BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3274.p (1037 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0750_1 [S] COG3501 Uncharacterized protein conserved in bacte... 548 e-155 RSp0738_1 [S] COG3501 Uncharacterized protein conserved in bacte... 279 3e-74 RSp0175_1 [S] COG3501 Uncharacterized protein conserved in bacte... 207 8e-53 PA0095 [S] COG3501 Uncharacterized protein conserved in bacteria... 196 2e-49 RSp0518_1 [S] COG3501 Uncharacterized protein conserved in bacte... 190 2e-47 >RSp0750_1 [S] COG3501 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 600 Score = 548 bits (1412), Expect = e-155, Method: Compositional matrix adjust. Identities = 316/627 (50%), Positives = 400/627 (63%), Gaps = 38/627 (6%) Query: 2 PTLPASLL-GAWHQSSRVMRLFMSPDSDAGLDGLMAEKLQAVETISPLLEGGDIDEAIAG 60 PT A+LL A+ Q++R++RL D+ G + L+ E+L E + G Sbjct: 4 PTELANLLRAAFTQANRLLRL----DTPLGPNALLPERLDVAEHLDD-----------GG 48 Query: 61 YRLQLSCLSLDAHLSLRKLIGQPV---LLVLQTDGAARHFHGHITQSTLQGANGGMARYL 117 +RL+L+ LS DA L +L+GQPV LL Q+ GA R FHGH+T+ GANGG+ RY Sbjct: 49 FRLELTALSDDADLDPARLLGQPVRLDLLTQQSRGALRPFHGHVTRFEQLGANGGLVRYR 108 Query: 118 LTIEPWLSFLRHRRDSAVYQDMTVPEVIEAVLRDYQGQGKLQPQWRLDLQDSSVYARRSL 177 L IEPWL+FLRHRRDS ++QD +V EVI+++ DY GQG+L P WR L+D+SVY RRS+ Sbjct: 109 LVIEPWLAFLRHRRDSFLFQDQSVIEVIDSLFGDYNGQGRLAPAWRWSLRDASVYTRRSV 168 Query: 178 VTQYQESDLAFISRLLAEEGMFYYIEHQGHSNSPSLGAHTMVIADHNGSFKDNARASVAF 237 +TQY+ESD F++RLLAEEG+FY+ EH+ +LG H MVIAD N F DNA+A++ F Sbjct: 169 ITQYEESDFDFVTRLLAEEGLFYFFEHEA-VEGDALGVHRMVIADANDVFTDNAQAAIRF 227 Query: 238 SQSSAVMAQDSIDRWRSVRRWQTNAVEILTWDYRQAAVREA-TSATAADSGAPALALVSR 296 ++ A +D IDRW+ VRRWQTNAV I +WDYR R A A G P L L Sbjct: 228 GRADATANEDVIDRWQGVRRWQTNAVSIASWDYRANTQRSAQLGAQQWRDGIPQLTLQDT 287 Query: 297 DAPGLYANENRVQAERQAKLQMQAIEVRNKIFTGAGTVRSFVPGTTFTLSGHADHVGGDN 356 D PG Y E+ QA+R A+L M+A+E+R+K F G G+VR+ GT F L H +H Sbjct: 288 DYPGQYWFEDSAQAQRSARLVMEALELRDKQFDGEGSVRTLALGTRFQLVDHYEHGDDGE 347 Query: 357 DRFVLLRVVHQAHNNLNADLKSEVMTLLGQAVLADEDDQGSLLDAALNPAPGEARPVYRN 416 RF +L V+H+A NN N + LG L+ D Q DAA N G YRN Sbjct: 348 ARFAVLSVLHRARNNFNERFGQVLTQALG--ALSGADAQ----DAAGN--AGTDATFYRN 399 Query: 417 RFEAIRDKIPYRPLLTAADGQALYAKPTVTGQQTAVVVGAQGQAVHTDRDNRVRVQFHWQ 476 F + D +PYRP A G+AL+ +PTV G QTA+VVG G VHTDRD+R++VQFHWQ Sbjct: 400 HFTVVHDTVPYRPQQRDAQGRALHPRPTVEGSQTALVVGT-GGPVHTDRDHRIKVQFHWQ 458 Query: 477 