BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3501.p (540 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl2824 [E] COG0747 ABC-type dipeptide transport system, peripla... 548 e-155 SMa1860 [E] COG0747 ABC-type dipeptide transport system, peripla... 537 e-152 mll7034 [E] COG0747 ABC-type dipeptide transport system, peripla... 531 e-150 mlr9210 [E] COG0747 ABC-type dipeptide transport system, peripla... 301 2e-81 SMc01642 [E] COG0747 ABC-type dipeptide transport system, peripl... 297 4e-80 >AGl2824 [E] COG0747 ABC-type dipeptide transport system, periplasmic component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 563 Score = 548 bits (1411), Expect = e-155, Method: Compositional matrix adjust. Identities = 266/528 (50%), Positives = 360/528 (68%), Gaps = 2/528 (0%) Query: 14 FTSIDDSG--RGISDGFTRRDMMRTLMAGSLLTLSSTSLIAVSNSAMAQTPKRGGKLRIA 71 +T DD+ + I G TRR+++ ++AG + + ++++ ++ A+A TP GG L+ A Sbjct: 35 WTRSDDAAVEQAIRRGATRRELLHMMLAGGVALSAGSAILGRASKAVAATPVSGGSLKAA 94 Query: 72 TQTSSTSDTLDPAKAAHATDYARVNLFYNGLTKLDSKLAPQMVLAEELLTSDAITWTVKL 131 +SST+DTLDPAKA+ +TDY R Y+ LT LD PQM LAE + T DA TWTVKL Sbjct: 95 GWSSSTADTLDPAKASLSTDYVRCCALYSRLTFLDVSGTPQMELAESIETKDAKTWTVKL 154 Query: 132 RRDVLFHDGKPFTPADVVYSLMRHKDPAVASKVKVVADQIESVKATGPNEVQIKLSGANA 191 R V FHDGK T DVVYSL RH DPAV SKV +A Q+ KA N V+I L+ NA Sbjct: 155 RSGVTFHDGKSLTADDVVYSLKRHLDPAVGSKVAKIAAQMTGFKAVDKNTVEITLANPNA 214 Query: 192 DFPVILSTAQFLIIRDGTTEFRTPNGTGAFKCKEFTPGVRTIAVRNENYWKSGMPYLDEV 251 D P IL+ F+I+ DG T+F NGTGAFK ++F PGVR++ +N NYWKSG P+LD Sbjct: 215 DLPSILALHHFMIVADGATDFSKGNGTGAFKLEKFEPGVRSVMAKNANYWKSGGPHLDSF 274 Query: 252 EVFGIPDEAARVNALLSGDVQWINDVNARSTERVRTTAGYTVMETKTGLYTDLVIRQDVA 311 E I D+ ARVNALLSGD+Q +N R+ + G + +T +G YT+L IR D A Sbjct: 275 EFMAISDDNARVNALLSGDIQLAAAINPRALRLLDKQDGVVMSKTTSGNYTNLNIRLDQA 334 Query: 312 PGNSMDFTLGMKYLIDREQIKTAAFRGYAVVANDQPIDPTNRFYFPGLPQRQYDPDKAKF 371 PGN DF GMK LI+REQI AA RG V NDQP+ P + +Y P L + +D DKAKF Sbjct: 335 PGNKTDFVAGMKSLINREQIIKAALRGLGEVGNDQPVPPMSPYYNPDLKPKAFDLDKAKF 394 Query: 372 YLQKAGVLGSTIPLVASVAATGSVDIAVLMQQSAQKIGLKLDVKRVPADGYWSNQWMKVP 431 + +KAGV+G +IP++AS AA S+D+A++MQ SA +IG+KLDV+RVP+DGYWSN W+K P Sbjct: 395 HFEKAGVIGQSIPVIASDAAGSSIDMAMIMQASAAQIGVKLDVQRVPSDGYWSNYWLKAP 454 Query: 432 LGFGNINPRPSADILFTQLFKSDAQWNESGWKNAQFDQLLVAARGETDFNKRKQMYADMQ 491 + FGNINPRP+ DILF+ L+ SDA WNES +K+ +FD++++ ARG D KRKQ+Y +M+ Sbjct: 455 IHFGNINPRPTPDILFSLLYASDAPWNESQYKSPKFDKMMLEARGLLDLEKRKQIYFEME 514 Query: 492 TLVHEKCGIGIPVFIVNLEGVSTKVKGITPVPLGAFMNYTCAEYVWLD 539 ++ ++ G IP +I N++ +S+K+KG+ PLG M Y AEYVWL+ Sbjct: 515 RMIADEAGTIIPAYISNVDAISSKLKGLEANPLGGMMGYAFAEYVWLE 562 >SMa1860 [E] COG0747 ABC-type dipeptide transport system, periplasmic component Sme Sinorhizobium meliloti Length = 536 Score = 537 bits (1384), Expect = e-152, Method: Compositional matrix adjust. Identities = 259/517 (50%), Positives = 355/517 (68%), Gaps = 2/517 (0%) Query: 24 ISDGFTRRDMMRTLMAGSLLTLSSTSLIAVSNSAMAQTPKRGGKLRIATQTSSTSDTLDP 83 I G TRR++++ ++AG + + ++ + +A+A TP GG LR A ++ST+DTLDP Sbjct: 20 IRRGATRRELLQMMLAGGAALSAGSLVLGRAGNAVAATPVSGGTLRAAGWSASTADTLDP 79 Query: 84 AKAAHATDYARVNLFYNGLTKLDSKLAPQMVLAEELLTSDAITWTVKLRRDVLFHDGKPF 143 AKA+ +TDY R FYN L LD PQM LAE + T DA TWTVKLR+ V FHDGKP Sbjct: 80 AKASLSTDYVRCCSFYNRLAFLDKGGTPQMELAEAIETKDAKTWTVKLRKGVTFHDGKPL 139 Query: 144 TPADVVYSLMRHKDPAVASKVKVVADQIESVKATGPNEVQIKLSGANADFPVILSTAQFL 203 DV++SL RH DP+V SKV +A Q+ KA V+I L+ NAD P ILS F+ Sbjct: 140 AADDVIFSLKRHLDPSVGSKVAKIAAQMTGFKAVDKQTVEITLASPNADLPTILSMHHFM 199 Query: 204 IIRDGTTEFRTPNGTGAFKCKEFTPGVRTIAVRNENYWKSGMPYLDEVEVFGIPDEAARV 263 I+ DGTT+F NGTGAF + F PGVR++ ++N+NYWKSG P +D E F I D+++RV Sbjct: 200 IVADGTTDFSKGNGTGAFVREVFEPGVRSVGIKNKNYWKSG-PNVDSFEYFAISDDSSRV 258 Query: 264 NALLSGDVQWINDVNARSTERVRTT-AGYTVMETKTGLYTDLVIRQDVAPGNSMDFTLGM 322 NALLSGD+ +N RS V + AG+ + +T +G YT+L +R D+ PG+ DF GM Sbjct: 259 NALLSGDIHLAATINPRSMRLVESQGAGFVLSKTTSGNYTNLNMRLDMEPGSKRDFVEGM 318 Query: 323 KYLIDREQIKTAAFRGYAVVANDQPIDPTNRFYFPGLPQRQYDPDKAKFYLQKAGVLGST 382 KYL++REQI +A RG V NDQP+ P N ++ P L R +DP+KAKF+ +KAG+LG + Sbjct: 319 KYLVNREQIVKSALRGLGEVGNDQPVSPANFYHNPDLKPRAFDPEKAKFHFEKAGMLGQS 378 Query: 383 IPLVASVAATGSVDIAVLMQQSAQKIGLKLDVKRVPADGYWSNQWMKVPLGFGNINPRPS 442 IP+VAS AA +VD+A+++Q SA +IGLKLDV+RVPADGYW N W+K P+ FGNINPRP+ Sbjct: 379 IPVVASDAANSAVDMAMIIQASAAEIGLKLDVQRVPADGYWDNYWLKAPVHFGNINPRPT 438 Query: 443 ADILFTQLFKSDAQWNESGWKNAQFDQLLVAARGETDFNKRKQMYADMQTLVHEKCGIGI 502 DILF+ L+ S+A WNES +K+ +FD++L+ ARG D +RK +Y +MQ +V + G I Sbjct: 439 PDILFSLLYSSEAPWNESQYKSEKFDKMLIEARGSLDQERRKAIYNEMQVMVASEAGTII 498 Query: 503 PVFIVNLEGVSTKVKGITPVPLGAFMNYTCAEYVWLD 539 P +I N++ ++ K+KG+ PLG M Y AEYVWL+ Sbjct: 499 PAYISNVDAITAKLKGLEANPLGGQMGYAFAEYVWLE 535 >mll7034 [E] COG0747 ABC-type dipeptide transport system, periplasmic component Mlo Mesorhizobium loti Length = 505 Score = 531 bits (1367), Expect = e-150, Method: Compositional matrix adjust. Identities = 251/490 (51%), Positives = 338/490 (68%) Query: 50 LIAVSNSAMAQTPKRGGKLRIATQTSSTSDTLDPAKAAHATDYARVNLFYNGLTKLDSKL 109 ++ + +A+A TP GG + A +SST+DTLDPAKA+ +TDY R YN LT LD Sbjct: 15 VLGRATNAVAATPVSGGTFKAAGWSSSTADTLDPAKASLSTDYVRCCSLYNRLTFLDKDG 74 Query: 110 APQMVLAEELLTSDAITWTVKLRRDVLFHDGKPFTPADVVYSLMRHKDPAVASKVKVVAD 169 QM LAE + DA TWTVKLR+ V FHDGK T DVVYSL RH D +V SKV +A Sbjct: 75 VTQMELAESFDSKDAKTWTVKLRKGVTFHDGKDLTADDVVYSLKRHLDKSVGSKVAKIAA 134 Query: 170 QIESVKATGPNEVQIKLSGANADFPVILSTAQFLIIRDGTTEFRTPNGTGAFKCKEFTPG 229 Q+ KA + V+I L+ NAD P IL+ F+I++DGTT+F NGTGAF + F PG Sbjct: 135 QMTGFKAVDKSTVEITLADPNADLPTILALHHFMIVQDGTTDFSKGNGTGAFVLQTFEPG 194 Query: 230 VRTIAVRNENYWKSGMPYLDEVEVFGIPDEAARVNALLSGDVQWINDVNARSTERVRTTA 289 VR++ +N+NYWKSG PYLD E I D++ARVNALLSGD+ + +N R+ + + Sbjct: 195 VRSVVTKNKNYWKSGKPYLDSFEFIAISDDSARVNALLSGDINFAASINPRAMKLIGGQQ 254 Query: 290 GYTVMETKTGLYTDLVIRQDVAPGNSMDFTLGMKYLIDREQIKTAAFRGYAVVANDQPID 349 G+ + +T +G YTDL IR D+ PGN DF GMKYL++REQI +A RG + NDQP+ Sbjct: 255 GFELSKTTSGNYTDLNIRLDMDPGNKADFVAGMKYLVNREQIVKSALRGLGEIGNDQPVS 314 Query: 350 PTNRFYFPGLPQRQYDPDKAKFYLQKAGVLGSTIPLVASVAATGSVDIAVLMQQSAQKIG 409 P N F+ P + + +DPDKAKF+ QK+G+LG +IP++AS AAT S+D+AV++Q + IG Sbjct: 315 PANIFHNPDIKPKAFDPDKAKFHFQKSGLLGQSIPVIASDAATSSIDMAVIIQAAGADIG 374 Query: 410 LKLDVKRVPADGYWSNQWMKVPLGFGNINPRPSADILFTQLFKSDAQWNESGWKNAQFDQ 469 +KLDV+RVP+DGYW N W+K P+ FGNINPRP+ DILF+ L+ S+A WNES +K+ +FD+ Sbjct: 375 MKLDVQRVPSDGYWDNYWLKAPIHFGNINPRPTPDILFSLLYASNAPWNESQYKSEKFDK 434 Query: 