BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3164.p (285 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA1547 [S] COG2836 Uncharacterized conserved protein Pae Pseudom... 140 3e-33 VC1435 [S] COG2836 Uncharacterized conserved protein Vch Vibrio ... 140 5e-33 NMB0759 [S] COG2836 Uncharacterized conserved protein Nme Neisse... 92 2e-18 NMA0970 [S] COG2836 Uncharacterized conserved protein NmA Neisse... 91 2e-18 RSc1284 [S] COG2836 Uncharacterized conserved protein Rso Ralsto... 85 2e-16 >PA1547 [S] COG2836 Uncharacterized conserved protein Pae Pseudomonas aeruginosa Length = 227 Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 98/234 (41%), Positives = 128/234 (54%), Gaps = 48/234 (20%) Query: 25 MCGGIVGALSSAAPARPTPAPTLASALASQAASPLPRVIPIRIAGSAQVQAFGQDLVRVL 84 MCGG++GAL+ A PA + G+ L +L Sbjct: 25 MCGGLMGALTLAIPA----------------------------------EQRGRRLRLLL 50 Query: 85 GYNLGRLSSYALAGALAGGIAAGLLRGADVLGWLAPAQTLA---YVITNLVLVLLGLYLT 141 YNLGR+ SYA AG L G + GW LA V+ L+L+ +GLYL Sbjct: 51 AYNLGRILSYACAGLLLG-----------LAGWAVARTPLAGALRVVAGLLLIAMGLYLA 99 Query: 142 QWWTGMSRMEQLGSGLWARLRPHAARLVPVDTPAKALLLGSLWGWLPCGMVYSALLTALM 201 WW+G++R+E LG GLW L P A RL+PV + +ALLLG++WGWLPCG+VYS LL A Sbjct: 100 GWWSGLTRVEALGRGLWRHLEPFARRLLPVSSLPRALLLGAIWGWLPCGLVYSTLLWATS 159 Query: 202 AGSAVQGALTMLAFGTGTLPVLLVAGLSGARLRQLAARPAVRRVAGVIVLAFGI 255 GSA+ AL MLAFG GT PVLL G++ R+ L R VR V G++V+ FG+ Sbjct: 160 QGSALDSALLMLAFGLGTWPVLLATGMAAERVTALLRRRGVRIVGGLMVILFGL 213 >VC1435 [S] COG2836 Uncharacterized conserved protein Vch Vibrio cholerae Length = 224 Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 88/258 (34%), Positives = 132/258 (51%), Gaps = 42/258 (16%) Query: 7 NLLPIFLVGLMGSVHCIGMCGGIVGALSSAAPARPTPAPTLASALASQAASPLPRVIPIR 66 + L ++VGL+G+ HC+GMCGGI AL + P++ +PA Sbjct: 4 DYLGAWVVGLLGAGHCLGMCGGI-SALLTLDPSKSSPA---------------------- 40 Query: 67 IAGSAQVQAFGQDLVRVLGYNLGRLSSYALAGALAGGIAAGLLRGADVLGWLAPAQTLAY 126 +L YNLGRL SYAL G + GGI A L DV A Sbjct: 41 ---------------LLLYYNLGRLLSYALIGGIVGGITASLTELIDV----QSALVWLR 81 Query: 127 VITNLVLVLLGLYLTQWWTGMSRMEQLGSGLWARLRPHAARLVPVDTPAKALLLGSLWGW 186 + +++++LGLY+ +WW G+ +E++G +W + P L+P+ AL G +WGW Sbjct: 82 IFAAVLMIVLGLYIGRWWFGLLWLEKVGQKIWRWISPLGKTLLPLKKQWHALPFGLVWGW 141 Query: 187 LPCGMVYSALLTALMAGSAVQGALTMLAFGTGTLPVLLVAGLSGARLRQLAARPAVRRVA 246 LPCG+VYS L + +AGS QGAL ML+FG GTLP +L +G +L R+ A Sbjct: 142 LPCGLVYSMLTWSAVAGSFSQGALIMLSFGFGTLPAMLASGWGANKLMHWQNSHLFRQCA 201 Query: 247 GVIVLAFGILGLLRAAEI 264 ++V+ +G+ A ++ Sbjct: 202 AILVIGYGLFTAYDAVKL 219 >NMB0759 [S] COG2836 Uncharacterized conserved protein Nme Neisseria meningitidis MC58 Length = 242 Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 82/232 (35%), Positives = 111/232 (47%), Gaps = 44/232 (18%) Query: 21 