BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3342.p (1177 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value alr1883_5 [T] COG0784 FOG Nos Nostoc sp. PCC 7120 382 e-105 alr1121_4 [T] COG0784 FOG Nos Nostoc sp. PCC 7120 374 e-103 alr1883_4 [T] COG0642 Signal transduction histidine kinase Nos N... 286 1e-76 alr1121_3 [T] COG0642 Signal transduction histidine kinase Nos N... 281 5e-75 mll2385_3 [T] COG0642 Signal transduction histidine kinase Mlo M... 265 4e-70 >alr1883_5 [T] COG0784 FOG Nos Nostoc sp. PCC 7120 Length = 389 Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust. Identities = 186/392 (47%), Positives = 277/392 (70%), Gaps = 5/392 (1%) Query: 784 RLILVIEDDAAFAMILRDLAHEMGFQCVVTLSANEGVAAAEMYRPSAILMDMNLPDFSGL 843 RL+L+I+DD FA IL D+A + GF+ +V+L++ +G+A A+ Y+P+AI +D+ +PD G Sbjct: 1 RLLLIIDDDDKFARILLDMARQQGFKAIVSLNSKQGLALAQQYQPNAITLDIYMPDMDGW 60 Query: 844 GVLDQIKRNPRTRHIPVHVVSVADYSQEALERGAIGYALKPVQREELVGAIRKLEAKFLQ 903 +LD++K +P+TRHIPVH++SV D Q AL+ GAI + KPV E L + ++++ + Sbjct: 61 TLLDRLKHDPQTRHIPVHILSVDDREQRALQLGAITFLQKPVSPEILNHTLTEIKSFIDR 120 Query: 904 GLRHVLVVEDDARQLDSIRQLLAGENINLVGVRTAADALARLRETTFDCMVMDLNLPDLS 963 ++ +LV+EDD Q SI +L+ ++ + V T A AL LR FDC+V+DL LPD+S Sbjct: 121 KVKRLLVIEDDPVQAQSIIELIGNGDVQSIAVNTGAAALDILRSQHFDCIVLDLGLPDMS 180 Query: 964 GYQLLEKMAEQEHVAFPPVIVYTGRSLSAEEEQNLRRFSRSIIIKDARSPERLLDEVTLF 1023 G QLLE++ ++ + P+IVYTG+ +S +EE LRR + SIIIK+ RSPERLLDE +LF Sbjct: 181 GLQLLEQIKQEPSLLKLPIIVYTGKEISRQEETQLRRLAESIIIKNVRSPERLLDETSLF 240 Query: 1024 LHQIETTLPPESQRLLKVARDRETVFEGRRILVVEDDVRNIFALSSVLEPKGMKVDIARN 1083 LH+++ LP +++L+ +T+ R+IL+++DD+RNIFA++S+LE M+V A N Sbjct: 241 LHRVQANLPQPQRQILEQLHQTDTILANRKILIIDDDLRNIFAITSLLESYQMQVLFAEN 300 Query: 1084 GREALQALQRSQEQPGAPIDLVLMDIMMPEMDGLTAMREIRKQAIWKRLPIIALTAKAMK 1143 GR+ + LQ + + I+ VLMD+MMPEMDG R IR+Q ++ LPIIALTAKAM Sbjct: 301 GRDGIDILQANPD-----INAVLMDVMMPEMDGYETTRSIRQQKQFRTLPIIALTAKAMP 355 Query: 1144 DDQEKCLAAGANDYIAKPLDVEKLLSLVRVWM 1175 D+EKC+ AGA+DYI KP+D E+LLSL+RVW+ Sbjct: 356 GDREKCIEAGASDYITKPVDTEQLLSLLRVWL 387 Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 66/276 (23%), Positives = 133/276 (48%), Gaps = 32/276 (11%) Query: 779 IEAASRLILVIEDDAAFAMILRDLAHEMGFQCVVTLSANEGVAAAEMYRP---SAILMDM 835 I+ + +LVIEDD A + +L +G V +++ N G AA ++ R I++D+ Sbjct: 118 IDRKVKRLLVIEDDPVQAQSIIEL---IGNGDVQSIAVNTGAAALDILRSQHFDCIVLDL 174 Query: 836 NLPDFSGLGVLDQIKRNPRTRHIPVHVVSVADYSQE---ALERGAIGYALKPVQR----- 