BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3048.p (346 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BH1076 [G] COG3839 ABC-type sugar transport systems, ATPase comp... 318 1e-86 TM1232 [G] COG3839 ABC-type sugar transport systems, ATPase comp... 311 1e-84 PAB2336 [G] COG3839 ABC-type sugar transport systems, ATPase com... 308 9e-84 AGc4558 [G] COG3839 ABC-type sugar transport systems, ATPase com... 305 1e-82 APE1635 [G] COG3839 ABC-type sugar transport systems, ATPase com... 303 4e-82 >BH1076 [G] COG3839 ABC-type sugar transport systems, ATPase components Bha Bacillus halodurans Length = 378 Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 160/356 (44%), Positives = 230/356 (64%), Gaps = 14/356 (3%) Query: 1 MAAISLQGVCKQWGEAQ-AVKGIDFEVKSGDFTVLLGPSGCGKSTTLRLIAGLDKPTSGS 59 M+ + L +CK + + AV+ I+ +K G+F +L+GPSGCGKST LR+IAGL+ ++G Sbjct: 1 MSHVELLNLCKSYDQTTFAVEDINVSIKEGEFFILVGPSGCGKSTMLRMIAGLEDISAGE 60 Query: 60 IHIGGQDVTQLPPAQRKISMVFQSYALFPHLNVRDNILFGVRVRKEPRTGYEARLKRVAD 119 + I G LPP++R +SMVFQ+YAL+PHL V +NILFG++VRK + R +R A Sbjct: 61 LKIHGATANHLPPSKRNLSMVFQNYALYPHLTVEENILFGLKVRKVKKAERSERCQRAAA 120 Query: 120 ILGLTHLLERRPAQLSGGQQQRVALGRAIIADAPVCLMDEPLSNLDAQLRQEMRREIRAL 179 +LGLT L+R+P +LSGGQ+QRVAL RA++++AP+CLMDEPLSNLDA+LR MR EIR L Sbjct: 121 MLGLTDYLKRKPRELSGGQRQRVALARAVVSEAPLCLMDEPLSNLDAKLRGHMRTEIRQL 180 Query: 180 QQQLKMTMIYVTHDQTEAMSMADQVILLREGRIEQDAPPADLYAQPATTFAARFIGTPPM 239 Q+QL MTMIYVTHDQ EAM+M D++++L++G+++Q P D+Y PA F A FIG PPM Sbjct: 181 QRQLGMTMIYVTHDQVEAMTMGDRIMVLKDGQVQQVGSPLDIYNAPANLFVATFIGAPPM 240 Query: 240 NL-------LPLEAHAEGLSVAGSELILKDLGQTPLHLGLRPEHIRLADAGVP------A 286 N+ + E L + E +L + + LG+RPE I ADA P Sbjct: 241 NIAKATVDRMNRELAIGSLRLPIEEQLLMRISSDTVQLGIRPEQIARADAPTPEHVQWHV 300 Query: 287 VVDNVEYFGADTIVAARIGTAPLLVRAPGQHKLRAGQAIHLAWHAEDQYFFERHSG 342 + NVE G +T++A ++G + GQ + + I +++ E Y F+ +G Sbjct: 301 TLTNVEVLGNETLLAFKVGEHEWKAKWLGQWPYQLHETIAISFAKEHLYLFDGETG 356 >TM1232 [G] COG3839 ABC-type sugar transport systems, ATPase components Tma Thermotoga maritima Length = 355 Score = 311 bits (797), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 156/353 (44%), Positives = 226/353 (64%), Gaps = 9/353 (2%) Query: 1 MAAISLQGVCKQWGEAQAVKGIDFEVKSGDFTVLLGPSGCGKSTTLRLIAGLDKPTSGSI 60 MA + + GV K +G +A+ GID V G+F VLLGPSGCGK+T LR IAGL++ T G I Sbjct: 1 MAQVKIDGVKKYFGNVRALDGIDLVVNEGEFLVLLGPSGCGKTTLLRCIAGLEQVTGGKI 60 Query: 61 HIGGQDVTQLPPAQRKISMVFQSYALFPHLNVRDNILFGVRVRKEPRTGYEARLKRVADI 120 +DVT LPP R ISMVFQSYA++PH+ V DNI + ++++K P+ E R+K AD+ Sbjct: 61 FFNDRDVTNLPPKDRNISMVFQSYAVWPHMKVYDNIAYPLKLKKVPKEEIEKRVKWAADL 120 Query: 121 