BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3381.p (542 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0601 Non COG 561 e-159 RSc2562 Non COG 451 e-126 YPO1421 [R] COG3008 Paraquat-inducible protein B Ype Yersinia pe... 305 2e-82 ZpqiB [R] COG3008 Paraquat-inducible protein B EcZ Escherichia c... 286 9e-77 ECs1035 [R] COG3008 Paraquat-inducible protein B Ecs Escherichia... 286 9e-77 >RSc0601 Non COG Length = 547 Score = 561 bits (1447), Expect = e-159, Method: Compositional matrix adjust. Identities = 274/551 (49%), Positives = 387/551 (70%), Gaps = 21/551 (3%) Query: 1 MTPPDTPEDKPALLQPRRVRQRNWLPSLVWLIPIIAAIVGLTLVAKILVDRGPMVTVSFR 60 MT P D P PRR++++ WLPSL+WL+PI+A VG TL+ ++++ RG +TV+F Sbjct: 1 MTDPVDTRDIPP---PRRMKRKRWLPSLIWLVPIVALAVGATLMTRVILARGAQITVTFS 57 Query: 61 SAEGLEAGKTKVKYKDVEIGQVQTLKLASDRSHVLVGIQLNQEASGFNAEDTRFWVVRPR 120 SAEG+EAGKT+VKYK V+IG V+++ L DRS +V I+L ++ F DTR WVVRPR Sbjct: 58 SAEGIEAGKTRVKYKSVDIGVVKSVGLTDDRSGAVVLIELTRDGKAFAVADTRLWVVRPR 117 Query: 121 IAASGISGLGTLLSGAYIGADAGASEETKKNFVGLEQPPIVTRDVSGRQFVLHTDDLGSL 180 +AA ISGLGTLLSGAYIG D G ++E K F GL+ PP + D GRQF LH +DLGSL Sbjct: 118 VAAGSISGLGTLLSGAYIGVDGGRAKEHKSVFKGLDTPPAIYADTPGRQFTLHANDLGSL 177 Query: 181 DIGSPIFYRRIKVGQVVAYDLDSDGRGVTLRIFVNAPYDKFVTQGSRFWHASGFDMELNA 240 D G+P+++RR++VGQV +YD+D+DG+GVTL IFVNAP+D+FVT+ SRFW+ASG D++L+A Sbjct: 178 DTGAPVYFRRVRVGQVTSYDIDADGKGVTLHIFVNAPFDRFVTRSSRFWNASGIDLKLDA 237 Query: 241 SGFKLHTQALSTVVLGGIAFR-----DRDEYQTSAPAKEGTEYQLVEDESAAMKEPDGVP 295 SG K+ Q+L TV LGGIAF+ DRD PA + TE++LV +E+ A+K+P+ V Sbjct: 238 SGLKVDMQSLLTVALGGIAFQSPEDADRD------PAPQNTEFELVRNEAMALKDPEHVS 291 Query: 296 QTAVLYFDQSLRGLQPGATVDFRGVVLGEVKSIGVEYDKQRGEFRMPVMVQIYPDRLGRR 355 QT V+YF +SLRGL GA V+F+G+ +GE+KSIG+ Y K+R EF +PV +YP R G Sbjct: 292 QTVVMYFHRSLRGLTVGAPVEFKGINVGEIKSIGIHYSKERHEFVLPVTAVLYPTRFGMD 351 Query: 356 FQEETDGQRRSNAHL-LRTLVKRGLRAQLRNGNLLTGQLYVAIDFFPKAKPAQIDPDKTP 414 +++T + TL++ G+RAQL++ +LLTGQ +V +DF A + P Sbjct: 352 VRDDTAAHATEDTRAQFDTLIRNGMRAQLKSASLLTGQQFVQLDFVEPADRGKTPPRFGL 411 Query: 415 LE------LPTIPGSLDELQQQLSDIAGKLSKVPFDEIGHDLQTTLKTLNKTLSTAEQTA 