RGERSHSGLSSPAPDDHSGAPANEASGTWVRVLAGLAPTAGANWGGQAVPRIGQEVLIDF 536 RG RS S PA DD++ A A G WVRV AP AG NWGG A+PR+GQEVL++F Sbjct: 459 RGARSASRQPHPAGDDNARAEA--GLGCWVRV---AAPVAGPNWGGVALPRVGQEVLVEF 513 Query: 537 IEGDIDRPVVIGTLYNGKGLANAQGNQAGQGAGAATGNAPAWFPGDSD---AHHHAAVLS 593 ++GDIDRPVV+G YNG G +AQ NQ GA ATGNAPAWF GDS A+ H AVLS Sbjct: 514 VQGDIDRPVVVGAAYNGSGQRDAQYNQNQAGAAGATGNAPAWFAGDSKSQGAYAHNAVLS 573 Query: 594 GIKTQAMSASQGGAGAYQQLVFDDTPG 620 GIKTQA++ SQ GA Y QLVFDDT G Sbjct: 574 GIKTQALAGSQTGASGYSQLVFDDTEG 600 >RSp0738_1 [S] COG3501 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 609 Score = 279 bits (713), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 233/668 (34%), Positives = 315/668 (47%), Gaps = 105/668 (15%) Query: 32 DGLMAEKLQAVETISPLLEGGDIDEAIAGYRLQLSCLSLDAHLSLRKLIGQPVLLVLQ-T 90 D L+ E+ A E +S A LQ+ CLS A+L +L Q L L Sbjct: 36 DNLVVERFTAREAVS------------ASCVLQVDCLSPLANLDTAQLASQEATLRLMLA 83 Query: 91 DGAARHFHGHITQSTLQGANGGMARYLLTIEPWLSFLRHRRDSAVYQDMTVPEVIEAVLR 150 DG+ R +HG++T G NGG+ARY L I PWL L RRD VYQD T E+IE + Sbjct: 84 DGSRRAWHGYVTDCAALGGNGGLARYRLRIGPWLDRLHTRRDCFVYQDKTALEIIEDLFA 143 Query: 151 DYQGQGKLQPQWRLDLQDSSVYARRSLVTQYQESDLAFISRLLAEEGMFYYIEHQ---GH 207 DY P L S A+RS+ QY+E+D F+ RLLAEEG+ IEH+ Sbjct: 144 DY-------PVAHYKLAVSQPCAKRSICCQYRETDYDFVMRLLAEEGLSLRIEHEQGDAR 196 Query: 208 SNSPSLGAHTMVIADHNGSFKDNARASVAFSQSSAVMAQDSIDRWRSVRRWQTNAVEILT 267 + + H +VI D++ A+ + F + A +D+I+R+ +R TNAV + + Sbjct: 197 RDGSAQSRHCVVIFDNDAERPACAQPDIRFHRVDATEREDAIERFSQMRTVGTNAVTVSS 256 Query: 268 WDYRQAAVREATSATAADSGAPALALVSRDAPGLYANENRVQAERQAKLQMQAIEVRNKI 327 W+Y+ A A A+A+D G AL + +A G Y + A R A+L+MQA E Sbjct: 257 WNYKALAA-TAAQASASDPGGELPALEAFEAAGPYRFADAQGAGRAARLRMQAHEGAYLR 315 Query: 328 FTGAGTVRSFVPGTTFTLSGHADHVGGDNDRFVLLRVVHQAHNNLNADLKSEVMTLLGQA 387 + G G+VR PG FTL+ H D + +FV L V H+A NNL ADL LLG Sbjct: 316 YLGQGSVRQLGPGQRFTLTQHFD---TRHSQFVTLSVEHEAANNLGADLAR----LLGTT 368 Query: 388 VLADEDDQGSLLDAALNPAPGEARPVYRNRFEAIRDKIPYRPLLTAADGQALYAKPTVTG 447 + + G YRNRF A+ + P P +PT Sbjct: 369 DI----ESGR----------------YRNRFVAVPAEAPIVP--------PYRHRPTAPE 400 Query: 448 QQTAVVVGAQGQAVHTDRDNRVRVQFHWQRGERSHSGLSSPAPDDHSGAPANEASGTWVR 507 Q A V+ G + TDRD+RVR++F W R + + + PA D S A WVR Sbjct: 401 GQAATVIADDGAPLTTDRDHRVRIRFPWLRAP-ALNAFAEPAGSDRSQVTA------WVR 453 Query: 508 VLAGLAPTAGANWGGQAVPRIGQEVLIDFIEGDIDRPVVIGTLYNGKGLANAQGNQAGQG 567 V +AG NWG +PR G +VL+ F++GDIDRP+V L+N + Sbjct: 454 VATA---SAGPNWGAHHLPRAGTQVLLTFVDGDIDRPLVTMQLHNEQ------------- 497 Query: 568 AGAATGNAPAWFPGDSDAHHHAAVLSGIKTQAMSASQGGAGAYQQLVFDDTPGQSRASLQ 627 +A W D+ LSG S S GG G Y Q V DD P Q R L Sbjct: 498 ------DALPWPAADAPL---GQALSGWH----SPSLGGDG-YNQWVVDDHPAQLRMRLA 543 Query: 628 QHTDAHDGASELNLGALRQQ--TDNQRLAATGQGFELKTRYSAAVRAGQGLLVSTE---K 682 T S+LNLG + T +R G G EL+T A VRAG GLL+ST + Sbjct: 544 SST----AGSQLNLGYVVSHGPTGGERGDWRGTGAELRTDAWAVVRAGGGLLLSTTARAQ 599 Query: 683 SSGAQLDV 690 + G LD+ Sbjct: 600 AGGTLLDM 607 >RSp0175_1 [S] COG3501 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 649 Score = 207 bits (528), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 200/650 (30%), Positives = 294/650 (45%), Gaps = 113/650 (17%) Query: 61 YRLQLSCLSLDAHLSLRKLIGQPVLLVLQ-TDGAARHFHGHITQSTLQGANGGMARYLLT 119 + ++ S +A +L IGQ V LV DG G I Q+ GA+G +ARY LT Sbjct: 44 FEWRVVAASANARFALESFIGQRVTLVTTLADGTQARRTGLIRQAEQLGADGSLARYRLT 103 Query: 120 IEPWLSFLRHRRDSAVYQDMTVPEVIEAVLRDYQGQGKLQPQWRL--DLQDS-SVYARRS 176 + PW +R S V+Q+ + +++E VL Y WR +D + + RS Sbjct: 104 VVPWFWLATQQRHSQVFQNRPLADILEQVLSPYAPYAA----WRFAAGAEDRMAAFGTRS 159 Query: 177 LVTQYQESDLAFISRLLAEEGM-FYYIEHQGHSNSPSLGAHTMVIADHNGSFKDNARAS- 234 + Q++E+D F++RLLAE G+ F +E + +PS G ++ AD +D A A+ Sbjct: 160 HIAQFRETDYRFVTRLLAEAGLGFTTVEDE---QAPS-GHALLIFADSPRLAEDTASAAE 215 Query: 235 --VAFSQSSAVMAQDSIDRWRSVRRWQTNAVEILTWD--YRQAAVREATSATAADSGAP- 289 + + ++ + +D+I R V + WD ++A S +G+P Sbjct: 216 GGIRYHRAHSQEERDAIQALICHSRTAVGGVAVAAWDAQAKRAFRAHVPSRFCGIAGSPD 275 Query: 290 -ALALVSRDAPGLYANENRVQAERQAKLQMQAIEVRNKIFTGAGTVRSFVPGTTFTLSGH 348 L++ AP + A+R A+ M+++E R ++F G G+VR+ GT + Sbjct: 276 AYLSISPSLAP------DTANAQRIAEQVMESVEARARLFIGRGSVRTLRSGTRLKIV-D 328 Query: 349 ADHVGGDND---RFVLLRVVHQAHNNLNADLKSEVMTLLGQAVLADEDDQGSLLDAALNP 405 H+ D D ++ V H NNL AD ++ + LG A D + Sbjct: 329 CPHLPKDVDGPYPLLIDLVEHCGINNLTADTQATLARKLGGLDAALTFDTPPSPPESGPG 388 Query: 406 APGEARPV--------------------YRNRFEAIRDKIPYRPLLTAADGQALYAKPTV 445 G P Y +F A + P+RP+++ D LYA+PT Sbjct: 389 PFGFMAPHEVIERFTPTADLLTAARAHGYAGQFRAGDARRPWRPVVSHPDTGRLYAEPTA 448 Query: 446 TGQQTAVVVGAQGQAV-------HTDRDNRVRVQFHWQRGERSHSGLSSPAPDDHSGAPA 498 G Q+A+VVG G+ HT +VRV+F WQ+GER PDD S Sbjct: 449 RGVQSAIVVGPNGETEASGDAEHHTTPRGQVRVRFPWQQGER---------PDDRSTG-- 497 Query: 499 NEASGTWVRVLAGLAPTAGANWGGQAVPRIGQEVLIDFIEGDIDRPVVIGTLYNGK---G 555 W+ V AGA G Q +PRIGQEVL+ F E DID+PVVIG