BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3602.p (357 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0904_2 [E] COG0077 Prephenate dehydratase Rso Ralstonia solan... 383 e-106 NMB0446_2 [E] COG0077 Prephenate dehydratase Nme Neisseria menin... 285 9e-77 NMA2039_2 [E] COG0077 Prephenate dehydratase NmA Neisseria menin... 285 1e-76 XF2325_2 [E] COG0077 Prephenate dehydratase Xfa Xylella fastidio... 275 1e-73 PA3166_2 [E] COG0077 Prephenate dehydratase Pae Pseudomonas aeru... 273 4e-73 >RSc0904_2 [E] COG0077 Prephenate dehydratase Rso Ralstonia solanacearum Length = 271 Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust. Identities = 177/264 (67%), Positives = 216/264 (81%) Query: 91 VAYLGPEGTFSEQAVYQQFGHAISGLPCVSIDEVFRDAEAGTADFGVVPIENSSEGVINR 150 + YLGP GTF+EQAV+ FGH I +PC SIDEVFR AEAGT D GVVP+ENS+EGV++R Sbjct: 5 IGYLGPVGTFTEQAVFAHFGHEIQPMPCPSIDEVFRAAEAGTVDCGVVPVENSTEGVVSR 64 Query: 151 TLDLLLQTTLTISGEVAIPVHHSLMTASGKMEGITRICAHSQALAQCNAWLNMNYPAIER 210 TLDL LQT+L ISGE+A+ VHH+L+ +G M + + AH+QALAQC WLN NYP + R Sbjct: 65 TLDLFLQTSLKISGEIALRVHHNLLHKTGDMSQVKVVRAHAQALAQCQRWLNTNYPNLAR 124 Query: 211 QAVASNAEAARMAGEDNSVAAIAGEIAGQKYSLQTVNAHIQDDPHNRTRFAVIGRLRTAP 270 +AV+SNAEAARMAGED +VAA+A A +Y L V A+++DDPHNRTRF VIG T P Sbjct: 125 EAVSSNAEAARMAGEDETVAALASVQAANRYGLHVVRANVEDDPHNRTRFVVIGNYETEP 184 Query: 271 SGRDQTSIVLSVPNKAGAVYNLLAPLARHGVSMTRFESRPARMGAWEYYFYVDLEGHEQD 330 SGRDQTS++LSVPN+AGAVY LLAPLA +GVSM RFESRPAR GAWEYYFYVD+EGH++D Sbjct: 185 SGRDQTSLILSVPNEAGAVYRLLAPLAENGVSMCRFESRPARSGAWEYYFYVDVEGHQRD 244 Query: 331 EKVAKALEELRQNAAFFKLLGSYP 354 +VA+ALE+LR +AA+FK+LGSYP Sbjct: 245 PQVARALEKLRHDAAYFKVLGSYP 268 >NMB0446_2 [E] COG0077 Prephenate dehydratase Nme Neisseria meningitidis MC58 Length = 273 Score = 285 bits (730), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 135/269 (50%), Positives = 187/269 (69%), Gaps = 3/269 (1%) Query: 89 VTVAYLGPEGTFSEQAVYQQFGHAISGLPCVSIDEVFRDAEAGTADFGVVPIENSSEGVI 148 +T+AYLGP+GTF++QA + FGHA + C +ID+ F+ E AD+ V P+ENS+EG + Sbjct: 1 LTIAYLGPQGTFTQQAAIKHFGHAAHTMACPTIDDCFKQVETRQADYLVAPVENSTEGSV 60 Query: 149 