HCIGMCGGIVGALSSAAPARPTPAPTLASALASQAASPLPRVIPIRIAGSAQVQAFGQDL 80 HCIGMCGG L+SA A Q + R Sbjct: 40 HCIGMCGG------------------LSSAFALQLPPHINR------------------F 63 Query: 81 VRVLGYNLGRLSSYALAGALAG--GIAAGLLRGADVLGWLAPAQTLAYVITNLVLVLLGL 138 +L N GR+SSY G + G G L VL Q + Y NL+L+ LGL Sbjct: 64 WLILLLNTGRVSSYTAIGLILGLIGQVGVSLDQTRVL------QNILYTAANLLLLFLGL 117 Query: 139 YLTQWWTGMSRMEQLGSGLWARLRPHAARLVPVDTPAKALLLGSLWGWLPCGMVYSALLT 198 YL+ + +++E++G +W L P RL+P+ + L +G LWGWLPCG+VYSA L Sbjct: 118 YLSGISSLAAKIEKIGKPIWRNLNPILNRLLPIKSIPACLAVGILWGWLPCGLVYSASLY 177 Query: 199 ALMAGSAVQGALTMLAFGTGTLPVLLVAGLSGARLRQLAARPAVRRVAGVIV 250 AL +GSA G L MLAF GTLP LL G+ +L+++ +R G+ V Sbjct: 178 ALGSGSAATGGLYMLAFALGTLPNLLAIGIFSLQLKKIMQNRYIRLCTGLSV 229 >NMA0970 [S] COG2836 Uncharacterized conserved protein NmA Neisseria meningitidis Z2491 Length = 222 Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 82/232 (35%), Positives = 111/232 (47%), Gaps = 44/232 (18%) Query: 21 HCIGMCGGIVGALSSAAPARPTPAPTLASALASQAASPLPRVIPIRIAGSAQVQAFGQDL 80 HCIGMCGG L+SA A Q + R Sbjct: 20 HCIGMCGG------------------LSSAFALQLPPHINR------------------F 43 Query: 81 VRVLGYNLGRLSSYALAGALAG--GIAAGLLRGADVLGWLAPAQTLAYVITNLVLVLLGL 138 +L N GR+SSY G + G G L VL Q + Y NL+L+ LGL Sbjct: 44 WLILLLNTGRVSSYTAIGLILGLIGQVGVSLDQTRVL------QNILYTAANLLLLFLGL 97 Query: 139 YLTQWWTGMSRMEQLGSGLWARLRPHAARLVPVDTPAKALLLGSLWGWLPCGMVYSALLT 198 YL+ + +++E++G +W L P RL+P+ + L +G LWGWLPCG+VYSA L Sbjct: 98 YLSGISSLAAKIEKIGKPIWRNLNPILNRLLPIKSIPACLAVGILWGWLPCGLVYSASLY 157 Query: 199 ALMAGSAVQGALTMLAFGTGTLPVLLVAGLSGARLRQLAARPAVRRVAGVIV 250 AL +GSA G L MLAF GTLP LL G+ +L+++ +R G+ V Sbjct: 158 ALGSGSAATGGLYMLAFALGTLPNLLAIGIFSLQLKKIMQNRYIRLCTGLSV 209 >RSc1284 [S] COG2836 Uncharacterized conserved protein Rso Ralstonia solanacearum Length = 248 Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 95/263 (36%), Positives = 131/263 (49%), Gaps = 43/263 (16%) Query: 8 LLPIFLVGLMGSVHCIGMCGGIVGALSSAAPARPTPAPTLASALASQAASPLPRVIPIRI 67 LL +FL+ L+G VHC+ MC GI ALA++ A P R++ R Sbjct: 6 LLSVFLIALLGGVHCLAMCSGI--------------------ALAAERAQPAVRIVSRR- 44 Query: 68 AGSAQVQAFGQDLVRVLGYNLGRLSSYALAGALAGGIAAGLLRGADVLGWLAPAQTLAYV 127 + + + LV +LGRL++YAL GA G + A + R WL + L + Sbjct: 45 ------RLWFEQLV----MHLGRLTTYALLGAAMGALGATVWRQQ----WLPIQRGLFAL 90 Query: 128 ITNLVLVLLGLYLTQW----WTG--MSR-MEQLGSGLWARLRPHAARLVPVDTP-AKALL 179 + L+L L L++ W G + R + +L GL A A + P A L Sbjct: 91 ASALLLAYGLLLLSRTAADVWRGAWLERILGRLSGGLAAVASGVRASSLRARFPLAGRYL 150 Query: 180 LGSLWGWLPCGMVYSALLTALMAGSAVQGALTMLAFGTGTLPVLLVAGLSGARLRQLAAR 239 G WG +PCGMVY AL AL+AG+A GA+ MLAFG GTLP LL+ LR ++ Sbjct: 151 TGLAWGLVPCGMVYGALAVALLAGNAASGAVVMLAFGAGTLPNLLMMSGVAGWLRGVSRM 210 Query: 240 PAVRRVAGVIVLAFGILGLLRAA 262 R VAG+ + AFGI GL+ AA Sbjct: 211 RWARGVAGIGIAAFGIWGLVCAA 233