BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3744.p         (62 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0667 [C] COG1773 Rubredoxin Rso Ralstonia solanacearum             109   2e-24
CC2495 [C] COG1773 Rubredoxin Ccr Caulobacter vibrioides               77   8e-15
PA5350 [C] COG1773 Rubredoxin Pae Pseudomonas aeruginosa               76   1e-14
Rv3250c [C] COG1773 Rubredoxin Mtu Mycobacterium tuberculosis H37Rv    75   5e-14
MT3348 [C] COG1773 Rubredoxin MtC Mycobacterium tuberculosis CDC...    75   5e-14

>RSc0667 [C] COG1773 Rubredoxin Rso Ralstonia solanacearum
          Length = 60

 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 53/59 (89%)

Query: 4  SSQTEFKTWMCLICGWIYDEEAGLPDEGIAPGTRWDDVPINWTCPECGARKEDFEMVAI 62
            Q E+KTWMCLICGWIYDEE G PD+GIAPGT+W+DVPINWTCPECGARKEDFEMV I
Sbjct: 2  EQQIEYKTWMCLICGWIYDEEQGAPDDGIAPGTKWEDVPINWTCPECGARKEDFEMVQI 60


>CC2495 [C] COG1773 Rubredoxin Ccr Caulobacter vibrioides
          Length = 59

 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 33/58 (56%), Positives = 39/58 (67%)

Query: 5  SQTEFKTWMCLICGWIYDEEAGLPDEGIAPGTRWDDVPINWTCPECGARKEDFEMVAI 62
          S   FK W C  CG+IYDEE G P EG+APGTRW D+P  W CP CG  K DF+M+ +
Sbjct: 2  SAEPFKVWQCRTCGYIYDEEQGDPGEGLAPGTRWADIPAGWVCPLCGTPKSDFDMIEL 59


>PA5350 [C] COG1773 Rubredoxin Pae Pseudomonas aeruginosa
          Length = 55

 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 41/54 (75%)

Query: 9  FKTWMCLICGWIYDEEAGLPDEGIAPGTRWDDVPINWTCPECGARKEDFEMVAI 62
           + W C++CG+IYDE  GLP+EGI  GTRW+D+P +W CP+CG  K DFEM+ I
Sbjct: 1  MRKWQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADWVCPDCGVGKIDFEMIEI 54


>Rv3250c [C] COG1773 Rubredoxin Mtu Mycobacterium tuberculosis H37Rv
          Length = 60

 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 43/56 (76%)

Query: 7  TEFKTWMCLICGWIYDEEAGLPDEGIAPGTRWDDVPINWTCPECGARKEDFEMVAI 62
           ++K + C+ CG+ YDE  G P++GIA GTRWDD+P +W+CP+CGA K DFEMV +
Sbjct: 2  NDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAKSDFEMVEV 57


>MT3348 [C] COG1773 Rubredoxin MtC Mycobacterium tuberculosis CDC1551
          Length = 60

 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 43/56 (76%)

Query: 7  TEFKTWMCLICGWIYDEEAGLPDEGIAPGTRWDDVPINWTCPECGARKEDFEMVAI 62
           ++K + C+ CG+ YDE  G P++GIA GTRWDD+P +W+CP+CGA K DFEMV +
Sbjct: 2  NDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAKSDFEMVEV 57