BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3320.p (222 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA0045 [M] COG1462 Uncharacterized protein involved in formation... 347 9e-96 YPO2972 [M] COG1462 Uncharacterized protein involved in formatio... 333 2e-91 RSp0673 [M] COG1462 Uncharacterized protein involved in formatio... 328 7e-90 NMB1164 [M] COG1462 Uncharacterized protein involved in formatio... 306 2e-83 NMB1126 [M] COG1462 Uncharacterized protein involved in formatio... 306 2e-83 >PA0045 [M] COG1462 Uncharacterized protein involved in formation of curli polymers Pae Pseudomonas aeruginosa Length = 228 Score = 347 bits (891), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 165/212 (77%), Positives = 186/212 (87%) Query: 11 AVAMVTALAGCATENSRSLPVAQVASAQQAYQGPRSPIAVGKFDNRSSYLRGIFNDGVDR 70 AVA + LAGCATE S +LPV QV S + Y G RSPIAVGKFDNRSSY+RGIF+DGVDR Sbjct: 14 AVATLAGLAGCATETSTALPVQQVESVNRPYSGVRSPIAVGKFDNRSSYMRGIFSDGVDR 73 Query: 71 LGGQAKTILITHLQQSNRFSVMDRDNMGELAQEAKLNKQTQALKGANYVVTGDVTEFGRK 130 LGGQAKTILITHLQQ+NRF+V+DRDNM E+ QEA + Q Q LKGA+YVVTGDVTEFGRK Sbjct: 74 LGGQAKTILITHLQQTNRFNVLDRDNMSEIQQEAAIKGQAQRLKGADYVVTGDVTEFGRK 133 Query: 131 ETGDRQLFGILGRGKSQVAYAKVSLNIVDVNTSQVVYSAQGAGEYSLGNREIIGFGGTAS 190 E GDRQLFGILGRGKSQ+AYAKV+LNIV+++TS+VVYS QGAGEY+L NRE+IGFGGTAS Sbjct: 134 EVGDRQLFGILGRGKSQIAYAKVALNIVNISTSEVVYSTQGAGEYALSNREVIGFGGTAS 193 Query: 191 YDSTLNGKVLDLAIREAVQNLVTGIDSGAWKP 222 YDSTLNGKVLDLA+REAV LV +DSGAWKP Sbjct: 194 YDSTLNGKVLDLAMREAVNKLVNAVDSGAWKP 225 >YPO2972 [M] COG1462 Uncharacterized protein involved in formation of curli polymers Ype Yersinia pestis Length = 223 Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 158/205 (77%), Positives = 184/205 (89%) Query: 18 LAGCATENSRSLPVAQVASAQQAYQGPRSPIAVGKFDNRSSYLRGIFNDGVDRLGGQAKT 77 L+GCATE+SRSL VA+VAS Y GPRSPI+VGKFDNRSSY+ G+F+DGVDRLG Q+KT Sbjct: 17 LSGCATESSRSLEVAKVASYGTQYNGPRSPISVGKFDNRSSYMSGLFSDGVDRLGNQSKT 76 Query: 78 ILITHLQQSNRFSVMDRDNMGELAQEAKLNKQTQALKGANYVVTGDVTEFGRKETGDRQL 137 IL+THLQQ+ RF+V++R NM EL EA ++ ++Q LKGA YVVTGDVTEFGRKETGDRQL Sbjct: 77 ILVTHLQQTGRFNVLERTNMEELKNEAAISGKSQRLKGATYVVTGDVTEFGRKETGDRQL 136 Query: 138 FGILGRGKSQVAYAKVSLNIVDVNTSQVVYSAQGAGEYSLGNREIIGFGGTASYDSTLNG 197 +GILGRGKSQVAYAKV+LNIV+VNTS+VV+S+QGAGEY L NRE+IGFGGTASYDSTLNG Sbjct: 137 WGILGRGKSQVAYAKVNLNIVNVNTSEVVFSSQGAGEYELSNREVIGFGGTASYDSTLNG 196 Query: 198 KVLDLAIREAVQNLVTGIDSGAWKP 222 KVLDLAIREAV NLV GI+SGAW+P Sbjct: 197 KVLDLAIREAVNNLVAGIESGAWQP 221 >RSp0673 [M] COG1462 Uncharacterized protein involved in formation of curli polymers Rso Ralstonia solanacearum Length = 227 Score = 328 bits (840), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 159/221 (71%), Positives = 188/221 (85%) Query: 2 FSRYVTAVAAVAMVTALAGCATENSRSLPVAQVASAQQAYQGPRSPIAVGKFDNRSSYLR 61 FS+ A AAVA + L GCATE S++LPV +V SA + Y G R+PIAVGKFDNRS+Y+R Sbjct: 4 FSKVAVAGAAVAALGMLGGCATETSQALPVQKVESASRPYAGVRTPIAVGKFDNRSAYMR 63 Query: 62 GIFNDGVDRLGGQAKTILITHLQQSNRFSVMDRDNMGELAQEAKLNKQTQALKGANYVVT 121 G+F+DGVDRLGGQAKTILITHLQQ+NRF+V+DRDNM E+ +EA L Q LKGA+YV+T Sbjct: 64 GVFSDGVDRLGGQAKTILITHLQQTNRFNVLDRDNMVEIKREATLKNTAQKLKGADYVIT 123 Query: 122 GDVTEFGRKETGDRQLFGILGRGKSQVAYAKVSLNIVDVNTSQVVYSAQGAGEYSLGNRE 181 GDVTEFGRKE GD+QLFGILGRG+ Q+AYAKVSLN+V++ TS+VVYSA GAGEY L NRE Sbjct: 124 GDVTEFGRKEVGDQQLFGILGRGREQIAYAKVSLNVVNIATSEVVYSAGGAGEYKLSNRE 183 Query: 182 IIGFGGTASYDSTLNGKVLDLAIREAVQNLVTGIDSGAWKP 222 ++GFGGTASYDSTLNGKVLDLA+REAV LV I+SGAWKP Sbjct: 184 VVGFGGTASYDSTLNGKVLDLAMREAVTTLVNAIESGAWKP 224 >NMB1164 [M] COG1462 Uncharacterized protein involved in formation of curli polymers Nme Neisseria meningitidis MC58 Length = 223 Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 143/203 (70%), Positives = 175/203 (86%) Query: 20 GCATENSRSLPVAQVASAQQAYQGPRSPIAVGKFDNRSSYLRGIFNDGVDRLGGQAKTIL 79 GCATE+SRSL V +VAS Y G R+PI+VG FDNRSS+ +GIF+DG DRLG QAKTIL Sbjct: 19 GCATESSRSLEVEKVASYNTQYHGVRTPISVGTFDNRSSFQKGIFSDGEDRLGSQAKTIL 78 Query: 80 ITHLQQSNRFSVMDRDNMGELAQEAKLNKQTQALKGANYVVTGDVTEFGRKETGDRQLFG 139 +THLQQ+NRF+V++R N+ L QE+ ++ + LKGA+YVVTGDVTEFGR++ GD QLFG Sbjct: 79 VTHLQQTNRFNVLNRTNLNALKQESGISGKAHNLKGADYVVTGDVTEFGRRDVGDHQLFG 138 Query: 140 ILGRGKSQVAYAKVSLNIVDVNTSQVVYSAQGAGEYSLGNREIIGFGGTASYDSTLNGKV 199 ILGRGKSQ+AYAKV+LNIV+VNTS++VYSAQGAGEY+L NREIIGFGGT+ YD+TLNGKV Sbjct: 139 ILGRGKSQIAYAKVALNIVNVNTSEIVYSAQGAGEYALSNREIIGFGGTSGYDATLNGKV 198 Query: 200 LDLAIREAVQNLVTGIDSGAWKP 222 LDLAIREAV +LV +D+GAW+P Sbjct: 199 LDLAIREAVNSLVQAVDNGAWQP 221 >NMB1126 [M] COG1462 Uncharacterized protein involved in formation of curli polymers Nme Neisseria meningitidis MC58 Length = 223 Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 143/203 (70%), Positives = 175/203 (86%) Query: 20 GCATENSRSLPVAQVASAQQAYQGPRSPIAVGKFDNRSSYLRGIFNDGVDRLGGQAKTIL 79 GCATE+SRSL V +VAS Y G R+PI+VG FDNRSS+ +GIF+DG DRLG QAKTIL Sbjct: 19 GCATESSRSLEVEKVASYNTQYHGVRTPISVGTFDNRSSFQKGIFSDGEDRLGSQAKTIL 78 Query: 80 ITHLQQSNRFSVMDRDNMGELAQEAKLNKQTQALKGANYVVTGDVTEFGRKETGDRQLFG 139 +THLQQ+NRF+V++R N+ L QE+ ++ + LKGA+YVVTGDVTEFGR++ GD QLFG Sbjct: 79 VTHLQQTNRFNVLNRTNLNALKQESGISGKAHNLKGADYVVTGDVTEFGRRDVGDHQLFG 138 Query: 140 ILGRGKSQVAYAKVSLNIVDVNTSQVVYSAQGAGEYSLGNREIIGFGGTASYDSTLNGKV 199 ILGRGKSQ+AYAKV+LNIV+VNTS++VYSAQGAGEY+L NREIIGFGGT+ YD+TLNGKV Sbjct: 139 ILGRGKSQIAYAKVALNIVNVNTSEIVYSAQGAGEYALSNREIIGFGGTSGYDATLNGKV 198 Query: 200 LDLAIREAVQNLVTGIDSGAWKP 222 LDLAIREAV +LV +D+GAW+P Sbjct: 199 LDLAIREAVNSLVQAVDNGAWQP 221