BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3360.p (493 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2128 [G] COG1070 Sugar (pentulose and hexulose) kinases Rso R... 529 e-150 SMc03164 [G] COG1070 Sugar (pentulose and hexulose) kinases Sme ... 471 e-132 mlr5033 [G] COG1070 Sugar (pentulose and hexulose) kinases Mlo M... 466 e-131 AGl776 [G] COG1070 Sugar (pentulose and hexulose) kinases Atu Ag... 464 e-130 BMEI1386 [G] COG1070 Sugar (pentulose and hexulose) kinases Bme ... 458 e-128 >RSc2128 [G] COG1070 Sugar (pentulose and hexulose) kinases Rso Ralstonia solanacearum Length = 491 Score = 529 bits (1363), Expect = e-150, Method: Compositional matrix adjust. Identities = 274/485 (56%), Positives = 330/485 (68%), Gaps = 3/485 (0%) Query: 3 YLGIDLGTSEVKLVLTDPDSNIIATRSARLRVDHPHPLWSEQAPQAWWNATLDAIATLRA 62 YLGIDLGTSEVK++L PD ++ T A V PHP W+EQ P+ WW TL A+ LRA Sbjct: 2 YLGIDLGTSEVKVLLLAPDGTVVGTAGAPFTVSRPHPRWAEQHPEDWWQGTLAALGMLRA 61 Query: 63 TAPQAFQALRGIGISGQMHGATLLDRNGNVLRPAILWNDMRAHAECVELEALVPDAADIT 122 P AF +RGIG+SGQMHGA LLD+ VLRPAILWNDMR+ EC L PD I Sbjct: 62 RCPDAFARVRGIGLSGQMHGAVLLDQADRVLRPAILWNDMRSDDECALLTERAPDLHAIA 121 Query: 123 GNRAMPGFTAPKLLWLSKYEPAVYRAIDKVLLPKDYLGWKLTGEFVSEMSDAAGTLWLDV 182 GN AMPGFTAPKLLW++++EP V+ A VLLPKDYL ++LTG VS+ SDAAGTLWLDV Sbjct: 122 GNLAMPGFTAPKLLWVARHEPDVFAATTCVLLPKDYLRFRLTGAKVSDPSDAAGTLWLDV 181 Query: 183 ARRDWSERMLHATGLSRSHMPRLVEGSAVAGHLREDLRREWGISAPVVVAGGAGDNAASA 242 ARRDWS+ +L A LSR MPRLVEG+A +G LR DL RE G+ VVVAGG GDNAASA Sbjct: 182 ARRDWSDALLAACDLSRDQMPRLVEGNAPSGTLRADLARELGLDPRVVVAGGGGDNAASA 241 Query: 243 VGIGVIQAGDAFLSLGSSGVLFAATAQHAPNPQQGVHAFCHCLPGQWHQMSVILSAAASL 302 +GIG AGD F+SLG+SGVL + + PNP HAFCH +P +W M+V+LSAA+ L Sbjct: 242 LGIGATHAGDGFVSLGTSGVLSIVSDRFTPNPALATHAFCHAIPERWQLMTVVLSAASCL 301 Query: 303 HWLAGVLGREVPELVSAAERLTPEQQAQAPLFLPYLNGERTPHNDAAAKGVLFGMTSAHE 362 W+ + G + P L++ ERL P AQAPLFLPYL+GERTPHND A+GV FGMT A E Sbjct: 302 RWICTLTGTDEPTLLAEVERLDPGACAQAPLFLPYLSGERTPHNDPYAQGVFFGMTHATE 361 Query: 363 