468 E PT D+++ Q++ I KL+KVPF++IG D+ L +L+ TL EQ A Sbjct: 412 RERGGAYVFPTADNPTDDIEAQIAGIVKKLNKVPFEQIGQDVHRALNSLDATLKQTEQLA 471 Query: 469 AHINNDIAPEMQAAMKDARKTLNAAERTLSDDAPLQQDIRQTMQELSKAAASIRILTDYL 528 +NND+AP+M+ + +AR+TL A +T S+DAPLQ++ R T+++++KAAAS+R+LTDYL Sbjct: 472 KTVNNDLAPQMKDTLAEARRTLETARQTFSEDAPLQRNARDTLEQVAKAAASVRVLTDYL 531 Query: 529 QQHPESLIRGK 539 +HPE+LIRGK Sbjct: 532 DRHPEALIRGK 542 >RSc2562 Non COG Length = 558 Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust. Identities = 244/555 (43%), Positives = 344/555 (61%), Gaps = 25/555 (4%) Query: 1 MTPPDTPEDKPALLQPRRV----RQRN------------WLPSLVWLIPIIAAIVGLTLV 44 MT P P D P +PRR+ R R WL L+WL+P++AA+V + LV Sbjct: 1 MTKPSRP-DAPGDGRPRRLPGVARCRRDAAGHPPAHRLRWLQLLIWLVPMLAALVSIGLV 59 Query: 45 AKILVDRGPMVTVSFRSAEGLEAGKTKVKYKDVEIGQVQTLKLASDRSHVLVGIQLNQEA 104 A + GP +T+ F+ EG+E GKT V+Y DV+IG V ++L++D S VLV +QLNQEA Sbjct: 60 AGQVRGHGPAITLGFQDGEGIEPGKTPVRYNDVDIGMVTAVRLSTDLSRVLVTVQLNQEA 119 Query: 105 SGFNAEDTRFWVVRPRIAASGISGLGTLLSGAYIGADAGASEETKKNFVGLEQPPIVTRD 164 + F TRFW+VRPR SG SGLGTLLSG YIGAD+G S E + F GLE PP+V+ Sbjct: 120 ADFATHGTRFWIVRPRAGMSGASGLGTLLSGTYIGADSGGSHEPETQFTGLENPPVVSLR 179 Query: 165 VSGRQFVLHTDDLGSLDIGSPIFYRRIKVGQVVAYDLDSDGRGVTLRIFVNAPYDKFVTQ 224 G +FVL LGS++ GSP++YR ++VGQV LD DG GVT+ +F+ APY ++V + Sbjct: 180 QQGARFVLRGPSLGSVETGSPVYYRHVEVGQVTGTALDKDGAGVTIDVFIEAPYHRYVGR 239 Query: 225 GSRFWHASGFDMELNASGFKLHTQALSTVVLGGIAFRDRDEYQTSAPAKEGTEYQLVEDE 284 +++ HASG + L+A+G +++ ++ T++LGGIAF+ +GT + L + Sbjct: 240 DTQWRHASGLGLRLDAAGLRVNAESFQTMLLGGIAFQPSPGQPAGDAVPDGTVFGLQSGD 299 Query: 285 SAAMKEPDGVPQTAVLYFDQSLRGLQPGATVDFRGVVLGEVKSIGVEYDKQRGEFRMPVM 344 A PDG P T V++FDQSL GL GA VDFRGV LGEV ++GV +D + F MPV Sbjct: 300 LDAADGPDGKPSTVVMHFDQSLHGLSVGAAVDFRGVQLGEVTNVGVAFDPKTHTFVMPVT 359 Query: 345 VQIYPDRLGRRFQEETD-GQRRSNAHLLRTLVKRGLRAQLRNGNLLTGQLYVAIDFFPKA 403 + +YPDRLG+ F+ ++ G + LLRTLV RGLR QLR GNLLT QLYVA+D FP A Sbjct: 360 LNLYPDRLGQAFRASSEYGDAAAGKALLRTLVARGLRGQLRTGNLLTNQLYVALDMFPNA 419 Query: 404 KPAQIDPDKTPLELPTIPGSLDELQQQLSDIAGKLSKVPFDEIGHDLQTTLKTLNKTLST 463 