BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3150.p         (153 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0645 [K] COG1522 Transcriptional regulators Rso Ralstonia sol...   154   9e-38
VC1904 [K] COG1522 Transcriptional regulators Vch Vibrio cholerae     147   7e-36
lrp [K] COG1522 Transcriptional regulators Eco Escherichia coli K12   145   3e-35
Zlrp [K] COG1522 Transcriptional regulators EcZ Escherichia coli...   145   3e-35
ECs0974 [K] COG1522 Transcriptional regulators Ecs Escherichia c...   145   3e-35

>RSp0645 [K] COG1522 Transcriptional regulators Rso Ralstonia solanacearum
          Length = 186

 Score =  154 bits (388), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 74/151 (49%), Positives = 105/151 (69%)

Query: 2   SLDRMDKRILKALQKDGRIGNAELAKKLGMSATACWNHTKRLMDEGYVKEVRAILDPEKL 61
           +LDR D+ ILK LQ+D  I N  LA K+ +S  AC    +RL + G ++ V A+L+P+ L
Sbjct: 35  ALDRTDRAILKWLQRDASISNVALADKVSLSPPACLRRVERLKELGCIRGVVALLEPKAL 94

Query: 62  GLPVLVTVGVVLDRSTPESFAEFEKAVREIAAVQECLLLAGEFDYWIKLRVKDLQAFNRL 121
            L  LV +GVVLDRSTPESFA+FEKAV+++    EC ++ GEFDY++ +R +D  ++NRL
Sbjct: 95  DLGTLVMIGVVLDRSTPESFADFEKAVQKVPGCLECHVVTGEFDYFMLVRTRDNDSYNRL 154

Query: 122 HANTLLRLPGVRQLRSFFVLNEVKNNPELVV 152
           HA  LL LPGVRQ+R+F  L +V +  +L +
Sbjct: 155 HAEQLLYLPGVRQIRTFMTLKQVLSTTQLPI 185


>VC1904 [K] COG1522 Transcriptional regulators Vch Vibrio cholerae
          Length = 164

 Score =  147 bits (372), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 68/151 (45%), Positives = 103/151 (68%)

Query: 3   LDRMDKRILKALQKDGRIGNAELAKKLGMSATACWNHTKRLMDEGYVKEVRAILDPEKLG 62
           LDR+D+ IL  LQKDGRI N EL+K++G+S T C    +RL  +G++    A+L+P+ L 
Sbjct: 12  LDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFITGYTALLNPQYLD 71

Query: 63  LPVLVTVGVVLDRSTPESFAEFEKAVREIAAVQECLLLAGEFDYWIKLRVKDLQAFNRLH 122
             +LV V + L+R  P+ F +F  AV+++  +QEC L++G+FDY +K RV D+ A+ RL 
Sbjct: 72  ASLLVFVEITLNRGAPDVFEQFNAAVQKLDDIQECHLVSGDFDYLLKTRVSDMGAYRRLL 131

Query: 123 ANTLLRLPGVRQLRSFFVLNEVKNNPELVVE 153
            +TLLRLPGV   R++ V+ EVK   +LV++
Sbjct: 132 GDTLLRLPGVNDTRTYVVMEEVKQTNQLVIK 162


>lrp [K] COG1522 Transcriptional regulators Eco Escherichia coli K12
          Length = 164

 Score =  145 bits (366), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 67/151 (44%), Positives = 102/151 (67%)

Query: 3   LDRMDKRILKALQKDGRIGNAELAKKLGMSATACWNHTKRLMDEGYVKEVRAILDPEKLG 62
           LDR+D+ IL  LQKDGRI N EL+K++G+S T C    +RL  +G+++   A+L+P  L 
Sbjct: 12  LDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLD 71

Query: 63  LPVLVTVGVVLDRSTPESFAEFEKAVREIAAVQECLLLAGEFDYWIKLRVKDLQAFNRLH 122
             +LV V + L+R  P+ F +F  AV+++  +QEC L++G+FDY +K RV D+ A+ +L 
Sbjct: 72  ASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLL 131

Query: 123 ANTLLRLPGVRQLRSFFVLNEVKNNPELVVE 153
             TLLRLPGV   R++ V+ EVK +  LV++
Sbjct: 132 GETLLRLPGVNDTRTYVVMEEVKQSNRLVIK 162


>Zlrp [K] COG1522 Transcriptional regulators EcZ Escherichia coli O157:H7
           EDL933
          Length = 164

 Score =  145 bits (366), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 67/151 (44%), Positives = 102/151 (67%)

Query: 3   LDRMDKRILKALQKDGRIGNAELAKKLGMSATACWNHTKRLMDEGYVKEVRAILDPEKLG 62
           LDR+D+ IL  LQKDGRI N EL+K++G+S T C    +RL  +G+++   A+L+P  L 
Sbjct: 12  LDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLD 71

Query: 63  LPVLVTVGVVLDRSTPESFAEFEKAVREIAAVQECLLLAGEFDYWIKLRVKDLQAFNRLH 122
             +LV V + L+R  P+ F +F  AV+++  +QEC L++G+FDY +K RV D+ A+ +L 
Sbjct: 72  ASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLL 131

Query: 123 ANTLLRLPGVRQLRSFFVLNEVKNNPELVVE 153
             TLLRLPGV   R++ V+ EVK +  LV++
Sbjct: 132 GETLLRLPGVNDTRTYVVMEEVKQSNRLVIK 162


>ECs0974 [K] COG1522 Transcriptional regulators Ecs Escherichia coli O157:H7
          Length = 164

 Score =  145 bits (366), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 67/151 (44%), Positives = 102/151 (67%)

Query: 3   LDRMDKRILKALQKDGRIGNAELAKKLGMSATACWNHTKRLMDEGYVKEVRAILDPEKLG 62
           LDR+D+ IL  LQKDGRI N EL+K++G+S T C    +RL  +G+++   A+L+P  L 
Sbjct: 12  LDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLD 71

Query: 63  LPVLVTVGVVLDRSTPESFAEFEKAVREIAAVQECLLLAGEFDYWIKLRVKDLQAFNRLH 122
             +LV V + L+R  P+ F +F  AV+++  +QEC L++G+FDY +K RV D+ A+ +L 
Sbjct: 72  ASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLL 131

Query: 123 ANTLLRLPGVRQLRSFFVLNEVKNNPELVVE 153
             TLLRLPGV   R++ V+ EVK +  LV++
Sbjct: 132 GETLLRLPGVNDTRTYVVMEEVKQSNRLVIK 162