BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3470.p         (1348 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

MPN271 Non COG                                                         37   0.35 
all2893 [R] COG0457 FOG Nos Nostoc sp. PCC 7120                        37   0.42 
mlr7286 [G] COG1129 ABC-type sugar transport system, ATPase comp...    33   3.3  
SA2237 [E] COG1125 ABC-type proline/glycine betaine transport sy...    33   4.7  
PA4024 [E] COG4303 Ethanolamine ammonia-lyase, large subunit Pae...    32   7.6  

>MPN271 Non COG
          Length = 251

 Score = 37.0 bits (84), Expect = 0.35,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 12/113 (10%)

Query: 824 WLAELKAGTLDWQRAADTFLGLATLVEEWEKKEF-ALYFHVARSVMLDEYGNQTNQALEA 882
           W  +  +G    +R    +  L   ++   KK+F A  F        D+ G QT + LE 
Sbjct: 142 WFGDYSSGDFTAKRGDKHYFYLFLKIKSDPKKQFSAKKFLTEGEAFTDQEGKQTTRNLEW 201

Query: 883 LELADSVC----GANAITTRARARIYFRGKKFAESLSAFEQLSSDLSMYGPLE 931
           +E + S+     G + ++ ++        KKF ES +     SSD++++  LE
Sbjct: 202 IEFSASISWWTKGKDDVSQKSL-------KKFLESFATNTGYSSDINLFSYLE 247


>all2893 [R] COG0457 FOG Nos Nostoc sp. PCC 7120
          Length = 268

 Score = 36.6 bits (83), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 971  LEPMFLGVRADHALAMYKAGNFDAAIAEIDSVLSDMPQTED-ESSLSAVYC 1020
            + P F   RA++A+A+Y+ G  D AI E+ +++   P   D  ++L+A+Y 
Sbjct: 169  IAPNFAFARANYAIALYETGQKDEAIREMRNIVRKYPNFADVRAALTAIYW 219


>mlr7286 [G] COG1129 ABC-type sugar transport system, ATPase component Mlo
           Mesorhizobium loti
          Length = 503

 Score = 33.5 bits (75), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 27/139 (19%)

Query: 309 LHQHQFLVLAGGSGLGKTLAARMVASRYE---GRWLILDLR---DMPAVEICRRIDTVIG 362
           LH  +  VL G +G GK+   ++V+  YE   G  ++ D     + PA  I   + TV  
Sbjct: 29  LHSGEVTVLMGANGAGKSTLVKIVSGLYERGGGSMILADQAFAPNTPAEAIRAGVVTVHQ 88

Query: 363 QIVSRSFEGIIVDDLNELETSAVTLKMARLLLAIKRQDGACIVTCY-----RQPSKAVAD 417
            I     +G++ D   ++ T+          L + R  G  + T +     R+ +KAVAD
Sbjct: 89  NI----NDGVVAD--LDVATN----------LTLDRLSGKGVPTLFNPARVRREAKAVAD 132

Query: 418 RLGIEVLPSVPVENLSFEE 436
           R+G+ +     V +LS  +
Sbjct: 133 RMGLAIDLKARVNDLSLAD 151


>SA2237 [E] COG1125 ABC-type proline/glycine betaine transport systems,
           ATPase components Sau Staphylococcus aureus N315
          Length = 410

 Score = 33.1 bits (74), Expect = 4.7,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 5/57 (8%)

Query: 313 QFLVLAGGSGLGKTLAARMV---ASRYEGRWLI--LDLRDMPAVEICRRIDTVIGQI 364
           +F+   G SG GKT A RM+       EG+  I   D+R M  VE+ R I  VI QI
Sbjct: 31  EFIAFIGTSGSGKTTALRMINRMIEATEGQIEIDGKDVRSMNPVELRRNIGYVIQQI 87


>PA4024 [E] COG4303 Ethanolamine ammonia-lyase, large subunit Pae
           Pseudomonas aeruginosa
          Length = 464

 Score = 32.3 bits (72), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 1/92 (1%)

Query: 141 ADVAPLRRALLSALSSDKVRQFIQTRNDEQLRGELLRQIHWDCQQEDLAGITEQ-LDASI 199
           A V+ + R     L + K+R   + RN   LRG L  ++  +   +D AGI    LD  +
Sbjct: 124 AAVSKIMRVQDLVLVAQKIRVVTRFRNTLGLRGRLSTRLQPNHPTDDPAGIAASILDGLL 183

Query: 200 IEFASERFGLSPTDCKGLTDRVLCEVLDAIVK 231
                   G++P      +   L E+LDAI++
Sbjct: 184 FGNGDAMLGINPATDSMASICALLEMLDAIIQ 215