BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3077.p         (189 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Cgl2372 [E] COG0308 Aminopeptidase N Cgl Corynebacterium glutamicum    31   1.7  
PAE1802 Non COG                                                        30   2.3  
Z0972 [N] COG5492 Bacterial surface proteins containing Ig-like ...    30   2.9  
ECs0834 [N] COG5492 Bacterial surface proteins containing Ig-lik...    30   3.0  
YPO0339 Non COG                                                        30   4.1  

>Cgl2372 [E] COG0308 Aminopeptidase N Cgl Corynebacterium glutamicum
          Length = 867

 Score = 30.8 bits (68), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 16/83 (19%)

Query: 59  TFTVSSVGSSV----SSALVSIALGNISSVSISSFTLSGNGHTYTGIQQSSGDLQTFSLS 114
           +FTV   G +     ++++  + L N+S +   + TL  NG+            +TF ++
Sbjct: 43  SFTVRKAGDTFIDLRAASVEEVRLDNVS-IKDEALTLGKNGYD-----------ETFGIA 90

Query: 115 TNGLNPGLYTLSVAGSVLGSKGG 137
             GL PG +TL V  S+  S+ G
Sbjct: 91  LKGLTPGAHTLRVTASIPYSRTG 113


>PAE1802 Non COG
          Length = 701

 Score = 30.4 bits (67), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 3/82 (3%)

Query: 67  SSVSSALVSIALGNISSVSISSFTLSGNGHTY--TGIQQSSGDLQTFSLSTNGLNPGLYT 124
           S+VS+A+ +I+ G   +++ S+ T++ NG T+  T I   +G    +   TN   PG Y+
Sbjct: 187 SAVSAAVKTIS-GGFKTIAASNTTVAANGVTFTVTPIDLPNGTRYIWLAFTNVTQPGSYS 245

Query: 125 LSVAGSVLGSKGGSFAGNISVA 146
           L        S    F G ++ A
Sbjct: 246 LYYKVYDAASNAVYFEGTVTAA 267


>Z0972 [N] COG5492 Bacterial surface proteins containing Ig-like domains
           EcZ Escherichia coli O157:H7 EDL933
          Length = 249

 Score = 30.0 bits (66), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 4/69 (5%)

Query: 51  GKSFL-EKFTFTVSSVGSSVSSALVSIALGNISSVSISSFTLSGNGHTYTGIQQSSGDLQ 109
           G+ +L E+ T TV   G +V+ A  S+   N+ + +  +FT+  +G +   I   S D Q
Sbjct: 149 GRPYLAEEGTETVGVTGLTVAPASASV---NVGATTTLTFTVKPDGASDKAISVHSTDPQ 205

Query: 110 TFSLSTNGL 118
           T +++ NGL
Sbjct: 206 TATVTLNGL 214


>ECs0834 [N] COG5492 Bacterial surface proteins containing Ig-like domains
           Ecs Escherichia coli O157:H7
          Length = 247

 Score = 30.0 bits (66), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 4/69 (5%)

Query: 51  GKSFL-EKFTFTVSSVGSSVSSALVSIALGNISSVSISSFTLSGNGHTYTGIQQSSGDLQ 109
           G+ +L E+ T TV   G +V+ A  S+   N+ + +  +FT+  +G +   I   S D Q
Sbjct: 147 GRPYLAEEGTETVGVTGLTVAPASASV---NVGATTTLTFTVKPDGASDKAISVHSTDPQ 203

Query: 110 TFSLSTNGL 118
           T +++ NGL
Sbjct: 204 TATVTLNGL 212


>YPO0339 Non COG
          Length = 856

 Score = 29.6 bits (65), Expect = 4.1,   Method: Composition-based stats.
 Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 5/92 (5%)

Query: 33  VWTDATSTFNASFGTGTTGKSFLEKFTFTVSSVGSSVSSALVSIALGNISSVSISSFTLS 92
           V  D   +F+ S G  T    + + F+F  S  G S      S   GN  +   +     
Sbjct: 158 VSKDRLKSFSTSGGIDTVLGFYQDIFSFNNSLAGLSFEPQRYSD--GNTRNRYFAKADKG 215

Query: 93  GNGHTYTG---IQQSSGDLQTFSLSTNGLNPG 121
           G G  Y     I  SSG + TF LS N  N G
Sbjct: 216 GGGAAYYSNNWIASSSGSINTFWLSPNATNWG 247