BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3162.p         (58 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NMB1516 [P] COG3197 Uncharacterized protein, possibly involved i...    64   8e-11
NMA1716 [P] COG3197 Uncharacterized protein, possibly involved i...    64   8e-11
PA1548 [P] COG3197 Uncharacterized protein, possibly involved in...    51   6e-07
VC1436 [P] COG3197 Uncharacterized protein, possibly involved in...    50   1e-06
RSc1275 [P] COG3197 Uncharacterized protein, possibly involved i...    48   6e-06

>NMB1516 [P] COG3197 Uncharacterized protein, possibly involved in
          nitrogen fixation Nme Neisseria meningitidis MC58
          Length = 62

 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 39/49 (79%)

Query: 1  MMEALYLLIPLSTLLVFLAIWVFFRASDSGQFDDLEGPAMRILHDDDTT 49
          MME++++L+P+S +L F+  W F+ +  +GQFDDLEGPA RIL DDD+T
Sbjct: 1  MMESMFILVPISIILAFVIGWFFWWSGKNGQFDDLEGPAHRILMDDDST 49


>NMA1716 [P] COG3197 Uncharacterized protein, possibly involved in
          nitrogen fixation NmA Neisseria meningitidis Z2491
          Length = 62

 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 39/49 (79%)

Query: 1  MMEALYLLIPLSTLLVFLAIWVFFRASDSGQFDDLEGPAMRILHDDDTT 49
          MME++++L+P+S +L F+  W F+ +  +GQFDDLEGPA RIL DDD+T
Sbjct: 1  MMESMFILVPISIILAFVIGWFFWWSGKNGQFDDLEGPAHRILMDDDST 49


>PA1548 [P] COG3197 Uncharacterized protein, possibly involved in
          nitrogen fixation Pae Pseudomonas aeruginosa
          Length = 69

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 41/56 (73%)

Query: 2  MEALYLLIPLSTLLVFLAIWVFFRASDSGQFDDLEGPAMRILHDDDTTPDRHGSDT 57
          M ALY+LIP++ ++V +AI+VFF A DSGQ+DDL+GPA  IL DD+    + G D 
Sbjct: 1  MAALYILIPVAIVIVAIAIYVFFWAVDSGQYDDLDGPAHSILFDDEDPKHQAGVDE 56


>VC1436 [P] COG3197 Uncharacterized protein, possibly involved in
          nitrogen fixation Vch Vibrio cholerae
          Length = 54

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 35/51 (68%)

Query: 2  MEALYLLIPLSTLLVFLAIWVFFRASDSGQFDDLEGPAMRILHDDDTTPDR 52
          ME+LYLLIP++ +LV +A+ +F  A  S QF+DLE     IL +D+ + D+
Sbjct: 1  MESLYLLIPIAIVLVCVAVGIFLWAVKSEQFEDLERQGHNILFEDEESQDK 51


>RSc1275 [P] COG3197 Uncharacterized protein, possibly involved in
          nitrogen fixation Rso Ralstonia solanacearum
          Length = 58

 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 33/55 (60%)

Query: 2  MEALYLLIPLSTLLVFLAIWVFFRASDSGQFDDLEGPAMRILHDDDTTPDRHGSD 56
          ME LYLL+PLS + V + +   + A  +GQ+DDL+ PA  IL D D  PD    D
Sbjct: 1  METLYLLVPLSLMAVAVIVSALWWAVGTGQYDDLKAPAESILLDRDLPPDVSPRD 55