AAHLAYAVMEGVAFAMADGYAALQAAGTVLHSAAFVGGGSRSAFWGQLCATALGIPLRHH 422 AHL YAV+EGV ADG+ AL+ G + + +GGG+RS +W Q+ A AL + R H Sbjct: 362 RAHLGYAVLEGVTLGFADGFDALR--GIETDALSLIGGGARSQYWAQMIADALNVRTRQH 419 Query: 423 AGAEVGAALGAARLGRLAQTGEDVRDVCVAPEVLERYAPDQARQSQLMRRLEQYRRLYPC 482 G E GAALGAARLG LA G D V P V YAP+ AR + L RL +R LY Sbjct: 420 GGGETGAALGAARLGWLA-VGGDPDTVLAKPPVCAEYAPNAARHAALCERLVAFRELYRH 478 Query: 483 LAPEF 487 + P + Sbjct: 479 VQPLY 483 >SMc03164 [G] COG1070 Sugar (pentulose and hexulose) kinases Sme Sinorhizobium meliloti Length = 484 Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust. Identities = 257/482 (53%), Positives = 308/482 (63%), Gaps = 5/482 (1%) Query: 3 YLGIDLGTSEVKLVLTDPDSNIIATRSARLRVDHPHPLWSEQAPQAWWNATLDAIATLRA 62 YLG+DLGTS VK +L D + II + S L VD PHP WSEQ P W A +AIA LR Sbjct: 2 YLGLDLGTSGVKAMLMDGEQRIIGSASGALDVDRPHPGWSEQDPADWIRAAEEAIARLRE 61 Query: 63 TAPQAFQALRGIGISGQMHGATLLDRNGNVLRPAILWNDMRAHAECVELEALVPDAADIT 122 T QA A+RGIG+SGQMHGATLLD VLRP ILWND R+ E L+ P +T Sbjct: 62 THAQALAAVRGIGLSGQMHGATLLDEGDAVLRPCILWNDTRSFREAAALDG-DPQFRALT 120 Query: 123 GNRAMPGFTAPKLLWLSKYEPAVYRAIDKVLLPKDYLGWKLTGEFVSEMSDAAGTLWLDV 182 GN PGFTAPKL W+ + EP ++ + VLLPKDYL LTGE +SEMSD+AGT WLD Sbjct: 121 GNIVFPGFTAPKLAWVRENEPEIFARVRWVLLPKDYLRLWLTGEHMSEMSDSAGTSWLDT 180 Query: 183 ARRDWSERMLHATGLSRSHMPRLVEGSAVAGHLREDLRREWGISAPVVVAGGAGDNAASA 242 +R WS +L AT L MP LVEG+ AG LR +L WG+ VVVAGGAGDNAASA Sbjct: 181 GKRKWSASLLAATHLEERQMPDLVEGTDAAGTLRPELAARWGMGPGVVVAGGAGDNAASA 240 Query: 243 VGIGVIQAGDAFLSLGSSGVLFAATAQHAPNPQQGVHAFCHCLPGQWHQMSVILSAAASL 302 G+G + G AF+SLG+SGVLFAA A + PNP+ VHAFCH LP WHQM VILSA +L Sbjct: 241 CGMGTVGEGQAFVSLGTSGVLFAANASYLPNPESAVHAFCHALPNTWHQMGVILSATDAL 300 Query: 303 HWLAGVLGREVPELVSAAERLTPEQQAQAPL-FLPYLNGERTPHNDAAAKGVLFGMTSAH 361 +W +GV GR EL S L +A + FLPYL+GERTPHNDA +GV G+ Sbjct: 301 NWHSGVTGRSAAELTS---ELGESLKAPGSVTFLPYLSGERTPHNDATIRGVFAGLGHES 357 Query: 362 EAAHLAYAVMEGVAFAMADGYAALQAAGTVLHSAAFVGGGSRSAFWGQLCATALGIPLRH 421 A L AV+EGV+FA+ D AL+AAGT L +GGGSRS +W ATAL +P+ Sbjct: 358 SRAVLTQAVLEGVSFAIRDSLEALRAAGTKLKRVTAIGGGSRSRYWLSSIATALNLPVDL 417 Query: 422 HAGAEVGAALGAARLGRLAQTGEDVRDVCVAPEVLERYAPDQARQSQLMRRLEQYRRLYP 481 A + GAA GAARLG +A TG D VC APE E AP+ + ++YRRLYP Sbjct: 418 PADGDFGAAFGAARLGLIAATGADPAAVCTAPETAETIAPEASLVPAYEDAYQRYRRLYP 477 Query: 482 CL 483 + Sbjct: 478 AI 479 >mlr5033 [G] COG1070 Sugar (pentulose and hexulose) kinases Mlo Mesorhizobium loti Length = 484 Score = 466 bits (1200), Expect = e-131, Method: Compositional matrix adjust. Identities = 250/481 (51%), Positives = 303/481 (62%), Gaps = 3/481 (0%) Query: 3 YLGIDLGTSEVKLVLTDPDSNIIATRSARLRVDHPHPLWSEQAPQAWWNATLDAIATLRA 62 YLG+DLGTS VK +L D ++ + L V PHP WSEQ P W A DAIA L+A Sbjct: 2 YLGLDLGTSGVKALLIDAGQTVVGSGHGSLDVSRPHPGWSEQDPSHWIRACEDAIAELKA 61 Query: 63 TAPQAFQALRGIGISGQMHGATLLDRNGNVLRPAILWNDMRAHAECVELEALVPDAADIT 122 + P+ F A++GIG+SGQMHGATLLD +VLRP ILWND R+H E L+A P +T Sbjct: 62 SHPRQFAAVKGIGLSGQMHGATLLDAADHVLRPCILWNDTRSHVEAAVLDA-DPRFRKLT 120 Query: 123 GNRAMPGFTAPKLLWLSKYEPAVYRAIDKVLLPKDYLGWKLTGEFVSEMSDAAGTLWLDV 182 GN PGFTAPKL W+ EPAV+ + KVLLPKD+L LTGE +SEMSD+AGT WLDV Sbjct: 121 GNIVFPGFTAPKLAWVKNNEPAVFAKVAKVLLPKDFLRLWLTGEHISEMSDSAGTSWLDV 180 Query: 183 ARRDWSERMLHATGLSRSHMPRLVEGSAVAGHLREDLRREWGISAPVVVAGGAGDNAASA 242 +R WS +L AT L MP LVEG+ AG LR +L +WG+ A + VAGGAGDNAASA Sbjct: 181 GKRRWSAELLAATSLDEKQMPSLVEGTEKAGGLRAELASKWGVEAGIPVAGGAGDNAASA 240 Query: 243 VGIGVIQAGDAFLSLGSSGVLFAATAQHAPNPQQGVHAFCHCLPGQWHQMSVILSAAASL 302 G+G + AG AF+SLG+SGVLFAA A + PNP VH FCH LP WHQM VILSA SL Sbjct: 241 CGMGTVGAGHAFVSLGTSGVLFAANASYLPNPASAVHTFCHALPDTWHQMGVILSATDSL 300 Query: 303 HWLAGVLGREVPELVSAAERLTPEQQAQAPLFLPYLNGERTPHNDAAAKGVLFGMTSAHE 362 +WL+ + G+ EL AE + FLPYL+GERTPHND+A +G G+ Sbjct: 301 NWLSEITGKGAGELT--AELGDTLKAPTGVSFLPYLSGERTPHNDSAIRGSFTGLAHESS 358 Query: 363 AAHLAYAVMEGVAFAMADGYAALQAAGTVLHSAAFVGGGSRSAFWGQLCATALGIPLRHH 422 A L AV+EGVAFA D AL+ AGT L +GGGSRS +W + ATAL +P+ Sbjct: 359 RAVLTQAVLEGVAFAFRDSLEALKTAGTTLTRVTAIGGGSRSRYWLKSIATALQVPVDIP 418 Query: 423 