BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3107.p         (171 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1023 [O] COG1076 DnaJ-domain-containing proteins 1 Rso Ralsto...   173   2e-43
NMB1383 [O] COG1076 DnaJ-domain-containing proteins 1 Nme Neisse...   134   7e-32
NMA1598 [O] COG1076 DnaJ-domain-containing proteins 1 NmA Neisse...   132   3e-31
VC0751 [O] COG1076 DnaJ-domain-containing proteins 1 Vch Vibrio ...   113   2e-25
hscB [O] COG1076 DnaJ-domain-containing proteins 1 Eco Escherich...   112   5e-25

>RSc1023 [O] COG1076 DnaJ-domain-containing proteins 1 Rso Ralstonia
           solanacearum
          Length = 176

 Score =  173 bits (438), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/165 (60%), Positives = 119/165 (72%), Gaps = 1/165 (0%)

Query: 3   NHYDLFQLPQRFAVDQKALEQAYHQVQSQAHPDKFAHASDAEKRVAMQWATRANEAYQTL 62
            H+ LF LP+ F VD  AL  AY  VQS+AHPD+ AHASDAE+RVAMQWATRANEAYQTL
Sbjct: 7   THFSLFGLPEHFEVDDGALNAAYRTVQSRAHPDRHAHASDAERRVAMQWATRANEAYQTL 66

Query: 63  KNPLKRARYLCELHGVDLQTESNTAMAPAFLMQQMEWREMLDDAKAGKDVDALERLNAEL 122
           ++PLKRA YL  L GVD+Q E+NTAM PAFLMQQ+EWRE L DAKA  D+DAL+ L A L
Sbjct: 67  RDPLKRATYLLHLRGVDVQAENNTAMPPAFLMQQLEWRESLADAKAAGDLDALDDLLAML 126

Query: 123 LAEKKAEIARIEALLDAADY-AAAGQLVRQLMFLDKFGAEIGDAF 166
             EK+A    +  LL+   + AAA   VRQLMF++K   +  +A 
Sbjct: 127 RGEKRARYQTLAGLLNGGGHDAAAADAVRQLMFIEKIERDTAEAI 171


>NMB1383 [O] COG1076 DnaJ-domain-containing proteins 1 Nme Neisseria
           meningitidis MC58
          Length = 166

 Score =  134 bits (338), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 102/165 (61%)

Query: 1   MQNHYDLFQLPQRFAVDQKALEQAYHQVQSQAHPDKFAHASDAEKRVAMQWATRANEAYQ 60
           M  ++ LF++   F +D + LEQ Y  + ++ HPDKFA AS  E++ A+  ++  N+AY+
Sbjct: 1   MSQYFTLFRIEPAFDIDTENLEQTYRALAARFHPDKFASASAFEQKQAVMMSSTINDAYR 60

Query: 61  TLKNPLKRARYLCELHGVDLQTESNTAMAPAFLMQQMEWREMLDDAKAGKDVDALERLNA 120
           TLKNP+ RA YL +  G+D     +TA AP FLMQQMEWRE L +A+AG D+++L+ L+ 
Sbjct: 61  TLKNPIDRAAYLLKTSGIDADAPEHTAFAPEFLMQQMEWRETLMEARAGNDLESLKNLDN 120

Query: 121 ELLAEKKAEIARIEALLDAADYAAAGQLVRQLMFLDKFGAEIGDA 165
           E+  E++     ++      DY  A Q VRQ  FLDK   EI  A
Sbjct: 121 EIRDEQEKLFCGLKQSFARQDYDTAAQQVRQGRFLDKLRNEISSA 165


>NMA1598 [O] COG1076 DnaJ-domain-containing proteins 1 NmA Neisseria
           meningitidis Z2491
          Length = 166

 Score =  132 bits (332), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 102/165 (61%)

Query: 1   MQNHYDLFQLPQRFAVDQKALEQAYHQVQSQAHPDKFAHASDAEKRVAMQWATRANEAYQ 60
           M  ++ LF++   F +D + LEQ Y  + ++ HPDKFA AS  E++ A+  ++  N+AY+
Sbjct: 1   MSQYFTLFRIEPAFDIDTENLEQTYRALAARFHPDKFASASAFEQKQAVMMSSTINDAYR 60

Query: 61  TLKNPLKRARYLCELHGVDLQTESNTAMAPAFLMQQMEWREMLDDAKAGKDVDALERLNA 120
           TLKNP+ RA YL +  G+D     +T+ A  FLMQQMEWRE L +A+AGKD+++L+ L+ 
Sbjct: 61  TLKNPIDRAAYLLKTSGIDADAPEHTSFASEFLMQQMEWRETLMEARAGKDLESLKNLDN 120

Query: 121 ELLAEKKAEIARIEALLDAADYAAAGQLVRQLMFLDKFGAEIGDA 165
           E+  E++     ++      DY  A Q VRQ  FLDK   EI  A
Sbjct: 121 EIRDEQEKLFCGLKQSFARQDYDTAAQQVRQGRFLDKLRNEISSA 165


>VC0751 [O] COG1076 DnaJ-domain-containing proteins 1 Vch Vibrio cholerae
          Length = 171

 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 99/161 (61%), Gaps = 1/161 (0%)

Query: 3   NHYDLFQLPQRFAVDQKALEQAYHQVQSQAHPDKFAHASDAEKRVAMQWATRANEAYQTL 62
           N+++LF LP +F +D   L   +  +Q + HPD FA AS+ ++ +A+Q A + N+AYQTL
Sbjct: 2   NYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTL 61

Query: 63  KNPLKRARYLCELHGVDLQTESNTAMAPAFLMQQMEWREMLDDAKAGKDVD-ALERLNAE 121
           K+PL+RA YL  L G+++  E  T   P FLM+QME RE L+   A  D + AL   + +
Sbjct: 62  KDPLRRAEYLLSLQGIEMNAEQQTLQDPMFLMEQMELREELESVTACADPEAALVAFDTK 121

Query: 122 LLAEKKAEIARIEALLDAADYAAAGQLVRQLMFLDKFGAEI 162
           + A ++  +A+++  L  +++ AA   +R+L F+ K   E+
Sbjct: 122 VTAMQRHYLAQLQGQLAQSEWLAAADQIRKLKFIAKLKNEV 162


>hscB [O] COG1076 DnaJ-domain-containing proteins 1 Eco Escherichia coli
           K12
          Length = 171

 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 67/161 (41%), Positives = 94/161 (58%), Gaps = 6/161 (3%)

Query: 3   NHYDLFQLPQRFAVDQKALEQAYHQVQSQAHPDKFAHASDAEKRVAMQWATRANEAYQTL 62
           +++ LF LP R+ +D +AL   +  +Q Q HPDKFA  S AE+  A+Q +   N+A+QTL
Sbjct: 2   DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 63  KNPLKRARYLCELHGVDLQTESNTAMAPAFLMQQMEWREMLDDAKAGKDVDALERLNAEL 122
           ++PL RA YL  LHG DL +E +T    AFLM+Q+E RE LD+ +  KD   LE     +
Sbjct: 62  RHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRV 121

Query: 123 LAEKKAEIARIEAL---LDAADYAAAGQLVRQLMFLDKFGA 160
              KK    R + +   LD   + AA   VR+L FLDK  +
Sbjct: 122 ---KKMFDTRHQLMVEQLDNETWDAAADTVRKLRFLDKLRS 159