470 LLVAARGETDFNKRKQMYADMQTLVHEKCGIGIPVFIVNLEGVSTKVKGITPVPLGAFMN 529 LL+ ARG D KRK++Y MQ +V E+ G IP +I N++ +S+KVKG+ PLG M Sbjct: 435 LLIEARGSLDQAKRKEIYNQMQVMVSEEAGTIIPAYISNVDALSSKVKGLEANPLGGMMG 494 Query: 530 YTCAEYVWLD 539 Y AEY+WL+ Sbjct: 495 YAMAEYLWLE 504 >mlr9210 [E] COG0747 ABC-type dipeptide transport system, periplasmic component Mlo Mesorhizobium loti Length = 527 Score = 301 bits (772), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 183/517 (35%), Positives = 267/517 (51%), Gaps = 6/517 (1%) Query: 24 ISDGFTRRDMMRTLMAGSLLTLSSTSLIAVSNSAMAQTPKRGGKLRIATQTSSTSDTLDP 83 +S +RRD + A L + SL+ SN+A A P +GG L+ Q + +DTLD Sbjct: 13 VSGILSRRDFLGRAAALGLSAPFANSLL--SNAARAAQPVKGGTLKAGLQGGAATDTLDT 70 Query: 84 AKAAHATDYARVNLFYNGLTKLDSKLAPQMVLAEELLTS-DAITWTVKLRRDVLFHDGKP 142 A + + D + L ++D K Q LAEE +S DA WT K+R+ V FHDGK Sbjct: 71 AHFSTSVDITFGRAWGEQLVQIDPKGGLQPALAEEWGSSKDAKVWTFKIRKGVHFHDGKE 130 Query: 143 FTPADVVYSLMRHKDPAVASKVKVVADQIESVKATGPNEVQIKLSGANADFPVILSTAQF 202 TPADV+ ++ RH D S + I+ + G N V L NAD P ++ Sbjct: 131 MTPADVLATMERHSDKNSKSGALGIMQGIDKIAVDGQNVV-FTLKDPNADLPFLMDDYHL 189 Query: 203 LIIRDGTTEFRTPN-GTGAFKCKEFTPGVRTIAVRNENYWKSGMPYLDEVEVFGIPDEAA 261 +I +G + GTG +K PGVR + YW+ + D+VEV I D A Sbjct: 190 IIQPNGGKDNPAAGIGTGPYKVTTNEPGVRLGGEKFAGYWRDDRGFADQVEVIVINDATA 249 Query: 262 RVNALLSGDVQWINDVNARSTERVRTTAGYTVMETKTGLYTDLVIRQDVAPGNSMDFTLG 321 R++AL SG V +N V + + ++ G T+ + V R AP ++ D L Sbjct: 250 RMSALQSGQVHIVNFVQPKLVDLIKRVPGMTIRNVSGRGHYVFVARCKTAPFDNNDLRLA 309 Query: 322 MKYLIDREQIKTAAFRGYAVVANDQPIDPTNRFYFPGLPQRQYDPDKAKFYLQKAGVLGS 381 +K+ IDR+++ RGY V ND PI+ F + QR+YDPDKAKF+ +K+G G Sbjct: 310 LKFAIDRDEMLDKVLRGYGTVGNDFPINAAYPL-FTEVEQRKYDPDKAKFHYKKSGHDGP 368 Query: 382 TIPLVASVAATGSVDIAVLMQQSAQKIGLKLDVKRVPADGYWSNQWMKVPLGFGNINPRP 441 + + VA G+VD A L QQSA K G++L++KR P DGYWS W K P RP Sbjct: 369 VLLRTSDVAFPGAVDAAQLFQQSAAKAGIQLEIKREPGDGYWSEVWQKQPFCASYWGGRP 428 Query: 442 SADILFTQLFKSDAQWNESGWKNAQFDQLLVAARGETDFNKRKQMYADMQTLVHEKCGIG 501 + D +++ + S A WNES + N +FD++L AR E D KRK++YADM T+V+++ G Sbjct: 429 TQDQMYSVGYYSKADWNESQFVNDKFDKMLFQARAELDPEKRKKIYADMGTIVNQEGGTI 488 Query: 502 