BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3510.p         (81 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0964 Non COG                                                        59   3e-09
RSc1904 Non COG                                                        59   3e-09
YPO4031 Non COG                                                        39   0.002
ogrK Non COG                                                           39   0.003
Z0332 Non COG                                                          36   0.026

>RSc0964 Non COG
          Length = 73

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 43/64 (67%)

Query: 8  CPHCQSPVRAAKSRTMSTLMKEITYRCQNVDCGHTFVATLEISRTVSLSAMPNPEVSLPI 67
          CPHC S      SR +S + +E+  +C NV CGHTFV+ +E+ RT+S S+ P+PEV+  +
Sbjct: 3  CPHCGSVATIRTSRPVSRITRELYCQCSNVLCGHTFVSLVEVVRTLSPSSTPDPEVARQL 62

Query: 68 SPRA 71
          + R+
Sbjct: 63 AGRS 66


>RSc1904 Non COG
          Length = 82

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 1/75 (1%)

Query: 4  ISLPCPHCQSPVRAAKSRTMSTLMKEITYRCQNVDCGHTFVATLEISRTVSLSAMPNPEV 63
          + + CPHC S +    SR M+ L +E+  +C NV+C +T  A L   RT++ S  PNP+ 
Sbjct: 1  MKIKCPHCGSRMHIRSSREMTLLSRELYVQCPNVECAYTCAAILSAVRTIAPSMQPNPKA 60

Query: 64 SLPISPRAYLAPQGT 78
           LP+  RA L P+ T
Sbjct: 61 YLPVG-RARLLPENT 74


>YPO4031 Non COG
          Length = 81

 Score = 39.3 bits (90), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 29/56 (51%)

Query: 8  CPHCQSPVRAAKSRTMSTLMKEITYRCQNVDCGHTFVATLEISRTVSLSAMPNPEV 63
          CP C+       SR +S   KE  Y+CQN++C  TF +   + + ++   +  PE+
Sbjct: 4  CPVCKHASHTRASRYLSEQTKEAYYQCQNIECSCTFKSIESVDKIITRPPVKEPEI 59


>ogrK Non COG
          Length = 72

 Score = 38.9 bits (89), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 25/48 (52%)

Query: 6  LPCPHCQSPVRAAKSRTMSTLMKEITYRCQNVDCGHTFVATLEISRTV 53
            CP CQ    A  SR ++   KE  ++CQNV+C  TF+    + R +
Sbjct: 2  FHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYI 49


>Z0332 Non COG
          Length = 90

 Score = 35.8 bits (81), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 4  ISLPCPHCQSPVRAAKSRTMSTLMKEITYRCQNVDCGHTFVATLEISRTVSLSAMPNPEV 63
          ++L CP C +   A  S   +  +K   Y+CQN++C +TF A LE   T+ +    N + 
Sbjct: 1  MALKCPECGTTAHARTSAYEAPSVKRSWYQCQNLECSYTFTA-LESVDTIIMKPRRNEQE 59

Query: 64 S 64
          S
Sbjct: 60 S 60