BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3322.p (220 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0675 Non COG 255 5e-68 YPO2970 [S] COG4380 Uncharacterized protein conserved in bacteri... 240 2e-63 NMB1162 [S] COG4380 Uncharacterized protein conserved in bacteri... 212 4e-55 NMB1124 [S] COG4380 Uncharacterized protein conserved in bacteri... 212 4e-55 NMA1332 [S] COG4380 Uncharacterized protein conserved in bacteri... 212 4e-55 >RSp0675 Non COG Length = 223 Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 126/223 (56%), Positives = 161/223 (72%), Gaps = 3/223 (1%) Query: 1 MSLSKFKALGALLLVLLASGCATQKKSYDYAEYKAARPASILVLPPMNSSSEVIAPYGML 60 M+ K A+ +V L +GCA K DYA +KA++P SI+VLPP+N S +V A YGML Sbjct: 1 MAKRFLKLFAAIGVVALMAGCAAPAKHVDYAAFKASKPRSIVVLPPLNQSPDVKATYGML 60 Query: 61 AQATLPLAESGYYVIPVSLAAETFKQNGLANAADIHEVPVKKLHEIFGADAALYINITDY 120 +Q T PLAE+GYYV+PV+L ETF+QNGL A DIH VPV KL +IFGADAALY+ IT Y Sbjct: 61 SQVTKPLAEAGYYVLPVALVDETFRQNGLTTAGDIHGVPVAKLKDIFGADAALYVTITQY 120 Query: 121 GTSYKVVQSDTVVAAEAKLIDLRSGKTLWQGSASASSAEQRQNQN---NGLLGMLISAVV 177 GT Y ++ S TVVAA+AKL+DL+SG+TLW G ASASS E + + G++G+L+SA V Sbjct: 121 GTKYMLIDSVTVVAADAKLVDLKSGETLWTGHASASSKETGNSVDVNAGGIIGVLVSAAV 180 Query: 178 NQIISTTTDASYKMAAVTSNRLLRAGGNNGLLYGPRSPQYQKD 220 QI++T D+ Y +A TS RLL AG + GLLYGPRSP+Y D Sbjct: 181 KQIVNTAIDSGYSVAGATSARLLSAGPHGGLLYGPRSPKYGTD 223 >YPO2970 [S] COG4380 Uncharacterized protein conserved in bacteria Ype Yersinia pestis Length = 218 Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 120/213 (56%), Positives = 156/213 (73%), Gaps = 2/213 (0%) Query: 8 ALGALLLVLLASGCATQKKSYDYAEYKAARPASILVLPPMNSSSEVIAPYGMLAQATLPL 67 A+ A+++ LL +GCAT + DY ++K ++P SILVL P N S EV A +G+L+Q T PL Sbjct: 6 AVCAVMMALLLTGCATPVAT-DYTDFKQSKPKSILVLLPQNQSPEVDASHGVLSQVTYPL 64 Query: 68 AESGYYVIPVSLAAETFKQNGLANAADIHEVPVKKLHEIFGADAALYINITDYGTSYKVV 127 AE+GYYV+PV++ ETFKQNG+ NA DI KL +IFGADA LYI I YGTSY+V+ Sbjct: 65 AEAGYYVLPVAVVEETFKQNGMTNAGDISAASPAKLRQIFGADAVLYITIVQYGTSYQVI 124 Query: 128 QSDTVVAAEAKLIDLRSGKTLWQGSASASSAEQRQNQNNGLLGMLISAVVNQIISTTTDA 187 SDT V A AKL+DL++GK LW GSA+ASS E N + G++G+L+ A V+QI +T TD Sbjct: 125 TSDTRVTANAKLVDLKTGKLLWSGSATASSNEGN-NSSGGVIGLLVQAAVSQIANTITDK 183 Query: 188 SYKMAAVTSNRLLRAGGNNGLLYGPRSPQYQKD 220 S+ +A +TS R+L AG NGLLYGPRSPQY KD Sbjct: 184 SHDVAGITSARMLSAGTPNGLLYGPRSPQYGKD 216 >NMB1162 [S] COG4380 Uncharacterized protein conserved in bacteria Nme Neisseria meningitidis MC58 Length = 215 Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 107/208 (51%), Positives = 143/208 (68%), Gaps = 3/208 (1%) Query: 12 LLLVLLASGCATQK-KSYDYAEYKAARPASILVLPPMNSSSEVIAPYGMLAQATLPLAES 