AGAEVGAALGAARLGRLAQTGEDVRDVCVAPEVLERYAPDQARQSQLMRRLEQYRRLYPC 482 A + GAA GAARLG +A TG D VC AP PD +YR LYP Sbjct: 419 ADGDFGAAFGAARLGLIAATGADPLAVCSAPRTDATIEPDAKLGGAYADAYHRYRALYPA 478 Query: 483 L 483 + Sbjct: 479 I 479 >AGl776 [G] COG1070 Sugar (pentulose and hexulose) kinases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 488 Score = 464 bits (1194), Expect = e-130, Method: Compositional matrix adjust. Identities = 247/483 (51%), Positives = 303/483 (62%), Gaps = 7/483 (1%) Query: 3 YLGIDLGTSEVKLVLTDPDSNIIATRSARLRVDHPHPLWSEQAPQAWWNATLDAIATLRA 62 YLG+DLGTS VK +L D D II + + L V PH WSEQ P W AT A+A L+ Sbjct: 6 YLGLDLGTSGVKALLMDGDQKIIGSANGSLDVSRPHHGWSEQNPADWIAATKTAVAGLKQ 65 Query: 63 TAPQAFQALRGIGISGQMHGATLLDRNGNVLRPAILWNDMRAHAECVELEALVPDAADIT 122 + A++GIG+SGQMHGATL+D G VLRP ILWND R+HAE L+A P IT Sbjct: 66 KFAKELAAVKGIGLSGQMHGATLVDAEGKVLRPCILWNDTRSHAEAAALDA-DPRFRKIT 124 Query: 123 GNRAMPGFTAPKLLWLSKYEPAVYRAIDKVLLPKDYLGWKLTGEFVSEMSDAAGTLWLDV 182 GN PGFTAPKL W++K EP ++ + KVLLPKDYL LTGE++SEMSD+AGT WLD Sbjct: 125 GNIVFPGFTAPKLAWVAKNEPDIFAKVAKVLLPKDYLRLWLTGEYISEMSDSAGTSWLDT 184 Query: 183 ARRDWSERMLHATGLSRSHMPRLVEGSAVAGHLREDLRREWGISAPVVVAGGAGDNAASA 242 R WS +L ATGL HMP LVEG+ AG LR +L EWGIS VVAGGAGDNAASA Sbjct: 185 GARKWSPELLAATGLDEKHMPSLVEGTDEAGVLRTELASEWGISGRAVVAGGAGDNAASA 244 Query: 243 VGIGVIQAGDAFLSLGSSGVLFAATAQHAPNPQQGVHAFCHCLPGQWHQMSVILSAAASL 302 G+G ++ G AF+SLG+SGVLFAA A + P P+ VHAFCH LP WHQM VILSA +L Sbjct: 245 CGMGTVKEGHAFVSLGTSGVLFAANASYLPKPESAVHAFCHALPNTWHQMGVILSATDAL 304 Query: 303 HWLAGVLGREVPELVS--AAERLTPEQQAQAPLFLPYLNGERTPHNDAAAKGVLFGMTSA 360 +W + + G+ +L L P F PYL+GERTPHNDAA +G G++ Sbjct: 305 NWYSRLTGQSAADLTGELGETLLAP----TGVTFAPYLSGERTPHNDAAIRGSFIGLSHE 360 Query: 361 HEAAHLAYAVMEGVAFAMADGYAALQAAGTVLHSAAFVGGGSRSAFWGQLCATALGIPLR 420 + L AV+EGV FA+ D AL++AGT + +GGGSRSA+W AT+LG+P+ Sbjct: 361 SDRKALTQAVLEGVTFAIRDNLEALKSAGTSISRVTAIGGGSRSAYWLASIATSLGVPVD 420 Query: 421 HHAGAEVGAALGAARLGRLAQTGEDVRDVCVAPEVLERYAPDQARQSQLMRRLEQYRRLY 480 A + GAA GAARLG +A TG D VC PE P A +Y LY Sbjct: 