P Q+D + T + LPTIP +LD+LQ Q++D+A L +VP D++G L + L Sbjct: 420 PPVQLDLNGTLIALPTIPNTLDDLQAQVADLAKTLDRVPLDQLG-------THLGQRLDN 472 Query: 464 AEQTAAHINNDIAPEMQAAMKDARKTLNAAERTLSDDAPLQQDIRQTMQELSKAAASIRI 523 A + A + +AP+ +A + AR+ +AA+ D+ + ++L + ++ Sbjct: 473 ARRLFALTDAQLAPQARATLAAARQAFDAAQAIAQSPLLRPADLSRVREQLGQTLRALDT 532 Query: 524 LTDYLQQHPESLIRG 538 LTD + QHPESL+ G Sbjct: 533 LTDTVAQHPESLVWG 547 >YPO1421 [R] COG3008 Paraquat-inducible protein B Ype Yersinia pestis Length = 541 Score = 305 bits (781), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 181/539 (33%), Positives = 299/539 (55%), Gaps = 30/539 (5%) Query: 22 RNWLPSLVWLIPIIAAIVGLTLVAKILVDRGPMVTVSFRSAEGLEAGKTKVKYKDVEIGQ 81 + W P VW+IPI+ A++G ++ ++GP V ++ +AEG+EAGKTK+K + V++G Sbjct: 8 KRWSP--VWIIPIVTALIGAWILFYHFSNQGPQVVLTTLNAEGIEAGKTKIKSRSVDVGM 65 Query: 82 VQTLKLASDRSHVLVGIQLNQEASGFNAEDTRFWVVRPRIAASGISGLGTLLSGAYIGAD 141 V+ + L+ D +HV++ +LN + DT FWVV+P+I GISGLGTLLSGAYI Sbjct: 66 VEKVTLSEDLNHVIIQARLNSGMNTLLHGDTVFWVVKPQIGREGISGLGTLLSGAYIELQ 125 Query: 142 AGASEETKKNFVGLEQPPIVTRDVSGRQFVLHTDDLGSLDIGSPIFYRRIKVGQVVAYDL 201 G++ + F L+ PP+ + D G + +L +D G L+ G P+ +R +VG V Sbjct: 126 PGSNGKALNEFRLLDSPPLASPDAKGLRIMLDSDQAGQLNAGDPVLFRGYRVGSVETSTF 185 Query: 202 DSDGRGVTLRIFVNAPYDKFVTQGSRFWHASGFDMELNASGFKLHTQALSTVVLGGIAFR 261 D R + ++F+ APYD VT RFW SG ++L++ G ++ +L+T+ GG++F Sbjct: 186 DPQSRLMRYQLFIGAPYDSLVTSNVRFWKDSGVAVDLSSQGMRVEMASLATLFSGGVSFD 245 Query: 262 DRDEYQTSAPA-KEGTEYQLVEDESAAMKEPDGVPQTAVLYFDQSLRGLQPGATVDFRGV 320 D + P ++ E++L +D S+ + +L+F S+RGLQ GA V+FRG+ Sbjct: 246 VPDGLEQGKPVTQDKAEFKLFDDRSSIQNSLYIEHENFLLFFSDSVRGLQSGAPVEFRGI 305 Query: 321 VLGEVKSIG--VEYDKQR--GEFRMPVMVQIYPDRLGRRFQEETDGQRRSNAHLLRTLVK 376 +G V + E KQ+ +FR+PV+++I P R +T+ + +L+T + Sbjct: 306 RVGTVGDVPFFAEGMKQQVDNDFRIPVLIRIEPGRFRDDLGPDTNFE-----QVLKTAKE 360 Query: 377 RGLRAQLRNGNLLTGQLYVAIDFFPKAKPAQIDPDKTPLE------LPTIPGSLDELQQQ 430 RGLRA L++GNLLTG L+V +DF+P AKP K P E LPTI G L ++QQ+ Sbjct: 361 RGLRASLKSGNLLTGALFVDLDFYPDAKPW-----KGPQEIAGYPLLPTISGGLAQIQQK 415 Query: 431 LSDIAGKLSKVPFDEIGHDLQTTLKTLNKTLSTAEQTAAHINNDIAPE-MQAAMKDARKT 