70 L VL S C QK +DY +K ++PASILV+PP+N S +V +G+LA PL+E+ Sbjct: 8 LAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDVNGTWGVLASTAAPLSEA 67 Query: 71 GYYVIPVSLAAETFKQNGLANAADIHEVPVKKLHEIFGADAALYINITDYGTSYKVVQSD 130 GYYV P ++ ETFKQNGL NAADIH V +KLH+IFG DA LYI +T+YGTSY+++ S Sbjct: 68 GYYVFPAAVVEETFKQNGLTNAADIHAVRPEKLHQIFGNDAVLYITVTEYGTSYQILDSV 127 Query: 131 TVVAAEAKLIDLRSGKTLWQGSASASSAEQRQNQNNGLLGMLISAVVNQIISTTTDASYK 190 T V+A+A+L+D R+GK LW GSAS E N N+GLLG L+SAVVNQI ++ TD Y+ Sbjct: 128 TTVSAKARLVDSRNGKELWSGSASIR--EGSNNSNSGLLGALVSAVVNQIANSLTDRGYQ 185 Query: 191 MAAVTSNRLLRAGGNNGLLYGPRSPQYQ 218 ++ + LL +NG+L GPR + Q Sbjct: 186 VSKTAAYNLLSPYSHNGILKGPRFVEEQ 213 >NMB1124 [S] COG4380 Uncharacterized protein conserved in bacteria Nme Neisseria meningitidis MC58 Length = 215 Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 107/208 (51%), Positives = 143/208 (68%), Gaps = 3/208 (1%) Query: 12 LLLVLLASGCATQK-KSYDYAEYKAARPASILVLPPMNSSSEVIAPYGMLAQATLPLAES 70 L VL S C QK +DY +K ++PASILV+PP+N S +V +G+LA PL+E+ Sbjct: 8 LAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDVNGTWGVLASTAAPLSEA 67 Query: 71 GYYVIPVSLAAETFKQNGLANAADIHEVPVKKLHEIFGADAALYINITDYGTSYKVVQSD 130 GYYV P ++ ETFKQNGL NAADIH V +KLH+IFG DA LYI +T+YGTSY+++ S Sbjct: 68 GYYVFPAAVVEETFKQNGLTNAADIHAVRPEKLHQIFGNDAVLYITVTEYGTSYQILDSV 127 Query: 131 TVVAAEAKLIDLRSGKTLWQGSASASSAEQRQNQNNGLLGMLISAVVNQIISTTTDASYK 190 T V+A+A+L+D R+GK LW GSAS E N N+GLLG L+SAVVNQI ++ TD Y+ Sbjct: 128 TTVSAKARLVDSRNGKELWSGSASIR--EGSNNSNSGLLGALVSAVVNQIANSLTDRGYQ 185 Query: 191 MAAVTSNRLLRAGGNNGLLYGPRSPQYQ 218 ++ + LL +NG+L GPR + Q Sbjct: 186 VSKTAAYNLLSPYSHNGILKGPRFVEEQ 213 >NMA1332 [S] COG4380 Uncharacterized protein conserved in bacteria NmA Neisseria meningitidis Z2491 Length = 215 Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 107/208 (51%), Positives = 143/208 (68%), Gaps = 3/208 (1%) Query: 12 LLLVLLASGCATQK-KSYDYAEYKAARPASILVLPPMNSSSEVIAPYGMLAQATLPLAES 70 L VL S C QK +DY +K ++PASILV+PP+N S +V +G+LA PL+E+ Sbjct: 8 LAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPLNESPDVNGTWGVLASTAAPLSEA 67 Query: 71 GYYVIPVSLAAETFKQNGLANAADIHEVPVKKLHEIFGADAALYINITDYGTSYKVVQSD 130 GYYV P ++ ETFKQNGL NAADIH V +KLH+IFG DA LYI +T+YGTSY+++ S Sbjct: 68 GYYVFPAAVVEETFKQNGLTNAADIHAVRPEKLHQIFGNDAVLYITVTEYGTSYQILDSV 127 Query: 131 TVVAAEAKLIDLRSGKTLWQGSASASSAEQRQNQNNGLLGMLISAVVNQIISTTTDASYK 190 T V+A+A+L+D R+GK LW GSAS E N N+GLLG L+SAVVNQI ++ TD Y+ Sbjct: 128 TTVSAKARLVDSRNGKELWSGSASIR--EGSNNSNSGLLGALVSAVVNQIANSLTDRGYQ 185 Query: 191 MAAVTSNRLLRAGGNNGLLYGPRSPQYQ 218 ++ + LL +NG+L GPR + Q Sbjct: 186 VSKTAAYNLLSPYSHNGILKGPRFVEEQ 213