LGLTHLLERRPAQLSGGQQQRVALGRAIIADAPVCLMDEPLSNLDAQLRQEMRREIRALQ 180 L ++ LL+R PAQLSGGQ+QRVA+ RAI+ + V LMDEPLSNLDA LR +MR E++ LQ Sbjct: 121 LHISELLDRYPAQLSGGQRQRVAVARAIVHEPEVLLMDEPLSNLDALLRVKMRSELKKLQ 180 Query: 181 QQLKMTMIYVTHDQTEAMSMADQVILLREGRIEQDAPPADLYAQPATTFAARFIGTPPMN 240 +++ +T IYVTHDQTEAM+M D++ ++ +G+++Q P+++Y P F A F+G+P MN Sbjct: 181 ERIGVTTIYVTHDQTEAMTMGDRIAVMNQGKLQQVGTPSEIYHHPVNIFVAGFVGSPQMN 240 Query: 241 LLPLEAHAEGLSVAGSELILK-----DLGQTPLHLGLRPEHIRLADAGVPAVVDNVEYFG 295 L +E +EG SV +K D G + LG+RPE++ L + ++ YF Sbjct: 241 FLEMEVRSEGNSVVLQNGEIKIPAKTDPGAKKVILGIRPENVYLEEKPNTLKLEGEVYFA 300 Query: 296 ----ADTIVAARIGTAPLLVRAPGQHKLRAGQAIHLAWHAEDQYFFERHSGLR 344 +DTI+ +G+ ++ + PG R+G+ I E + F +G R Sbjct: 301 EKLMSDTILHLNVGSEKIVAKIPGDVDFRSGEKITFFLDVEKIHLFHPETGER 353 >PAB2336 [G] COG3839 ABC-type sugar transport systems, ATPase components Pab Pyrococcus abyssi Length = 364 Score = 308 bits (790), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 157/360 (43%), Positives = 232/360 (64%), Gaps = 20/360 (5%) Query: 1 MAAISLQGVCKQWGEAQAVKGIDFEVKSGDFTVLLGPSGCGKSTTLRLIAGLDKPTSGSI 60 M + L+ + K++G AV ++ +K G+F VLLGPSGCGK+TTLR+IAGL++PT G I Sbjct: 1 MVEVRLENLTKKFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGKI 60 Query: 61 HIGGQDVTQLPPAQRKISMVFQSYALFPHLNVRDNILFGVRVRKEPRTGYEARLKRVADI 120 + G ++VT LPP +R ISMVFQSYA++PH+ V DNI F ++++K PR + R++ A++ Sbjct: 61 YFGDREVTYLPPRERNISMVFQSYAVWPHMTVYDNIAFPLKIKKFPRDEIDKRVRWAAEL 120 Query: 121 LGLTHLLERRPAQLSGGQQQRVALGRAIIADAPVCLMDEPLSNLDAQLRQEMRREIRALQ 180 L + LL+R PAQLSGGQ+QRVA+ RAI+ + V LMDEPLSNLDA+LR MR EI+ LQ Sbjct: 121 LQIEELLDRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQ 180 Query: 181 QQLKMTMIYVTHDQTEAMSMADQVILLREGRIEQDAPPADLYAQPATTFAARFIGTPPMN 240 Q+LK+T IYVTHDQ EAM+M D++ ++ G++ Q PP ++Y +P + F A FIG P MN Sbjct: 181 QKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQVGPPTEVYLKPNSVFVATFIGAPEMN 240 Query: 241 LLPL---EAHAEG------LSVAGSELILKDLGQTPLHLGLRPEHIRL----------AD 281 ++ + + + EG L EL+ +G+T L G+RPEH+ + Sbjct: 241 IVEVSVGDGYLEGKGFKIELPQDIMELLRDYIGKTVL-FGIRPEHMTVEGVSELAHMKKT 299 Query: 282 AGVPAVVDNVEYFGADTIVAARIGTAPLLVRAPGQHKLRAGQAIHLAWHAEDQYFFERHS 341 A + A VD VE G DTI+ + G + V+ PG + G+ + + + + F++ + Sbjct: 300 AKLNAKVDFVEALGTDTILHVKFGDELVKVKLPGHIPIEVGKEVTIVIDLDMMHVFDKDT 359 >AGc4558 [G] COG3839 ABC-type sugar transport systems, ATPase components Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 352 Score = 305 bits (781), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 159/361 (44%), Positives = 226/361 (62%), Gaps = 27/361 (7%) Query: 1 MAAISLQGVCKQWGEAQAVKGIDFEVKSGDFTVLLGPSGCGKSTTLRLIAGLDKPTSGSI 