489 + K++ +P + + +++ L KT+ ++ A +N + + MQ KD +KT Sbjct: 416 VMQTLDKINNLPLNPMVNEVTKALAESQKTMRETQKVLASLNTITSSQSMQELPKDLQKT 475 Query: 490 LNAAERTLSD---DAPLQQDIRQTMQELSKAAASIRILTDYLQQHPESLI---RGKQEP 542 LN R++ +P + MQ L + ++ + L + +L+ G Q+P Sbjct: 476 LNELNRSMKGFQPGSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVFEAAGSQDP 534 >ZpqiB [R] COG3008 Paraquat-inducible protein B EcZ Escherichia coli O157:H7 EDL933 Length = 546 Score = 286 bits (732), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 167/488 (34%), Positives = 261/488 (53%), Gaps = 15/488 (3%) Query: 22 RNWLPSLVWLIPIIAAIVGLTLVAKILVDRGPMVTVSFRSAEGLEAGKTKVKYKDVEIGQ 81 +NW P VW+ PI+ A++G ++ +GP VT+ +AEG+E GKT +K + V++G Sbjct: 14 KNWSP--VWIFPIVTALIGAWVLFYHYSHQGPEVTLITANAEGIEGGKTTIKSRSVDVGV 71 Query: 82 VQTLKLASDRSHVLVGIQLNQEASGFNAEDTRFWVVRPRIAASGISGLGTLLSGAYIGAD 141 V++ LA D +HV + +LN +DT FWVV+P+I GISGLGTLLSG YI Sbjct: 72 VESATLADDLTHVEIKARLNSGMEKLLHKDTVFWVVKPQIGREGISGLGTLLSGVYIELQ 131 Query: 142 AGASEETKKNFVGLEQPPIVTRDVSGRQFVLHTDDLGSLDIGSPIFYRRIKVGQVVAYDL 201 GA + L+ PP+ D G + VL + G L G P+ +R +VG V Sbjct: 132 PGAKGSKMDKYDLLDSPPLAPPDAKGIRVVLDSKKAGQLSPGDPVLFRGYRVGSVETSTF 191 Query: 202 DSDGRGVTLRIFVNAPYDKFVTQGSRFWHASGFDMELNASGFKLHTQALSTVVLGGIAFR 261 D+ R ++ ++F+NAPYD+ VT RFW SG ++L ++G ++ +L+T++ GG++F Sbjct: 192 DTQKRNISYQLFINAPYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFD 251 Query: 262 DRDEYQTSAPAKEGTEYQLVEDESAAMKEPDGVPQTAVLYFDQSLRGLQPGATVDFRGVV 321 + P T + L +D+ + +++F S+RGLQPGA V+FRG+ Sbjct: 252 VPEGLDLGQPVAPKTAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIR 311 Query: 322 LGEVKSIGVEYDKQRGEF----RMPVMVQIYPDRLGRRFQEETDGQRRSNAHLLRTLVKR 377 LG V + R F R+PV+++I P+RL + E D L L+KR Sbjct: 312 LGTVSKVPFFAPNMRQTFNDDYRIPVLIRIEPERLKMQLGENAD-----VVEHLGELLKR 366 Query: 378 GLRAQLRNGNLLTGQLYVAIDFFPKAKPA--QIDPDKTPLELPTIPGSLDELQQQLSDIA 435 GLR L+ GNL+TG LYV +DF+P PA I +PT+ G L ++QQ+L + Sbjct: 367 GLRGSLKTGNLVTGALYVDLDFYPNT-PAITGIREFNGYQIIPTVSGGLAQIQQRLMEAL 425 Query: 436 GKLSKVPFDEIGHDLQTTLKTLNKTLSTAEQTAAHINNDIAPE-MQAAMKDARKTLNAAE 494 K++K+P + + +TL +T+ + T +N +A + MQ D + TL Sbjct: 426 DKINKLPLNPMIEQATSTLSESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELN 485 Query: 495 RTLSDDAP 502 R++ P Sbjct: 486 RSMQGFQP 493 >ECs1035 [R] COG3008 Paraquat-inducible protein B Ecs Escherichia coli O157:H7 Length = 546 Score = 286 bits (732), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 167/488 (34%), Positives = 261/488 (53%), Gaps = 15/488 (3%) Query: 22 RNWLPSLVWLIPIIAAIVGLTLVAKILVDRGPMVTVSFRSAEGLEAGKTKVKYKDVEIGQ 81 +NW P VW+ PI+ A++G ++ +GP VT+ +AEG+E GKT +K + V++G Sbjct: 14 KNWSP--VWIFPIVTALIGAWVLFYHYSHQGPEVTLITANAEGIEGGKTTIKSRSVDVGV 71 Query: 82 VQTLKLASDRSHVLVGIQLNQEASGFNAEDTRFWVVRPRIAASGISGLGTLLSGAYIGAD 141 V++ LA D +HV + +LN +DT FWVV+P+I GISGLGTLLSG YI Sbjct: 72 VESATLADDLTHVEIKARLNSGMEKLLHKDTVFWVVKPQIGREGISGLGTLLSGVYIELQ 131 Query: 142 AGASEETKKNFVGLEQPPIVTRDVSGRQFVLHTDDLGSLDIGSPIFYRRIKVGQVVAYDL 201 GA + L+ PP+ D G + VL + G L G P+ +R +VG V Sbjct: 132 PGAKGSKMDKYDLLDSPPLAPPDAKGIRVVLDSKKAGQLSPGDPVLFRGYRVGSVETSTF 191 Query: 202 DSDGRGVTLRIFVNAPYDKFVTQGSRFWHASGFDMELNASGFKLHTQALSTVVLGGIAFR 261 D+ R ++ ++F+NAPYD+ VT RFW SG ++L ++G ++ +L+T++ GG++F Sbjct: 192 DTQKRNISYQLFINAPYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFD 251 Query: 262 DRDEYQTSAPAKEGTEYQLVEDESAAMKEPDGVPQTAVLYFDQSLRGLQPGATVDFRGVV 321 + P T + L +D+ + +++F S+RGLQPGA V+FRG+ Sbjct: 252 VPEGLDLGQPVAPKTAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIR 311 Query: 322 LGEVKSIGVEYDKQRGEF----RMPVMVQIYPDRLGRRFQEETDGQRRSNAHLLRTLVKR 377 LG V + R F R+PV+++I P+RL + E D L L+KR Sbjct: 312 LGTVSKVPFFAPNMRQTFNDDYRIPVLIRIEPERLKMQLGENAD-----VVEHLGELLKR 366 Query: 378 GLRAQLRNGNLLTGQLYVAIDFFPKAKPA--QIDPDKTPLELPTIPGSLDELQQQLSDIA 435 GLR L+ GNL+TG LYV +DF+P PA I +PT+ G L ++QQ+L + Sbjct: 367 GLRGSLKTGNLVTGALYVDLDFYPNT-PAITGIREFNGYQIIPTVSGGLAQIQQRLMEAL 425 Query: 436 GKLSKVPFDEIGHDLQTTLKTLNKTLSTAEQTAAHINNDIAPE-MQAAMKDARKTLNAAE 494 K++K+P + + +TL +T+ + T +N +A + MQ D + TL Sbjct: 426 DKINKLPLNPMIEQATSTLSESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELN 485 Query: 495 RTLSDDAP 502 R++ P Sbjct: 486 RSMQGFQP 493