BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3564.p         (73 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0789 [S] COG2501 Uncharacterized conserved protein Rso Ralsto...    85   3e-17
ybcJ [S] COG2501 Uncharacterized conserved protein Eco Escherich...    69   2e-12
ZybcJ [S] COG2501 Uncharacterized conserved protein EcZ Escheric...    69   2e-12
ECs0590 [S] COG2501 Uncharacterized conserved protein Ecs Escher...    69   2e-12
YPO2825 [S] COG2501 Uncharacterized conserved protein Ype Yersin...    67   7e-12

>RSc0789 [S] COG2501 Uncharacterized conserved protein Rso Ralstonia
          solanacearum
          Length = 73

 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/70 (62%), Positives = 52/70 (74%), Gaps = 1/70 (1%)

Query: 1  MQKITFPLQGHPYVELNQLLKLCGLCDSGGAGKQLVADGQVKVDGKPESRKTCKISAGQK 60
          M  I F L    Y+EL++LLKL G+ DSGGAGK +VADG V VDG+PE+RKT KI AGQ 
Sbjct: 1  MANIDFQLTS-DYIELHKLLKLTGVVDSGGAGKAVVADGGVTVDGQPETRKTAKIRAGQV 59

Query: 61 VSLGDVQITV 70
          V LGDV+I V
Sbjct: 60 VMLGDVRIAV 69


>ybcJ [S] COG2501 Uncharacterized conserved protein Eco Escherichia
          coli K12
          Length = 77

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 42/67 (62%)

Query: 5  TFPLQGHPYVELNQLLKLCGLCDSGGAGKQLVADGQVKVDGKPESRKTCKISAGQKVSLG 64
          TF L  HP+VEL  LLKL G  +SG   K  +A+GQVKVDG  E+RK CKI AGQ VS  
Sbjct: 10 TFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFA 69

Query: 65 DVQITVT 71
             + V 
Sbjct: 70 GHSVQVV 76


>ZybcJ [S] COG2501 Uncharacterized conserved protein EcZ Escherichia
          coli O157:H7 EDL933
          Length = 77

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 42/67 (62%)

Query: 5  TFPLQGHPYVELNQLLKLCGLCDSGGAGKQLVADGQVKVDGKPESRKTCKISAGQKVSLG 64
          TF L  HP+VEL  LLKL G  +SG   K  +A+GQVKVDG  E+RK CKI AGQ VS  
Sbjct: 10 TFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFA 69

Query: 65 DVQITVT 71
             + V 
Sbjct: 70 GHSVQVV 76


>ECs0590 [S] COG2501 Uncharacterized conserved protein Ecs Escherichia
          coli O157:H7
          Length = 77

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 42/67 (62%)

Query: 5  TFPLQGHPYVELNQLLKLCGLCDSGGAGKQLVADGQVKVDGKPESRKTCKISAGQKVSLG 64
          TF L  HP+VEL  LLKL G  +SG   K  +A+GQVKVDG  E+RK CKI AGQ VS  
Sbjct: 10 TFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFA 69

Query: 65 DVQITVT 71
             + V 
Sbjct: 70 GHSVQVV 76


>YPO2825 [S] COG2501 Uncharacterized conserved protein Ype Yersinia pestis
          Length = 70

 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 43/65 (66%)

Query: 6  FPLQGHPYVELNQLLKLCGLCDSGGAGKQLVADGQVKVDGKPESRKTCKISAGQKVSLGD 65
          F L+ HP+VEL  LLKL G  DSG + K  +ADG VKVDGK E+RK CKI A Q V    
Sbjct: 4  FHLEKHPHVELCDLLKLQGWNDSGASAKAAIADGLVKVDGKVETRKRCKILADQIVEFQG 63

Query: 66 VQITV 70
          +++ V
Sbjct: 64 MKVQV 68