BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3336.p         (113 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

all0966 [S] COG2268 Uncharacterized protein conserved in bacteri...    30   0.94 
BH0745 [C] COG2851 H+/citrate symporter Bha Bacillus halodurans        28   6.4  

>all0966 [S] COG2268 Uncharacterized protein conserved in bacteria Nos
           Nostoc sp. PCC 7120
          Length = 689

 Score = 30.4 bits (67), Expect = 0.94,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 30/56 (53%)

Query: 48  LDRRCIMPNLIMNNLMFFIPMTLAGLLLCGEVPVASRMVRTSLRAVGAVFGALLAL 103
           +D   ++P +++  L+ F+P+   GL++ GE  V   + + +    G   G L+AL
Sbjct: 71  VDPFVLIPVVLVGGLVIFVPLFFGGLVVIGEREVGVVVRKFTFSGKGLPAGQLIAL 126


>BH0745 [C] COG2851 H+/citrate symporter Bha Bacillus halodurans
          Length = 442

 Score = 27.7 bits (60), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)

Query: 44  KTNKLDRRCIMPNLIMNNLMFFIPMTLAGLLLCGEVP 80
           +T K DR    P L+  NL+  I + L GLL+ GE+P
Sbjct: 228 QTKKKDRSLARPKLLWVNLL--ITLALIGLLVWGEIP 262