BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3128.p (295 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value NMB0587 [P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permea... 291 1e-78 NMA0790 [P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permea... 290 2e-78 mll8314 [P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permea... 248 1e-65 AGl3260 [P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permea... 240 3e-63 SA0588 [P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permeas... 143 4e-34 >NMB0587 [P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components Nme Neisseria meningitidis MC58 Length = 291 Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 155/292 (53%), Positives = 212/292 (72%), Gaps = 9/292 (3%) Query: 6 TFHELAIAPFEEFSFMRRALVAAFALALGSAPLGVLLTLRRMSLFGEALSHAVLPGVAVG 65 ++L +APF EF FMR AL + F L+L +AP+GV L +RRMSL G+ALSHAVLPG AVG Sbjct: 2 NLYDLLLAPFAEFDFMRYALASVFCLSLSAAPVGVFLVMRRMSLIGDALSHAVLPGAAVG 61 Query: 66 FIFFGLSLPALSIGGFAAGVVVVAVAGWISRHTELKEDASLAAIYVVALALGVILISRHG 125 ++F GLSLPA+ +GG AAG+++ +AG +SR T LKEDA+ AA Y+ +LA+GV+L+S++G Sbjct: 62 YMFAGLSLPAMGLGGVAAGMLMALLAGLVSRFTTLKEDANFAAFYLSSLAIGVVLVSKNG 121 Query: 126 TQLDLLHILFGNVLGVDSQGLVLIAGVASVSVLGIAALYRGLLLESFDPSYMAVGGGRSG 185 + +DLLH+LFG+VL VD L LIA V+S++++ +A +YR L+LES DP ++ GG+ Sbjct: 122 SSVDLLHLLFGSVLAVDIPALQLIAAVSSLTLITLAVIYRPLVLESIDPLFLKSVGGK-- 179 Query: 186 GAIYQQIFLMLVVMNLVASFQTLGTLMAVGLMMLPAVSARLWHDTLPAQLCNSVLQAALA 245 G ++ +FL+LVVMNLV+ FQ LGTLM+VGLMMLPA++ARLW + A + SVL A L Sbjct: 180 GGLWHVLFLVLVVMNLVSGFQALGTLMSVGLMMLPAITARLWAKHMGALILLSVLTALLC 239 Query: 246 GYAGLLISYYASVPSGPVIIVCGGVLYAASLLFAPRG-----WLPRLLRRPH 292 G +GLLISY+ +PSGP II+C VLY S++ G WL R H Sbjct: 240 GLSGLLISYHIEIPSGPAIILCCSVLYLFSVILGKEGGILTKWLKN--HRHH 289 >NMA0790 [P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components NmA Neisseria meningitidis Z2491 Length = 291 Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 155/290 (53%), Positives = 211/290 (72%), Gaps = 9/290 (3%) Query: 8 HELAIAPFEEFSFMRRALVAAFALALGSAPLGVLLTLRRMSLFGEALSHAVLPGVAVGFI 67 ++L I PF EF FMR AL + F L+L +AP+GV L +RRMSL G+ALSHAVLPG AVG++ Sbjct: 4 YDLLITPFAEFDFMRYALASVFCLSLSAAPVGVFLVMRRMSLIGDALSHAVLPGAAVGYM 63 Query: 68 FFGLSLPALSIGGFAAGVVVVAVAGWISRHTELKEDASLAAIYVVALALGVILISRHGTQ 127 F GLSLPA+ +GG AAG+++ +AG +SR T LKEDA+ AA Y+ +LA+GV+L+S++G+ Sbjct: 64 FAGLSLPAMGLGGVAAGMLMALLAGLVSRFTTLKEDANFAAFYLSSLAIGVVLVSKNGSS 123 Query: 128 LDLLHILFGNVLGVDSQGLVLIAGVASVSVLGIAALYRGLLLESFDPSYMAVGGGRSGGA 187 +DLLH+LFG+VL VD L LIA V+++++L +A +YR L+LES DP ++ GG+ G Sbjct: 124 VDLLHLLFGSVLAVDIPALQLIAAVSTLTLLTLAVIYRPLVLESIDPLFLKSVGGK--GG 181 Query: 188 IYQQIFLMLVVMNLVASFQTLGTLMAVGLMMLPAVSARLWHDTLPAQLCNSVLQAALAGY 247 ++ +FL+LVVMNLV+ FQ LGTLM+VGLMMLPA++ARLW + A + SVL A L G Sbjct: 182 LWHVLFLVLVVMNLVSGFQALGTLMSVGLMMLPAITARLWAKHMGALILLSVLTALLCGL 241 Query: 248 AGLLISYYASVPSGPVIIVCGGVLYAASLLFAPRG-----WLPRLLRRPH 292 +GLLISY+ +PSGP II+C VLY S++ G WL R H Sbjct: 242 SGLLISYHIEIPSGPAIILCCSVLYLFSVILGKEGGILTKWLKN--HRHH 289 >mll8314 [P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components Mlo Mesorhizobium loti Length = 291 Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 136/293 (46%), Positives = 201/293 (68%), Gaps = 3/293 (1%) Query: 4 