887 LPD SGL +L+QIK+ P +P+ V + + S++ L R A +K V+ Sbjct: 175 GLPDMSGLQLLEQIKQEPSLLKLPIIVYTGKEISRQEETQLRRLAESIIIKNVRSPERLL 234 Query: 888 EELVGAIRKLEAKFLQ----------------GLRHVLVVEDDARQLDSIRQLLAGENIN 931 +E + +++A Q R +L+++DD R + +I LL + Sbjct: 235 DETSLFLHRVQANLPQPQRQILEQLHQTDTILANRKILIIDDDLRNIFAITSLLESYQMQ 294 Query: 932 LVGVRTAADALARLR-ETTFDCMVMDLNLPDLSGYQLLEKMAEQEHVAFPPVIVYTGRSL 990 ++ D + L+ + ++MD+ +P++ GY+ + +Q+ P+I T +++ Sbjct: 295 VLFAENGRDGIDILQANPDINAVLMDVMMPEMDGYETTRSIRQQKQFRTLPIIALTAKAM 354 Query: 991 SAEEEQNLRRFSRSIIIKDARSPERLLDEVTLFLHQ 1026 + E+ + + I K + E+LL + ++L++ Sbjct: 355 PGDREKCIEAGASDYITKPVDT-EQLLSLLRVWLYR 389 >alr1121_4 [T] COG0784 FOG Nos Nostoc sp. PCC 7120 Length = 389 Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust. Identities = 185/391 (47%), Positives = 271/391 (69%), Gaps = 5/391 (1%) Query: 785 LILVIEDDAAFAMILRDLAHEMGFQCVVTLSANEGVAAAEMYRPSAILMDMNLPDFSGLG 844 ++L+IEDD FA IL D+A + GFQ + S G+ A+ ++P AIL+D+ LP+ G Sbjct: 2 ILLIIEDDVNFARILVDMARQHGFQVLTAQSGTAGLKLAKDFQPMAILLDIRLPEMDGWT 61 Query: 845 VLDQIKRNPRTRHIPVHVVSVADYSQEALERGAIGYALKPVQREELVGAIRKLEAKFLQG 904 VLD++K +P TRHIPVH+++V + Q L+ GAI Y KPV E + A+ K+ + Sbjct: 62 VLDRLKHDPTTRHIPVHIMTVEEGRQRGLQLGAIAYLQKPVTSEAISEALDKIRGFVERR 121 Query: 905 LRHVLVVEDDARQLDSIRQLLAGENINLVGVRTAADALARLRETTFDCMVMDLNLPDLSG 964 ++++LVVEDD Q SI +L+ ++ V V T A AL +R FDC+V+DL LPD++G Sbjct: 122 VKNLLVVEDDELQRQSIVELIGNSDVATVAVGTGAAALEAIRTQQFDCLVLDLGLPDMTG 181 Query: 965 YQLLEKMAEQEHVAFPPVIVYTGRSLSAEEEQNLRRFSRSIIIKDARSPERLLDEVTLFL 1024 ++L+E++ + + A P+IVYTGR +S +E LRR + +II+KD RSPERLLDE LFL Sbjct: 182 FELMEQIKREANGATLPIIVYTGREISKNQETELRRIAETIIVKDVRSPERLLDETALFL 241 Query: 1025 HQIETTLPPESQRLLKVARDRETVFEGRRILVVEDDVRNIFALSSVLEPKGMKVDIARNG 1084 H+++ LP + +L+ ++ G+++L+V+DDVRNIFAL+S+LE M+V A NG Sbjct: 242 HRVQANLPTPKREILEQLHSQDYSLVGKKVLIVDDDVRNIFALTSMLERYQMQVIYAENG 301 Query: 1085 REALQALQRSQEQPGAPIDLVLMDIMMPEMDGLTAMREIRKQAIWKRLPIIALTAKAMKD 1144 RE + L+ + + ID+VLMD+MMPEMDG M+ IRK+ +K LPIIALTAKAM+ Sbjct: 302 REGISLLENTSD-----IDVVLMDVMMPEMDGYETMQLIRKKEQFKALPIIALTAKAMQG 356 Query: 1145 DQEKCLAAGANDYIAKPLDVEKLLSLVRVWM 1175 D+++C+AAGA+DYIAKP+D E+LLSL+RVW+ Sbjct: 357 DRDQCIAAGASDYIAKPVDTEQLLSLLRVWL 387 Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 63/284 (22%), Positives = 137/284 (48%), Gaps = 32/284 (11%) Query: 771 AIDDDRDRIEAASRLILVIEDDAAFAMILRDLAHEMGFQCVVTLSANEGVAAAEMYRP-- 828 A+D R +E + +LV+EDD + + + +G V T++ G AA E R Sbjct: 110 ALDKIRGFVERRVKNLLVVEDDE---LQRQSIVELIGNSDVATVAVGTGAAALEAIRTQQ 166 Query: 829 -SAILMDMNLPDFSGLGVLDQIKRNPRTRHIPVHVVS---VADYSQEALERGAIGYALKP 884 +++D+ LPD +G +++QIKR +P+ V + ++ + L R A +K Sbjct: 167 FDCLVLDLGLPDMTGFELMEQIKREANGATLPIIVYTGREISKNQETELRRIAETIIVKD 226 Query: 885 VQR-----EELVGAIRKLEAKF-------LQGL---------RHVLVVEDDARQLDSIRQ 923 V+ +E + +++A L+ L + VL+V+DD R + ++ Sbjct: 227 VRSPERLLDETALFLHRVQANLPTPKREILEQLHSQDYSLVGKKVLIVDDDVRNIFALTS 286 Query: 924 LLAGENINLVGVRTAADALARLRETT-FDCMVMDLNLPDLSGYQLLEKMAEQEHVAFPPV 982 +L + ++ + ++ L T+ D ++MD+ +P++ GY+ ++ + ++E P+ Sbjct: 287 MLERYQMQVIYAENGREGISLLENTSDIDVVLMDVMMPEMDGYETMQLIRKKEQFKALPI 346 Query: 983 IVYTGRSLSAEEEQNLRRFSRSIIIKDARSPERLLDEVTLFLHQ 1026 I T +++ + +Q + + I K + E+LL + ++L++ Sbjct: 347 IALTAKAMQGDRDQCIAAGASDYIAKPVDT-EQLLSLLRVWLYR 389 >alr1883_4 [T] COG0642 Signal transduction histidine kinase Nos Nostoc sp. PCC 7120 Length = 365 Score = 286 bits (733), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 178/380 (46%), Positives = 238/380 (62%), Gaps = 42/380 (11%) Query: 423 ELRVNNEELEEQGQALKASQLRLETQQAELEETNAQLEE--------------QTQLLEL 468 ELR +N+ LE+Q Q L+ S+ L+ QQ EL+++N +L++ Q + Sbjct: 3 ELRQSNQLLEQQTQDLENSEFLLKQQQQELQQSNEELQQLNEELEEKAELLELQNNEVAR 62 Query: 469 QKEDLAKTQVVLVEKATELERANQYKSEFLANMSHELRTPLNSTLILAKLLADNKQGNLS 528 + +++ K + + EKA +L +++YKSEFLANMSHELRTPLNS LILAKLLADN GNLS Sbjct: 63 KNQEIEKARKFIEEKAEQLALSSRYKSEFLANMSHELRTPLNSLLILAKLLADNSSGNLS 122 Query: 529 DEQVRFAQTISSAGNDLLALINDILDLSKMEAGKLDIVSESFVVSKLAEELKASFVVMAQ 588 ++QV ++QTI SAG DLL LINDILDL+K+E+G L + E + L + +K +F +AQ Sbjct: 123 NKQVEYSQTIYSAGTDLLELINDILDLAKIESGTLSVELEPIDFADLHDYIKRTFQQVAQ 182 Query: 589 QKSLGFKVEVEPGVPLRMETDMQRLGQILKNLLSNAIKFTEKGEVSLRISLDAGGR---- 644 K L F +E + +P + +D +RL QILKNLL+NA KFTE+G V+LRI LD Sbjct: 183 DKGLSFSIERDERLPSTILSDPKRLQQILKNLLANAFKFTEQGGVNLRIGLDQINTNHPM 242 Query: 645 IVFAVRDTGIGIGAEQHQFIFEAFRQADGSTHRKYGGTGLGLSISRDLAHLLGGDIEVQS 704 I FA+ DTGIGI E+ Q IFEAF+Q DG+T RKYGGTGLGLSISR+LA +LGG + + S Sbjct: 243 ITFAISDTGIGIPQEKQQIIFEAFQQVDGTTSRKYGGTGLGLSISRELAQMLGGRLGLVS 302 Query: 705 RLGEGSIFTLSLPQVYRPEQAVMRTALPVPAAAAATLQAAQVATAPDVRIPGPQVMPTPQ 764 + G+GS FTL LPQ Y P + Q + P Q+ P Q Sbjct: 303 QPGQGSTFTLYLPQTY-------------PETKTTVISQQQTS-------PPHQMSPVFQ 342 Query: 765 KRLQDIA----IDDDRDRIE 780 + LQ IA I DDR I+ Sbjct: 343 ENLQPIAIANSIADDRGIIQ 362 >alr1121_3 [T] COG0642 Signal