BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3756.p (242 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA1339 [E] COG1126 ABC-type polar amino acid transport system, A... 404 e-113 RSc0484 [E] COG1126 ABC-type polar amino acid transport system, ... 387 e-107 STM0662 [E] COG1126 ABC-type polar amino acid transport system, ... 382 e-106 gltL [E] COG1126 ABC-type polar amino acid transport system, ATP... 379 e-105 ZgltL [E] COG1126 ABC-type polar amino acid transport system, AT... 379 e-105 >PA1339 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Pae Pseudomonas aeruginosa Length = 244 Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/244 (79%), Positives = 211/244 (86%), Gaps = 2/244 (0%) Query: 1 MIELNNVSKWYGSFQVLTDCSTSVKKGDVVVVCGPSGSGKSTLIKTVNGLEPFQKGTITV 60 MI + NVSKWYG FQVLTDCST V KG+VVVVCGPSGSGKSTLIK VN LEPFQKG I V Sbjct: 1 MISIKNVSKWYGDFQVLTDCSTEVAKGEVVVVCGPSGSGKSTLIKCVNALEPFQKGDIVV 60 Query: 61 DGVSVGDPKTNLSKLRARIGMVFQNFELFPHLSIRENLTIGQIKVLGRSKEEATEKGLKY 120 DG S+ DPKTNL KLR+R+GMVFQ+FELFPHLSI ENLTI QIKVLGRSKEEAT+KGL Sbjct: 61 DGTSIADPKTNLPKLRSRVGMVFQHFELFPHLSITENLTIAQIKVLGRSKEEATKKGLAL 120 Query: 121 LDRVGLLAHKDKFPGQLSGGQQQRVAIARALSMDPIAMLFDEPTSALDPEMINEVLDVMV 180 L+RVGL H K PGQLSGGQQQRVAIARAL+MDP+ MLFDEPTSALDPEM+NEVLDVMV Sbjct: 121 LERVGLKEHAHKHPGQLSGGQQQRVAIARALAMDPVVMLFDEPTSALDPEMVNEVLDVMV 180 Query: 181 GLAQEGMTMMVVTHEMGFARKVANRVVFMDKGVVVEDCAKDEFFA--SPRSERARDFLAK 238 LA EGMTMM VTHEMGFARKVANRV+FMD+G +VEDC K+EFF S RSERA+ FLAK Sbjct: 181 QLAHEGMTMMCVTHEMGFARKVANRVIFMDRGQIVEDCEKEEFFGDVSARSERAQQFLAK 240 Query: 239 IITH 242 I+ H Sbjct: 241 ILPH 244 >RSc0484 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Rso Ralstonia solanacearum Length = 244 Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust. Identities = 195/244 (79%), Positives = 215/244 (88%), Gaps = 2/244 (0%) Query: 1 MIELNNVSKWYGSFQVLTDCSTSVKKGDVVVVCGPSGSGKSTLIKTVNGLEPFQKGTITV 60 MIE+ NVSKWYG FQVLTDC+TSVKK +VVVVCGPSGSGKSTLIKTVN LEPFQKG I V Sbjct: 1 MIEIKNVSKWYGQFQVLTDCTTSVKKSEVVVVCGPSGSGKSTLIKTVNALEPFQKGEILV 60 Query: 61 DGVSVGDPKTNLSKLRARIGMVFQNFELFPHLSIRENLTIGQIKVLGRSKEEATEKGLKY 120 DG SVG TNL KLR+R+GMVFQNFELFPHLSI ENLTI Q KVLGRSK+EA KGLKY Sbjct: 61 DGTSVGARGTNLPKLRSRVGMVFQNFELFPHLSITENLTIAQQKVLGRSKDEAMAKGLKY 120 Query: 121 LDRVGLLAHKDKFPGQLSGGQQQRVAIARALSMDPIAMLFDEPTSALDPEMINEVLDVMV 180 L+RVGL AH K+PGQLSGGQQQRVAIARALSMDPI MLFDEPTSALDPEM+NEVLDVMV Sbjct: 121 LERVGLKAHAAKYPGQLSGGQQQRVAIARALSMDPICMLFDEPTSALDPEMVNEVLDVMV 180 Query: 181 GLAQEGMTMMVVTHEMGFARKVANRVVFMDKGVVVEDCAKDEFFAS--PRSERARDFLAK 238 LA+EGMTMM VTHEMGFARKVANRV+FMD+G +VEDC K+EFF + RS+RA+ FL+K Sbjct: 181 ELAKEGMTMMCVTHEMGFARKVANRVIFMDQGRIVEDCEKEEFFGNIDNRSDRAKQFLSK 240 Query: 239 IITH 242 I++H Sbjct: 241 ILSH 244 >STM0662 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Sty Salmonella typhimurium LT2 Length = 241 Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust. Identities = 192/240 (80%), Positives = 213/240 (88%) Query: 1 MIELNNVSKWYGSFQVLTDCSTSVKKGDVVVVCGPSGSGKSTLIKTVNGLEPFQKGTITV 60 MI L NVSKWYG FQVLTDCST VKKG+VVVVCGPSGSGKSTLIKTVNGLEP