BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3544.p         (100 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BS_yczJ [R] COG2329 Uncharacterized enzyme involved in biosynthe...    77   8e-15
DR1636 [R] COG2329 Uncharacterized enzyme involved in biosynthes...    69   2e-12
AGpA263 [R] COG2329 Uncharacterized enzyme involved in biosynthe...    60   9e-10
CC2132 Non COG                                                         33   0.19 
Ta0579 [R] COG2329 Uncharacterized enzyme involved in biosynthes...    33   0.19 

>BS_yczJ [R] COG2329 Uncharacterized enzyme involved in biosynthesis of
          extracellular polysaccharides Bsu Bacillus subtilis
          Length = 95

 Score = 77.0 bits (188), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 1/93 (1%)

Query: 1  MILELADIRIQPGKQAEFDEAIQRGLAQTISKARGYLGHKVQKGIESPERYLLMVYWATL 60
          M+ E A + I+ G + EF++A  R  A  IS  +GY+ H + K +E   +YLL+V W TL
Sbjct: 1  MVREAAMLHIKEGLEQEFEDAF-RQAAPIISGMKGYITHSLSKCMEETHKYLLLVEWETL 59

Query: 61 ENHTVDFRESPAFTEWRGIVGPFFAGAPQVEHF 93
          E+HT  FR S  + EW+ ++  F+   P VEHF
Sbjct: 60 EDHTEGFRGSSEYQEWKALLHRFYTPFPTVEHF 92


>DR1636 [R] COG2329 Uncharacterized enzyme involved in biosynthesis of
           extracellular polysaccharides Dra Deinococcus
           radiodurans
          Length = 122

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 1/96 (1%)

Query: 2   ILELADIRIQPGKQAEFDEAIQRGLAQTISKARGYLGHKVQKGIESPERYLLMVYWATLE 61
           +LE+A + ++PG Q    EA      + I+   GY  H++Q+ +E   +Y+L+V+W TLE
Sbjct: 24  VLEIAMLNVRPG-QTAEFEAAFAQAGRLIASIPGYRRHELQRCLEDAHKYVLLVWWDTLE 82

Query: 62  NHTVDFRESPAFTEWRGIVGPFFAGAPQVEHFALLT 97
            HTV FR S  + +WR ++  F+   P VEHF  +T
Sbjct: 83  AHTVGFRGSAEYGQWRALLHHFYDPFPVVEHFVPVT 118


>AGpA263 [R] COG2329 Uncharacterized enzyme involved in biosynthesis of
          extracellular polysaccharides Atu Agrobacterium
          tumefaciens strain C58 (Cereon)
          Length = 110

 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 1/93 (1%)

Query: 1  MILELADIRIQPGKQAEFDEAIQRGLAQTISKARGYLGHKVQKGIESPERYLLMVYWATL 60
          MI E+A + +Q  K +EF +A    +   + +ARGY GH + +G+E+PE + L+V W +L
Sbjct: 1  MIYEIAMLPVQKDKISEFRQAFG-DVVPLLKRARGYRGHVLAQGVETPEVFNLIVRWRSL 59

Query: 61 ENHTVDFRESPAFTEWRGIVGPFFAGAPQVEHF 93
           +HT  F  S    ++   +  +F+G P V H 
Sbjct: 60 NDHTPGFEASEDHEQFMEGIQDYFSGEPTVYHL 92


>CC2132 Non COG
          Length = 96

 Score = 32.7 bits (73), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 9/97 (9%)

Query: 1  MILELADIRIQPGKQAEFDEAIQRGLAQTISKARGYLGHKVQKGIESPERYLLMVYWAT- 59
          MI  +A +++QP K AEF++      A+  +   G L +++ +       Y ++  +A+ 
Sbjct: 1  MIGVVATLKVQPAKAAEFEKVFLDLAAKVKANEPGCLVYQLTRSKTEEGVYKVLELYASM 60

Query: 60 --LENH-TVDFRESPAFTEWRGIVGPFFAGAPQVEHF 93
            L++H   D+     F      +GP  AGAP +E+ 
Sbjct: 61 DALKHHGGTDY-----FKAAGAAMGPTMAGAPVIEYL 92


>Ta0579 [R] COG2329 Uncharacterized enzyme involved in biosynthesis of
          extracellular polysaccharides Tac Thermoplasma
          acidophilum
          Length = 98

 Score = 32.7 bits (73), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 9  RIQPGKQAEFDEAIQRGLAQTISKARGYLGHKVQKGIESPERYLLMVYWATLENHTVDFR 68
          R++ G + EF+      +A   S   G    ++ + +  P++Y++   W +LE    DF 
Sbjct: 9  RVKKGHEEEFERTFNSVMAMIKSSGMGIKEVRLYRDVNDPQQYMIFTEWESLEKFK-DFI 67

Query: 69 ESPAFTE 75
           S  F E
Sbjct: 68 ASRPFKE 74