LYNG+ G Sbjct: 498 ------WLLV---AQRQAGAGMGWQWLPRIGQEVLVKFQEDDIDQPVVIGALYNGQGEAG 548 Query: 556 LANAQGNQAGQGA----------------------GAATGNAPAW--FPGDSDAHHHAAV 591 +A G Q +G A G++PAW +++ H +AA Sbjct: 549 IAPTPGGQVAKGVRQEADPETLYRLGSDSAASAQGNLAAGHSPAWHGLGTEAEGHRNAAA 608 Query: 592 LSGIKTQAMSASQGGAGAYQQLVFDDTPGQSRASLQQHTDAHDGASELNL 641 LSG K SA GG GA LVFDD+ GQ R L T A+ S+LNL Sbjct: 609 LSGFK----SAEHGGRGA-NLLVFDDSDGQLRTQLAT-TQAY---SQLNL 649 >PA0095 [S] COG3501 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 741 Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 163/580 (28%), Positives = 255/580 (43%), Gaps = 113/580 (19%) Query: 14 QSSRVMRLFMSPDSDAGLDGLMAEKLQAVETISPLLEGGDIDEAIAGYRLQLSCLSLDAH 73 Q +R++R+ DS G + L ++++ E + Y L+L +S + Sbjct: 5 QQTRLVRV----DSPLGAEVLQLQRMEGREELGRPF----------AYELEL--ISENPD 48 Query: 74 LSLRKLIGQPVLLVLQT-DGAARHFHGHITQSTLQGANGGMARYLLTIEPWLSFLRHRRD 132 L L L+G+P L L+ DG+ RHFHG + + NG A Y +T+ PWL L D Sbjct: 49 LPLDGLLGKPASLALELHDGSRRHFHGIVAACSQGSGNGQFASYQVTLRPWLWLLTRTSD 108 Query: 133 SAVYQDMTVPEVIEAVLRDYQGQGKLQPQWRLDLQD--SSVYARRSLVTQYQESDLAFIS 190 ++Q+ VP++I+ V RD D +D S Y QY+E+ F+S Sbjct: 109 CRIFQNQKVPDIIKQVFRDLGFS---------DFEDALSRSYREWEYCVQYRETSFDFVS 159 Query: 191 RLLAEEGMFYYIEHQGHSNSPSLGAHTMVIADHNGSFKD--NARASVAFSQSSAVMAQDS 248 RL+ +EG++Y+ H+ H +V++D G+ + N + + + +D Sbjct: 160 RLMEQEGIYYWFRHE-------QSRHILVLSDAYGAHQSPPNYASVPYYPPTLEQRERDH 212 Query: 249 IDRWRSVRRWQTNAVEILTWDYRQAAVREATSATAADSGAPALALVSRDAPGLYANENRV 308 W R Q+ ++ + +D+++ R + A S A A + D PG Y Sbjct: 213 FYDWHMAREVQSGSLSLNDYDFQRPGARLEVRSNIARSHAAADYPLY-DYPGEYVQSQ-- 269 Query: 309 QAERQAKLQMQAIEVRNKIFTGAGTVRSFVPGTTFTLSGHADHVGGDNDRFVLL-----R 363 E+ A+ +++A++ R + G R G F LSG+ D +R L+ R Sbjct: 270 DGEQYARTRIEALQARYERVRLRGRARGLGSGHLFKLSGYPRE---DQNREYLVVGAEYR 326 Query: 364 VVHQAHNNLNADLKSEVMTLLGQAVLADEDDQGSLLDAALNPAPGEARPVYRNRFEAIRD 423 VV E+ G V A + + +DA G+A Sbjct: 327 VVQ------------ELYETGGGGVGAQFESELDCIDA------GQA------------- 355 Query: 424 KIPYRPLLTAADGQALYAKPTVTGQQTAVVVGAQGQAVHTDRDNRVRVQFHWQRGERSHS 483 YRPL T P V G QTAVVVG +G+ + TD+ RV+V FHW R ++S Sbjct: 356 ---YRPLPTT-------PLPIVRGPQTAVVVGPKGEEIWTDQYGRVKVHFHWDRHDQS-- 403 Query: 484 GLSSPAPDDHSGAPANEASGTWVRVLAGLAPTAGANWGGQAVPRIGQEVLIDFIEGDIDR 543 NE S W+RV AG NWG +PRIGQEV++ F+EGD DR Sbjct: 404 ---------------NENSSCWIRVSQAW---AGKNWGSMQIPRIGQEVIVSFLEGDPDR 445 Query: 544 