QKG ITV Sbjct: 1 MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKTVNGLEPVQKGEITV 60 Query: 61 DGVSVGDPKTNLSKLRARIGMVFQNFELFPHLSIRENLTIGQIKVLGRSKEEATEKGLKY 120 +G+ V D KT+L+KLR+R+GMVFQ+FELFPHLSI ENLT+ Q+KVL R K A +KGLK Sbjct: 61 NGIIVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQVKVLKRDKAAARDKGLKL 120 Query: 121 LDRVGLLAHKDKFPGQLSGGQQQRVAIARALSMDPIAMLFDEPTSALDPEMINEVLDVMV 180 L+RVGL AH +KFP QLSGGQQQRVAIARAL MDPIAMLFDEPTSALDPEMINEVLDVMV Sbjct: 121 LERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLFDEPTSALDPEMINEVLDVMV 180 Query: 181 GLAQEGMTMMVVTHEMGFARKVANRVVFMDKGVVVEDCAKDEFFASPRSERARDFLAKII 240 LA EGMTMMVVTHEMGFARKVANRV+FMD+G +VED K+EFFA+P S+RA+DFLAKI+ Sbjct: 181 ELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDSPKEEFFANPSSDRAKDFLAKIL 240 >gltL [E] COG1126 ABC-type polar amino acid transport system, ATPase component Eco Escherichia coli K12 Length = 241 Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust. Identities = 191/240 (79%), Positives = 210/240 (87%) Query: 1 MIELNNVSKWYGSFQVLTDCSTSVKKGDVVVVCGPSGSGKSTLIKTVNGLEPFQKGTITV 60 MI L NVSKWYG FQVLTDCST VKKG+VVVVCGPSGSGKSTLIKTVNGLEP Q+G ITV Sbjct: 1 MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKTVNGLEPVQQGEITV 60 Query: 61 DGVSVGDPKTNLSKLRARIGMVFQNFELFPHLSIRENLTIGQIKVLGRSKEEATEKGLKY 120 DG+ V D KT+L+KLR+R+GMVFQ+FELFPHLSI ENLT+ Q+KVL R K A EK LK Sbjct: 61 DGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQVKVLKRDKAPAREKALKL 120 Query: 121 LDRVGLLAHKDKFPGQLSGGQQQRVAIARALSMDPIAMLFDEPTSALDPEMINEVLDVMV 180 L+RVGL AH +KFP QLSGGQQQRVAIARAL MDPIAMLFDEPTSALDPEMINEVLDVMV Sbjct: 121 LERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLFDEPTSALDPEMINEVLDVMV 180 Query: 181 GLAQEGMTMMVVTHEMGFARKVANRVVFMDKGVVVEDCAKDEFFASPRSERARDFLAKII 240 LA EGMTMMVVTHEMGFARKVANRV+FMD+G +VED KD FF P+S+RA+DFLAKI+ Sbjct: 181 ELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDSPKDAFFDDPKSDRAKDFLAKIL 240 >ZgltL [E] COG1126 ABC-type polar amino acid transport system, ATPase component EcZ Escherichia coli O157:H7 EDL933 Length = 241 Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust. Identities = 191/240 (79%), Positives = 210/240 (87%) Query: 1 MIELNNVSKWYGSFQVLTDCSTSVKKGDVVVVCGPSGSGKSTLIKTVNGLEPFQKGTITV 60 MI L NVSKWYG FQVLTDCST VKKG+VVVVCGPSGSGKSTLIKTVNGLEP Q+G ITV Sbjct: 1 MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKTVNGLEPVQQGEITV 60 Query: 61 DGVSVGDPKTNLSKLRARIGMVFQNFELFPHLSIRENLTIGQIKVLGRSKEEATEKGLKY 120 DG+ V D KT+L+KLR+R+GMVFQ+FELFPHLSI ENLT+ Q+KVL R K A EK LK Sbjct: 61 DGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQVKVLKRDKAPAREKALKL 120 Query: 121 LDRVGLLAHKDKFPGQLSGGQQQRVAIARALSMDPIAMLFDEPTSALDPEMINEVLDVMV 180 L+RVGL AH +KFP QLSGGQQQRVAIARAL MDPIAMLFDEPTSALDPEMINEVLDVMV Sbjct: 121 LERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLFDEPTSALDPEMINEVLDVMV 180 Query: 181 GLAQEGMTMMVVTHEMGFARKVANRVVFMDKGVVVEDCAKDEFFASPRSERARDFLAKII 240 LA EGMTMMVVTHEMGFARKVANRV+FMD+G +VED KD FF P+S+RA+DFLAKI+ Sbjct: 181 ELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDSPKDAFFDDPKSDRAKDFLAKIL 240