60 MA +++Q V K++G + GID ++K G+F VL+GPSGCGKST LR+IAGL++ + G I Sbjct: 1 MAPVNIQNVQKRFGSVNVIHGIDIDIKDGEFVVLVGPSGCGKSTLLRMIAGLEELSDGEI 60 Query: 61 HIGGQDVTQLPPAQRKISMVFQSYALFPHLNVRDNILFGVRVRKEPRTGYEARLKRVADI 120 HIG ++V+ LP R I+MVFQ+YAL+PH+ V+DN+ F ++++K +A++ R A I Sbjct: 61 HIGPREVSHLPARDRDIAMVFQNYALYPHMTVKDNMGFALKLKKVSADETKAKVDRAAAI 120 Query: 121 LGLTHLLERRPAQLSGGQQQRVALGRAIIADAPVCLMDEPLSNLDAQLRQEMRREIRALQ 180 LGL LL+R P QLSGGQ+QRVA+GRA++ D V L DEPLSNLDA+LR +MR EI+A+ Sbjct: 121 LGLEKLLDRYPRQLSGGQRQRVAMGRALVRDPQVFLFDEPLSNLDAKLRVQMRGEIKAMH 180 Query: 181 QQLKMTMIYVTHDQTEAMSMADQVILLREGRIEQDAPPADLYAQPATTFAARFIGTPPMN 240 Q++ T IYVTHDQ EAM+MAD++++L +G IEQ P +LY PA F A FIG+P MN Sbjct: 181 QRIGTTTIYVTHDQVEAMTMADKIVVLHDGIIEQIGAPLELYDNPANLFVAGFIGSPAMN 240 Query: 241 L-----------------LPLEAHAEGLSVAGSELILKDLGQTPLHLGLRPEHIRLADAG 283 LPL AHA+ + G +L+ G+RPEHIR A++G Sbjct: 241 FIRGRVEEGVFRTIKGLSLPLPAHADIGKLGGRDLV----------YGVRPEHIRAAESG 290 Query: 284 VPAVVDNVEYFGADTIVAARIGTAPLLVRAPGQHKLRAGQAIHLAWHAEDQYFFERHSGL 343 + V+ VE G++ + + +R G IH+A + F++ SG Sbjct: 291 IEGRVELVEGTGSEIYTKLNCKGDEIACLFRERLNVRFGDTIHIAIDPATVHLFDKDSGK 350 Query: 344 R 344 R Sbjct: 351 R 351 >APE1635 [G] COG3839 ABC-type sugar transport systems, ATPase components Ape Aeropyrum pernix Length = 354 Score = 303 bits (775), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 156/345 (45%), Positives = 226/345 (65%), Gaps = 3/345 (0%) Query: 1 MAAISLQGVCKQWGEAQAVKGIDFEVKSGDFTVLLGPSGCGKSTTLRLIAGLDKPTSGSI 60 +A + L+G+ K++G+ A+KGID E+K G+ VLLGPSGCGK+TTLR++AGL++P +G + Sbjct: 3 VAGVRLEGIVKRFGKTVALKGIDLEIKDGEAVVLLGPSGCGKTTTLRIVAGLERPDAGRV 62 Query: 61 HIGGQDVTQLPPAQRKISMVFQSYALFPHLNVRDNILFGVRVRKEPRTGYEARLKRVADI 120 + G+DVT LPP R ++MVFQSYAL+PH+ V DNI F ++++K PR R++ A++ Sbjct: 63 YFDGRDVTGLPPKDRNVAMVFQSYALWPHMRVFDNIAFPLKIKKLPRDEIVRRVRWAAEL 122 Query: 121 LGLTHLLERRPAQLSGGQQQRVALGRAIIADAPVCLMDEPLSNLDAQLRQEMRREIRALQ 180 L + HLL+R P QLSGGQQQRVA+ RAI+ + V LMDEPLSNLDA LR +MR EI+ LQ Sbjct: 123 LEIDHLLDRYPHQLSGGQQQRVAVARAIVTEPEVLLMDEPLSNLDAILRIKMRSEIKKLQ 182 Query: 181 QQLKMTMIYVTHDQTEAMSMADQVILLREGRIEQDAPPADLYAQPATTFAARFIGTPPMN 240 ++L +TMIYVTHDQ EAM + D+++++ G I+Q P+D+Y +PA TF A FIG+P MN Sbjct: 183 RRLGVTMIYVTHDQVEAMVIGDRIVVMNFGEIQQVGTPSDVYHRPANTFVATFIGSPQMN 242 Query: 241 LLPLEAHAEGLSVAGSELILKDLGQTPLHLGLRPEHIRL--ADAGVPAVVDNVEYFGADT 298 L + L G + L + +G+RPE + L D A VD VE G+D+ Sbjct: 243 LFSGKVAGGRLEALGGIVEGVGLPDGEVLVGVRPEDVALGKGDLTFEAYVDFVEDLGSDS 302 Query: 299 IVAARIGTAPLLV-RAPGQHKLRAGQAIHLAWHAEDQYFFERHSG 342 +V + + ++V + G G + E + F++ SG Sbjct: 303 VVHLKTQSGQVIVAKLSGGEPPSPGSRVIAGVSREKIHIFDKESG 347