BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3559.p (227 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0977 [C] COG2181 Nitrate reductase gamma subunit Rso Ralstoni... 308 6e-84 BMEII0953 Non COG 219 4e-57 PA3872 [C] COG2181 Nitrate reductase gamma subunit Pae Pseudomon... 204 9e-53 ZnarI [C] COG2181 Nitrate reductase gamma subunit EcZ Escherichi... 200 2e-51 ECs1732 [C] COG2181 Nitrate reductase gamma subunit Ecs Escheric... 200 2e-51 >RSp0977 [C] COG2181 Nitrate reductase gamma subunit Rso Ralstonia solanacearum Length = 227 Score = 308 bits (789), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 167/227 (73%), Positives = 193/227 (85%) Query: 1 MNYLHQFLYGIYPYIALVVFLLGSLVRFEREQYTWKSDSSQLLHAGRLRLGNLLFHVGVL 60 M + L+GIYPYIA +FLLGSL+RFEREQYTWKSDSSQLLH G LR+GNLLFHVG+L Sbjct: 1 MTMFNTLLFGIYPYIAGTIFLLGSLLRFEREQYTWKSDSSQLLHTGTLRVGNLLFHVGIL 60 Query: 61 GLFFGHLVGLLTPVAVWDAIGVTHSFKQAVAMLAGGVFGTLCLLGLLILIHRRWTDARIA 120 GLF GHL GLLTPVAVWDA+GV H KQ VAM AGGV G+LCL+GLL+LI+RR ++ RI Sbjct: 61 GLFGGHLAGLLTPVAVWDALGVPHGVKQLVAMTAGGVLGSLCLIGLLMLIYRRLSNPRIR 120 Query: 121 AVTRPSDKLLLLWLLVTLGLGLSTIAESAQHRDGHMMVLLMTWAQHIITLRGDAASFIEA 180 AVTR DKLLL WLL+TL LGL+TI SA H DG++MVLLMTWAQHI+TL+ DA+SF+ Sbjct: 121 AVTRRGDKLLLAWLLITLLLGLTTIFTSAGHLDGYVMVLLMTWAQHIVTLQADASSFVAD 180 Query: 181 APLLFKLHLFMGLTLFVIFPFTRLVHVWSGFASVTYLGRAWQLVRPR 227 PL+FKLHLFMG++LF+IFPFTRLVHVWSG ASVTY+GRAWQLVR R Sbjct: 181 VPLIFKLHLFMGMSLFLIFPFTRLVHVWSGLASVTYVGRAWQLVRGR 227 >BMEII0953 Non COG Length = 241 Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 117/227 (51%), Positives = 165/227 (72%), Gaps = 3/227 (1%) Query: 2 NYLHQFLYGIYPYIALVVFLLGSLVRFEREQYTWKSDSSQLLHAGRLRLGNLLFHVGVLG 61 +Y + FL+GIYPYIAL V LGS+VR++RE YTW+S SSQLL +L G++LFH+GVL Sbjct: 3 SYFNTFLFGIYPYIALSVLALGSIVRYDREPYTWRSGSSQLLRRRQLMWGSVLFHLGVLV 62 Query: 62 LFFGHLVGLLTPVAVWDAIGVTHSFKQAVAMLAGGVFGTLCLLGLLILIHRRWTDARIAA 121 +F GH VGLLTP+ ++D +G++H KQ +A++AGG+ G + ++G +L+HRR D R+ A Sbjct: 63 IFAGHFVGLLTPIWIFDTLGISHEAKQILAIVAGGIAGLMAIIGASMLVHRRLFDPRVRA 122 Query: 122 VTRPSDKLLLLWLLVTLGLGLSTIAESAQHRDGHMMVLLMTWAQHIITLRGDAASFIEAA 181 +RPSD L+++ L V L LGLS+I S QH DG MV M WAQ I T A+S++ A Sbjct: 123 SSRPSDTLIIILLWVQLLLGLSSIPVSLQHIDGGEMVKFMNWAQGIFTFNPAASSYVADA 182 Query: 182 PLLFKLHLFMGLTLFVIFPFTRLVHVWSGFASVTYLGRA-WQLVRPR 227 ++FK+H+F+GLT+F++FPFTRLVH+ S A V Y+ R +Q+VR R Sbjct: 183 SIVFKMHIFLGLTIFILFPFTRLVHMLS--APVRYIWRPGYQVVRER 227 >PA3872 [C] COG2181 Nitrate reductase gamma subunit Pae Pseudomonas aeruginosa Length = 227 Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 117/220 (53%), Positives = 152/220 (69%), Gaps = 4/220 (1%) Query: 9 YGIYPYIALVVFLLGSLVRFEREQYTWKSDSSQLLHAGRLRLGNLLFHVGVLGLFFGHLV 68 +GIYPY+AL++ L+GS RF+ QYTWK+ SSQ+L +R+ + LFHVGVL + GH V Sbjct: 8 FGIYPYVALLICLVGSWARFDLSQYTWKAGSSQMLSKKGMRVYSNLFHVGVLFILAGHFV 67 Query: 69 GLLTPVAVWDAIGVTHSFKQAVAMLAGGVFGTLCLLGLLILIHRRWTDARIAAVTRPSDK 128 GLLTP +V+ + T + KQ +AM++GG FG LC +GL LI RR TDAR+ A SD Sbjct: 68 GLLTPASVYHHLISTEN-KQLLAMVSGGFFGVLCFIGLSGLILRRLTDARVRATGNASDL 126 Query: 129 LLLLWLLVTLGLGLSTIAESAQHRDGHMMVLLMTWAQHIITLRG-DAASFIEAAPLLFKL 187 ++LL L L LGLSTI S H DG +MV+L WAQ I+TLR AA I L++KL Sbjct: 127 MILLVLYAQLILGLSTIVASTHHMDGSVMVMLAEWAQAIVTLRPLAAAEAIAPVGLVYKL 186 Query: 188 HLFMGLTLFVIFPFTRLVHVWSGFASVTYLGRAWQLVRPR 227 H+ +GLTLFV+FPFTRLVH+ S A V YLGR +Q+VR + Sbjct: 187 HVGLGLTLFVLFPFTRLVHIVS--APVWYLGRRYQIVRQK 224 >ZnarI [C] COG2181 Nitrate reductase gamma subunit EcZ Escherichia coli O157:H7 EDL933 Length = 225 Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 105/227 (46%), Positives = 151/227 (66%), Gaps = 3/227 (1%) Query: 1 MNYLHQFLYGIYPYIALVVFLLGSLVRFEREQYTWKSDSSQLLHAGRLRLGNLLFHVGVL 60 M +L+ F + IYPYIA VFL+GS +R++ QYTW++ SSQ+L + L + LFH+G+L Sbjct: 1 MQFLNMFFFDIYPYIAGAVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGIL 60 Query: 61 GLFFGHLVGLLTPVAVWDAIGVTHSFKQAVAMLAGGVFGTLCLLGLLILIHRRWTDARIA 120 G+F GH G+LTP +++A + KQ +AM AGG G LCL+G ++L+ RR R+ Sbjct: 61 GIFVGHFFGMLTPHWMYEAW-LPIEVKQKMAMFAGGASGVLCLIGGVLLLKRRLFSPRVR 119 Query: 121 AVTRPSDKLLLLWLLVTLGLGLSTIAESAQHRDGHMMVLLMTWAQHIITLRGDAASFIEA 180 A T +D L+L L++ LGL TI SAQH DG M+ L+ WAQ ++T G A+ ++ Sbjct: 120 ATTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASQHLDG 179 Query: 181 APLLFKLHLFMGLTLFVIFPFTRLVHVWSGFASVTYLGRAWQLVRPR 227 +F+LHL +G+TLF++FPF+RLVH+WS V YL R +QLVR R Sbjct: 180 VAFIFRLHLVLGMTLFLLFPFSRLVHIWS--VPVEYLTRKYQLVRAR 224 >ECs1732 [C] COG2181 Nitrate reductase gamma subunit Ecs Escherichia coli O157:H7 Length = 225 Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 105/227 (46%), Positives = 151/227 (66%), Gaps = 3/227 (1%) Query: 1 MNYLHQFLYGIYPYIALVVFLLGSLVRFEREQYTWKSDSSQLLHAGRLRLGNLLFHVGVL 60 M +L+ F + IYPYIA VFL+GS +R++ QYTW++ SSQ+L + L + LFH+G+L Sbjct: 1 MQFLNMFFFDIYPYIAGAVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGIL 60 Query: 61 GLFFGHLVGLLTPVAVWDAIGVTHSFKQAVAMLAGGVFGTLCLLGLLILIHRRWTDARIA 120 G+F GH G+LTP +++A + KQ +AM AGG G LCL+G ++L+ RR R+ Sbjct: 61 GIFVGHFFGMLTPHWMYEAW-LPIEVKQKMAMFAGGASGVLCLIGGVLLLKRRLFSPRVR 119 Query: 121 AVTRPSDKLLLLWLLVTLGLGLSTIAESAQHRDGHMMVLLMTWAQHIITLRGDAASFIEA 180 A T +D L+L L++ LGL TI SAQH DG M+ L+ WAQ ++T G A+ ++ Sbjct: 120 ATTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASQHLDG 179 Query: 181 APLLFKLHLFMGLTLFVIFPFTRLVHVWSGFASVTYLGRAWQLVRPR 227 +F+LHL +G+TLF++FPF+RLVH+WS V YL R +QLVR R Sbjct: 180 VAFIFRLHLVLGMTLFLLFPFSRLVHIWS--VPVEYLTRKYQLVRAR 224