PVVIGTLYNGKGLA----NAQGNQAGQGAGAATGNAPAWF 579 P++ G +YN + A Q+G + ++ G PA F Sbjct: 446 PIITGRVYNAEQTVPYELPANATQSGMKSRSSKGGTPANF 485 >RSp0518_1 [S] COG3501 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 586 Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 197/647 (30%), Positives = 274/647 (42%), Gaps = 105/647 (16%) Query: 4 LPASLLGAWHQSSRVMRLFMSPDSDAGLDGLMAEKLQAVETISPLLEGGDIDEAI-AGYR 62 LP +L Q+ R MRL P + A A +T+ P + DI + I AG Sbjct: 10 LPCALA----QNRRAMRLDFGPAATA-----------AAQTLVP--QYADIHQGICAGLE 52 Query: 63 LQLSCLSLDAHLSLRKLIGQPVLLVLQTDGAARHFHGHITQSTLQGA-NGGMARYLLTIE 121 Q+ CLS A LS +L+G PV + + TDG A H I GA +G +A Y LTI Sbjct: 53 AQVVCLSERADLSRDELLGLPVSIQVATDGGALHAINGIVSDVHSGAFDGTLASYRLTII 112 Query: 122 PWLSFLRHRRDSAVYQDMTVPEVIEAVLRDYQGQGKLQPQ-WRLDLQ-DSSVYARRSLVT 179 +S +R RR+ ++ +VP+++ +L ++Q + + Q +R L D S Y R+ Sbjct: 113 DAMSLMRRRRNMRIFVGKSVPDILGILLAEWQQRSAILGQAFRFQLLLDRSGYPVRAQTL 172 Query: 180 QYQESDLAFISRLLAEEGMFYYI----EHQGHSNSPSLGAHTMVIADHNGSFKDNARASV 235 Q ESD F+ RL EGMF ++ ++P A T+V D +V Sbjct: 173 QLDESDSGFLDRLTRREGMFCFVVAGTPDGSDGDTP---AQTLVFCDDPMKLPQAQAGAV 229 Query: 236 AFSQSSAVMAQDSIDRWRSVRRWQTNAVEILTWDYRQAAVREATSATAADSGAPA--LAL 293 F +AV A+DS+ RW + + + DY V T D G LA Sbjct: 230 PFHYGAAVKARDSVTRWGEAHSLVSGTIRGTSPDYETGRVDRVDVDTLLDLGKAGNDLAR 289 Query: 294 VSRDAP--GLYANENRVQAERQAKLQMQAIEVRNKIFTGAGTVRSFVPGTTFTLSGH--A 349 + DA +A ++R ERQ +L+MQA E R A VR+ PG+ F LSGH Sbjct: 290 LMTDAAVDRAHAGDSRADYERQGRLRMQAHERRAAYVHAASDVRNLTPGSWFVLSGHPLV 349 Query: 350 DHVGGDNDRFVLLRVVHQAHNNLNADLKSEVMTLLGQAVLADEDDQGSLLDAALNPAPGE 409 D + FV+ R+ + NN L + L + S + P + Sbjct: 350 DKREPEQREFVVTRLRQRIANNFPKALNEQARALA----------EASGWHLEVRPGRDD 399 Query: 410 ARPVYRNRFEAIRDKIPYRPLLTAADGQALYAKPTVTGQQTAVVVGAQGQAVHTDRDNRV 469 A+ Y N F + P P D P T TAVVVG GQ VH D R Sbjct: 400 AQIRYENTFTCVPRGAPLTP-----DYDPRIDLPR-TDPMTAVVVGPNGQEVHCDELGRY 453 Query: 470 RVQFHWQRGERSHSGLSSPAPDDHSGAPANEASGT-----WVRVLAGLAPTAGANWGGQA 524 ++QF GL + +DH+ A SGT WVR AG W GQ Sbjct: 454 KLQF---------VGLYA---EDHAHAQGAGTSGTERDSAWVR--------AGNLWAGQR 493 Query: 525 ----VP-RIGQEVLIDFIEGDIDRPVVIGTLYNGKGLANAQGNQAGQGAGAATGNAPAWF 579 +P R G EVL+ F GD DRP + L + A + TG P Sbjct: 494 YGINLPLRAGMEVLVAFANGDPDRPYIATVLPGHNNMPTAFND---------TGALP--- 541 Query: 580 PGDSDAHHHAAVLSGIKTQAMSASQGGAGAYQQLVFDDTPGQSRASL 626 D H LSGIKT+ + S + Q+ FDDTPG+ + L Sbjct: 542 ----DNKH----LSGIKTKEVDGS-----GFNQVAFDDTPGEISSQL 575