transduction histidine kinase Nos Nostoc sp. PCC 7120 Length = 292 Score = 281 bits (720), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 145/247 (58%), Positives = 182/247 (73%), Gaps = 14/247 (5%) Query: 493 YKSEFLANMSHELRTPLNSTLILAKLLADNKQGNLSDEQVRFAQTISSAGNDLLALINDI 552 YKSEFLANMSHELRTPLNS LILAKLL DN NL+ +QV ++QTI SAGN+LLALINDI Sbjct: 1 YKSEFLANMSHELRTPLNSLLILAKLLTDNVDSNLTAKQVEYSQTIYSAGNELLALINDI 60 Query: 553 LDLSKMEAGKLDIVSESFVVSKLAEELKASFVVMAQQKSLGFKVEVEPGVPLRMETDMQR 612 LDL+K+E+G + I + +S+LAE+++ F +AQ K L F VE+ P +P + TD++R Sbjct: 61 LDLAKIESGTMSIHATPIPLSELAEQIERGFGQIAQNKGLTFAVELAPELPTTVNTDIKR 120 Query: 613 LGQILKNLLSNAIKFTEKGEVSLRISLDAGGR-------------IVFAVRDTGIGIGAE 659 L Q+LKNLLSNA KFTE+GEV LRI + G I FAV DTGIGI A+ Sbjct: 121 LQQVLKNLLSNAFKFTERGEVRLRIEVAKPGWNPNQQPLNPAQNVIAFAVSDTGIGIAAD 180 Query: 660 QHQFIFEAFRQADGSTHRKYGGTGLGLSISRDLAHLLGGDIEVQSRLGEGSIFTLSLPQV 719 + + IFEAF+QADG+T RKYGGTGLGLSISR++AHLLGG+I++ S G+GS FT LPQ Sbjct: 181 KQKIIFEAFQQADGTTSRKYGGTGLGLSISREIAHLLGGEIKLTSHPGQGSTFTFYLPQ- 239 Query: 720 YRPEQAV 726 + PE + Sbjct: 240 FSPESTL 246 >mll2385_3 [T] COG0642 Signal transduction histidine kinase Mlo Mesorhizobium loti Length = 354 Score = 265 bits (678), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 160/318 (50%), Positives = 212/318 (66%), Gaps = 18/318 (5%) Query: 438 LKASQLRLETQQAELEETNAQLEEQTQLLELQKEDLAKTQV-------VLVEKATELERA 490 L+A Q L +Q EL TN +L+E+ QLLE +K+ + + L EKA +L Sbjct: 12 LQARQTELTKKQEELHATNEELQEKAQLLENEKKQVENKNLEIEMARRALEEKAEQLALT 71 Query: 491 NQYKSEFLANMSHELRTPLNSTLILAKLLADNKQGNLSDEQVRFAQTISSAGNDLLALIN 550 ++YKSEFLANMSHELRTPLNS LIL+ LLA N+QGNL+++QV FA+TI+SAG DLL+LIN Sbjct: 72 SKYKSEFLANMSHELRTPLNSLLILSNLLAANQQGNLNEKQVEFARTINSAGTDLLSLIN 131 Query: 551 DILDLSKMEAGKLDIVSESFVVSKLAEELKASFVVMAQQKSLGFKVEVEPGVPLRMETDM 610 DILDLSK+E+G + I V+ L + + +F +A K LGF + V+P +P + TD Sbjct: 132 DILDLSKIESGTVSIDINDMPVAHLRQHMDRTFRQLAADKGLGFTINVDPELPETVRTDE 191 Query: 611 QRLGQILKNLLSNAIKFTEKGEVSLRISLDAGGR----------IVFAVRDTGIGIGAEQ 660 +RL QI+ NLLSNA KFT GEV L ++ GR + AV DTGIGI ++ Sbjct: 192 KRLQQIVLNLLSNAFKFTSAGEVRLDFRVEKTGRRNGARQPKRALAIAVTDTGIGIPEDK 251 Query: 661 HQFIFEAFRQADGSTHRKYGGTGLGLSISRDLAHLLGGDIEVQSRLGEGSIFTLSLPQVY 720 + IFEAF+QADG+T RKYGGTGLGLSISR++A LLGG++ V+S G+GS FTL +P + Sbjct: 252 QKLIFEAFQQADGTTSRKYGGTGLGLSISREIARLLGGELRVESTPGKGSTFTLMIP-LD 310 Query: 721 RPEQAVMRTALPVPAAAA 738 P A+ +PAA A Sbjct: 311 GPRVAMTTQPELLPAAEA 328