+ GFRS + + + P TP P+I+ + G +R Sbjct: 313 IGAITTKFMAKRVFAATGFRSTLIGAGIVGAFTTLANSFFTPETPYPLIMIFLVTAGFAR 372 Query: 374 SMQFSTLATLAYADISDARKSSASTLWSVAQQMTIGMGIAFGALALRIAAWLRGEVVGAV 433 S F+ L+Y+DI D++ S A+++ SV QQ+++ +G+AF A L +++ + Sbjct: 373 SFFFTGSNALSYSDIEDSQASQATSMASVLQQISLALGVAFAASILEVSSMM-------- 424 Query: 434 DASGAHFTLGDFQWAFAMAGVVTLMSVLGYRGLAPDAGSNIGG 476 SG H L DF AF + +V+L +++ + AG+ + G Sbjct: 425 --SGTHLQLADFHIAFTIVALVSLFAIVPIIRMDAQAGAAVSG 465