NRTLDLLLQTTLTISGEVAIPVHHSLM-TASGKMEGITRICAHSQALAQCNAWLNMNYPA 207 RTLDLL T L GE+ + +HH+L+ +G EGI ++ +H+QALAQCN WL + P Sbjct: 61 GRTLDLLAVTALQACGEIVLRIHHNLLRKNNGSTEGIAKVFSHAQALAQCNDWLGRHLPN 120 Query: 208 IERQAVASNAEAARMAGE--DNSVAAIAGEIAGQKYSLQTVNAHIQDDPHNRTRFAVIGR 265 ER AV+SNAEAAR+ E D +VAAIAG A + Y L V I+D+P+N TRF V+G Sbjct: 121 AERIAVSSNAEAARLVAESDDGTVAAIAGRTAAEIYGLDMVAECIEDEPNNTTRFLVMGH 180 Query: 266 LRTAPSGRDQTSIVLSVPNKAGAVYNLLAPLARHGVSMTRFESRPARMGAWEYYFYVDLE 325 T SG D+TS+ +S PN+AGAV +LL PL G+SMT+FESRP++ WEY F++D+E Sbjct: 181 HETGASGSDKTSLAVSAPNRAGAVASLLQPLTESGISMTKFESRPSKSVLWEYLFFIDIE 240 Query: 326 GHEQDEKVAKALEELRQNAAFFKLLGSYP 354 GH +D ++ ALE L + A+F K++GSYP Sbjct: 241 GHRRDAQIQTALERLGERASFVKVIGSYP 269 >NMA2039_2 [E] COG0077 Prephenate dehydratase NmA Neisseria meningitidis Z2491 Length = 273 Score = 285 bits (730), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 136/269 (50%), Positives = 186/269 (69%), Gaps = 3/269 (1%) Query: 89 VTVAYLGPEGTFSEQAVYQQFGHAISGLPCVSIDEVFRDAEAGTADFGVVPIENSSEGVI 148 +T+AYLGP+GTF++QA + FGHA + C +ID F+ E AD+ V P+ENS+EG + Sbjct: 1 LTIAYLGPQGTFTQQAAIKHFGHAAHTMACPTIDNCFKQVETRQADYLVAPVENSTEGSV 60 Query: 149 NRTLDLLLQTTLTISGEVAIPVHHSLM-TASGKMEGITRICAHSQALAQCNAWLNMNYPA 207 RTLDLL T L GEV + +HH+L+ +G EGI ++ +H+QALAQCN WL + P Sbjct: 61 GRTLDLLAVTALQACGEVVLRIHHNLLRKNNGSTEGIAKVFSHAQALAQCNDWLGRHLPN 120 Query: 208 IERQAVASNAEAARMAGE--DNSVAAIAGEIAGQKYSLQTVNAHIQDDPHNRTRFAVIGR 265 ER AV+SNAEAAR+ E D +VAAIAG A + Y L V I+D+P+N TRF V+G Sbjct: 121 AERIAVSSNAEAARLVAESDDGTVAAIAGRTAAEIYGLDMVAECIEDEPNNTTRFLVMGH 180 Query: 266 LRTAPSGRDQTSIVLSVPNKAGAVYNLLAPLARHGVSMTRFESRPARMGAWEYYFYVDLE 325 T SG D+TS+ +S PN+AGAV +LL PL G+SMT+FESRP++ WEY F++D+E Sbjct: 181 HETGASGSDKTSLAVSAPNRAGAVASLLQPLTESGISMTKFESRPSKSVLWEYLFFIDIE 240 Query: 326 GHEQDEKVAKALEELRQNAAFFKLLGSYP 354 GH +D ++ ALE L + A+F K++GSYP Sbjct: 241 GHRRDAQIQTALERLGERASFVKVIGSYP 269 >XF2325_2 [E] COG0077 Prephenate dehydratase Xfa Xylella fastidiosa 9a5c Length = 271 Score = 275 bits (703), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 135/270 (50%), Positives = 179/270 (66%), Gaps = 1/270 (0%) Query: 89 VTVAYLGPEGTFSEQAVYQQFGHAISGLPCVSIDEVFRDAEAGTADFGVVPIENSSEGVI 148 + + YLGPEGTFS+QAV + FGH + G P SI+EVF++ EAG DFGVVP+ENS G I Sbjct: 1 LKIGYLGPEGTFSQQAVLKHFGHYVLGEPMASIEEVFQEVEAGHTDFGVVPVENSGHGTI 60 Query: 149 NRTLDLLLQTTLTISGEVAIPVHHSLMTASGKMEGITRICAHSQALAQCNAWLNMNYPAI 208 TLDL L + L I GE+ + VH LM+ SG++E I RI AH Q+ AQ WL N P + Sbjct: 61 QVTLDLFLNSKLKICGEIELRVHQYLMSRSGRLEDIHRIYAHPQSFAQTACWLRANLPHV 120 Query: 209 ERQAVASNAEAARMAGEDNSVAAIAGEIAGQKYSLQTVNAH-IQDDPHNRTRFAVIGRLR 267 E+ V+SNAE AR A N A+I E A + Y+L V H I+D+ N TRF VIGR Sbjct: 121 EKIPVSSNAEGARRASNANDAASIGSESAARVYALSKVFIHSIEDEQDNTTRFLVIGRRI 180 Query: 268 TAPSGRDQTSIVLSVPNKAGAVYNLLAPLARHGVSMTRFESRPARMGAWEYYFYVDLEGH 327 APSG D+TSI++ + + GA++ +L ARHG++M R ESRP+ WEY F++DL GH Sbjct: 181 FAPSGCDRTSILVFIRDNPGALFEVLGSFARHGINMNRIESRPSHQVRWEYVFFIDLLGH 240 Query: 328 EQDEKVAKALEELRQNAAFFKLLGSYPLGL 357 +DE + +AL EL Q+A K+LG+YP+ L Sbjct: 241 VEDEPMKQALAELEQHAVKVKILGAYPIAL 270 >PA3166_2 [E] COG0077 Prephenate dehydratase Pae Pseudomonas aeruginosa Length = 272 Score = 273 bits (698), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 124/267 (46%), Positives = 181/267 (67%), Gaps = 1/267 (0%) Query: 89 VTVAYLGPEGTFSEQAVYQQFGHAISGLPCVSIDEVFRDAEAGTADFGVVPIENSSEGVI 148 + VAYLGPEGTF++ A + FG+A+ P +IDEVFR+ AG +FGVVP+ENS+EG + Sbjct: 2 LKVAYLGPEGTFTQAAALKHFGNAVISTPMAAIDEVFREVAAGAVNFGVVPVENSTEGAV 61 Query: 149 NRTLDLLLQTTLTISGEVAIPVHHSLMTA-SGKMEGITRICAHSQALAQCNAWLNMNYPA 207 N TLD L+ + I GEV + +HH L+ + K + ITRI +H+Q+LAQC WL+ +YP+ Sbjct: 62 NHTLDSFLEHDMVICGEVELRIHHHLLVGETTKTDNITRIYSHAQSLAQCRKWLDSHYPS 121 Query: 208 IERQAVASNAEAARMAGEDNSVAAIAGEIAGQKYSLQTVNAHIQDDPHNRTRFAVIGRLR 267 +ER AV+SNA+AA+ + + AAIAG++A Y L ++ I+D P N TRF +IG Sbjct: 122 VERVAVSSNADAAKRVKSEWNSAAIAGDMAASLYDLSKLHEKIEDRPDNSTRFLIIGNQE 181 Query: 268 TAPSGRDQTSIVLSVPNKAGAVYNLLAPLARHGVSMTRFESRPARMGAWEYYFYVDLEGH 327 P+G D+TSI++S+ NK GA++ LL P +G+ +TR E+RP+R G W Y F++D GH Sbjct: 182 VPPTGDDKTSIIVSMRNKPGALHELLVPFHNNGIDLTRIETRPSRSGKWTYVFFIDFVGH 241 Query: 328 EQDEKVAKALEELRQNAAFFKLLGSYP 354 ++ + LE++ Q A K+LGSYP Sbjct: 242 HKEPLIKDVLEKIGQEAVALKVLGSYP 268