421 IPAEGDFGAAFGAARLGLIAATGADPVAVCSQPETARTIEPVAALGDAYEEAYRRYHALY 480 Query: 481 PCL 483 P + Sbjct: 481 PAI 483 >BMEI1386 [G] COG1070 Sugar (pentulose and hexulose) kinases Bme Brucella melitensis Length = 483 Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust. Identities = 245/488 (50%), Positives = 306/488 (62%), Gaps = 17/488 (3%) Query: 3 YLGIDLGTSEVKLVLTDPDSNIIATRSARLRVDHPHPLWSEQAPQAWWNATLDAIATLRA 62 YLG+DLGTS VK +L D N + L V PHP WSEQ P W A AI LRA Sbjct: 2 YLGLDLGTSGVKALLIDEAQNPVGAAHGELDVSRPHPGWSEQDPAQWIKACRTAIEALRA 61 Query: 63 TAPQAFQALRGIGISGQMHGATLLDRNGNVLRPAILWNDMRAHAECVELEALVPDAADIT 122 P+ F A+ GIG+SGQMHGATLLD VLRP ILWND R++ E EL+A P IT Sbjct: 62 AHPKEFSAITGIGLSGQMHGATLLDAEDRVLRPCILWNDTRSYREAAELDA-DPAFRAIT 120 Query: 123 GNRAMPGFTAPKLLWLSKYEPAVYRAIDKVLLPKDYLGWKLTGEFVSEMSDAAGTLWLDV 182 GN P FTAPKL+W+++ E ++ I KVLLPKDYL LTGE++S+MSD+AGT WLD Sbjct: 121 GNTVFPSFTAPKLVWVARNEADIFARIRKVLLPKDYLRLWLTGEYISDMSDSAGTSWLDT 180 Query: 183 ARRDWSERMLHATGLSRSHMPRLVEGSAVAGHLREDLRREWGISAPVVVAGGAGDNAASA 242 R WS +L TGL MP+LVEGS AG LR +L EW ++A V+VAGGAGDNAA A Sbjct: 181 GARRWSAELLAKTGLGEGQMPQLVEGSEAAGCLRAELAAEWSLTASVIVAGGAGDNAAPA 240 Query: 243 VGIGVIQAGDAFLSLGSSGVLFAATAQHAPNPQQGVHAFCHCLPGQWHQMSVILSAAASL 302 G+G ++ G AF+SLG+SGVLFAA + P P+ VHAFCH LP WHQM VILSAA++L Sbjct: 241 CGMGTVKPGHAFVSLGTSGVLFAANGAYQPKPESAVHAFCHALPRTWHQMGVILSAASAL 300 Query: 303 HWLAGVLG-------REVPELVSAAERLTPEQQAQAPLFLPYLNGERTPHNDAAAKGVLF 355 W + ++G RE+ E + A +T FLPYL+GERTP+NDA +G Sbjct: 301 EWYSKIVGATPQSLDRELGETLKAPGSVT---------FLPYLSGERTPYNDAKIRGSFC 351 Query: 356 GMTSAHEAAHLAYAVMEGVAFAMADGYAALQAAGTVLHSAAFVGGGSRSAFWGQLCATAL 415 G+ + + L AV+EGVAFA+ D ALQ+AGT + S VGGGSRS +W + ATAL Sbjct: 352 GLEHEADRSALTQAVLEGVAFAIRDNLLALQSAGTEITSLTAVGGGSRSTYWLKAIATAL 411 Query: 416 GIPLRHHAGAEVGAALGAARLGRLAQTGEDVRDVCVAPEVLERYAPDQARQSQLMRRLEQ 475 +P+ + GAA GAARLG +A TG D +C P+ P+QA S ++ Sbjct: 412 NVPIALPEEGDFGAAFGAARLGLIAATGADPFTICTPPQTARTIEPEQALLSAYDEAYQR 471 Query: 476 YRRLYPCL 483 Y LYP L Sbjct: 472 YHALYPAL 479