IPVFIVNLEGVSTKVKGITPVPLGAFMNYTCAEYVWL 538 +P+F ++ KV+G P Y W+ Sbjct: 489 VPMFNQFIDATGAKVEGWIDDPNYELSGYYALSRCWI 525 >SMc01642 [E] COG0747 ABC-type dipeptide transport system, periplasmic component Sme Sinorhizobium meliloti Length = 538 Score = 297 bits (760), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 184/537 (34%), Positives = 281/537 (52%), Gaps = 18/537 (3%) Query: 18 DDSGRGISD--GFTRRDMMRTLM--------AGSLLTLSSTSLIAVSNSAMAQTPKRGGK 67 ++ RG+SD + R +M M A +L +ST+ ++SA AQ PKRGG Sbjct: 4 EEGNRGMSDYKDYLARQVMLGKMNRREFLGRAAALGIAASTANTLFASSAAAQEPKRGGH 63 Query: 68 LRIATQTSSTSDTLDPAKAAHATDYARVNLFYNGLTKLDSKLA-PQMVLAEELLTS-DAI 125 L++ + ++ +D+ DPAKA + + + L + P LAE S DA Sbjct: 64 LKLGLEGAAATDSRDPAKALSQFMFVVGRNWGDMLVESHPTTGEPVPALAESWEPSADAA 123 Query: 126 TWTVKLRRDVLFHDGKPFTPADVVYSLMRHKDPAVASKVKVVADQIESVKATGPNEVQIK 185 TWT +R+ V FHDGK T DV+ +L RH D S V I+ +KA G +++ + Sbjct: 124 TWTFTIRKGVKFHDGKELTIDDVIKTLQRHTDEKSESGALGVMKSIKEIKADG-DKLVLT 182 Query: 186 LSGANADFPVILSTAQFLIIRDGTTEFRTPN---GTGAFKCKEFTPGVRTIAVRNENYWK 242 L+ NAD P++L+ +I +G T+ P+ GTG +K F PGVR RN + W+ Sbjct: 183 LTEGNADLPLLLTDYHLIIQPNGGTD--NPDAMIGTGPYKVASFEPGVRATFERNADDWR 240 Query: 243 SGMPYLDEVEVFGIPDEAARVNALLSGDVQWINDVNARSTERVRTTAGYTVMETKTGLYT 302 + Y+D VE+ + D AR+ AL SG V +IN V+ ++ ++ ++ T + Sbjct: 241 TDRGYVDSVELIAMNDATARIAALSSGQVHFINRVDPKTVNLLKKAPTVEILNTSGRGHY 300 Query: 303 DLVIRQDVAPGNSMDFTLGMKYLIDREQIKTAAFRGYAVVANDQPIDPTNRFYFPGLPQR 362 ++ + AP ++ D + +KY +DRE + GY V ND PI+ T + G+ QR Sbjct: 301 VFIMHCNTAPFDNNDLRMALKYAMDRETLVQRILGGYGKVGNDFPINDTYALFPEGIEQR 360 Query: 363 QYDPDKAKFYLQKAGVLGSTIPLVASVAATGSVDIAVLMQQSAQKIGLKLDVKRVPADGY 422 YDPDKA F+ +K+G G + + VA G+VD AVL Q SA+K G++++VKR P DGY Sbjct: 361 AYDPDKAAFHYKKSGHSGPVLLRTSDVAFPGAVDAAVLYQASAKKAGIEIEVKREPGDGY 420 Query: 423 WSNQWMKVPLGFGNINPRPSADILFTQLFKSDAQWNESGWKNAQFDQLLVAARGETDFNK 482 WSN W P RP+ D +++ + S A WN++ +K FD++L+ AR E D K Sbjct: 421 WSNVWNVQPFSTSYWGGRPTQDQMYSTAYLSTADWNDTRFKRPDFDKILLEARSELDEAK 480 Query: 483 RKQMYADMQTLVHEKCGIGIPVFIVNLEGVSTKVKGITPVPLGAFMNYTCAEYVWLD 539 RK MY M +V ++ G+ +P+F + VKG N A VWLD Sbjct: 481 RKDMYRTMAMMVRDEGGLILPMFNDFVNAAGKTVKGYVHDIGNDMSNGYVATRVWLD 537