LTTFHELAIAPFEEFSFMRRALVAAFALALGSAPLGVLLTLRRMSLFGEALSHAVLPGVA 63 + + L IAPF +F FM+RAL + L+LG+ P+GV L LRRMSL G+A++HA+LPG A Sbjct: 1 MDALYGLFIAPFADFGFMQRALFGSLMLSLGACPIGVFLMLRRMSLSGDAMAHAILPGAA 60 Query: 64 VGFIFFGLSLPALSIGGFAAGVVVVAVAGWISRHTELKEDASLAAIYVVALALGVILISR 123 GF+F+GL + +++GG AG++V AG +SR T +EDAS+AA Y+++LA+GV+++S Sbjct: 61 AGFLFYGLEILPMTVGGLIAGIIVALGAGAVSRFTIQREDASMAAFYLISLAIGVLMVSI 120 Query: 124 HGTQLDLLHILFGNVLGVDSQGLVLIAGVASVSVLGIAALYRGLLLESFDPSYMAVGGGR 183 G+ +DL+H+LFG VL ++++ L LI G+ +V+++ +A +R L+ E DP ++ R Sbjct: 121 RGSSVDLMHVLFGTVLALNNEALTLIGGIVAVTLVSLAIFWRALVAECLDPLFLR-SVSR 179 Query: 184 SGGAIYQQIFLMLVVMNLVASFQTLGTLMAVGLMMLPAVSARLWHDTLPAQLCNSVLQAA 243 G ++ IFL LVV+NLV FQ LGTL++VGLMMLPA +AR W + +VL Sbjct: 180 MGSPVH-FIFLGLVVLNLVGGFQALGTLLSVGLMMLPAAAARFWTVRVEPMCVLAVLIGF 238 Query: 244 LAGYAGLLISYYASVPSGPVIIVCGGVLYAASLLFAPRGWL-PRLLRRPHLQA 295 + AGLL+SY+AS+PSGP II+ GV+Y AS+LF RG L R++ H A Sbjct: 239 ASCIAGLLLSYHASLPSGPAIILSAGVVYFASILFGTRGILRARIIHHRHRTA 291 >AGl3260 [P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 311 Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 131/280 (46%), Positives = 192/280 (68%), Gaps = 2/280 (0%) Query: 9 ELAIAPFEEFSFMRRALVAAFALALGSAPLGVLLTLRRMSLFGEALSHAVLPGVAVGFIF 68 + I PF ++ FM+RAL A LA+ P+GV L LRRMSL G+A+SHA+LPG AVGF+F Sbjct: 26 DFFIEPFVQYVFMQRALAGALILAISCGPVGVFLMLRRMSLTGDAMSHAILPGAAVGFLF 85 Query: 69 FGLSLPALSIGGFAAGVVVVAVAGWISRHTELKEDASLAAIYVVALALGVILISRHGTQL 128 +GL + ++IGG G+VV AG +SR T KEDASLAA+Y+++LALGV+L+S G+ + Sbjct: 86 YGLEILPMTIGGLVVGLVVALGAGAVSRFTVQKEDASLAALYLISLALGVLLVSWRGSSV 145 Query: 129 DLLHILFGNVLGVDSQGLVLIAGVASVSVLGIAALYRGLLLESFDPSYMAVGGGRSGGAI 188 DL+H+LFG VL ++++ L LI G+ V+++ + +R LL E DP ++ + G+ Sbjct: 146 DLMHVLFGTVLALNNEALGLIGGICIVTLVVMITFWRALLAECLDPLFLR--SVSNWGSP 203 Query: 189 YQQIFLMLVVMNLVASFQTLGTLMAVGLMMLPAVSARLWHDTLPAQLCNSVLQAALAGYA 248 +FL +VV+NLV FQ LGTL++VGLMMLPA ++R W + + S+ ++ +A Sbjct: 204 VHFLFLAIVVLNLVGGFQALGTLLSVGLMMLPAAASRFWSNRVAPMCFISIGIGMVSCFA 263 Query: 249 GLLISYYASVPSGPVIIVCGGVLYAASLLFAPRGWLPRLL 288 GL++SY+AS+PSGP I++ GV+YA S+L RG L LL Sbjct: 264 GLILSYHASLPSGPAIVLSAGVIYALSILVGTRGVLGDLL 303 >SA0588 [P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components Sau Staphylococcus aureus N315 Length = 278 Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 84/264 (31%), Positives = 148/264 (56%), Gaps = 6/264 (2%) Query: 17 EFSFMRRALVAAFALALGSAPLGVLLTLRRMSLFGEALSHAVLPGVAVGFIFFGLSLPAL 76 + F+ RAL+ + + + +G L+ LR +SL G+A+SHAVLPGVA+ F+F +P Sbjct: 10 TYQFLNRALITSIIVGIVCGTVGSLIVLRGLSLMGDAMSHAVLPGVALSFLF---GIPMF 66 Query: 77 SIGGFAAGVVVVAVAGWISRHTELKEDASLAAIYVVALALGVILISRHGTQLDLLHILFG 136 +G G++ G+I+ ++ K DA++ + LA G+I+IS T DL HILFG Sbjct: 67 -VGALITGMIASIFIGYITSSSKTKPDAAIGISFTAFLASGIIIISLINTTTDLYHILFG 125 Query: 137 NVLGVDSQGLVLIAGVASVSVLGIAALYRGLLLESFDPSYMAVGGGRSGGAIYQQIFLML 196 N+L + + + + S+ ++ I YR L++ +FDP++ + G + + ++L Sbjct: 126 NLLAITNSAFLTTIVIGSIVLILIIIFYRPLMISTFDPTFSRMSGLNT--TLLHYFVMLL 183 Query: 197 VVMNLVASFQTLGTLMAVGLMMLPAVSARLWHDTLPAQLCNSVLQAALAGYAGLLISYYA 256 + + VAS QT+G ++ V L++ PA +A L L + + + L + ++ GL SY Sbjct: 184 LSLVTVASIQTVGIILVVALLITPASTAFLISKKLYSMMIIASLISVISSIVGLYYSYIY 243 Query: 257 SVPSGPVIIVCGGVLYAASLLFAP 280 ++PSG I++C V+Y +L F Sbjct: 244 NIPSGATIVLCTFVIYIITLFFTK 267