BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3028.p         (144 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp1107 [O] COG1764 Predicted redox protein, regulator of disulf...   201   3e-52
PA2850 [O] COG1764 Predicted redox protein, regulator of disulfi...   196   1e-50
XF1827 [O] COG1764 Predicted redox protein, regulator of disulfi...   184   5e-47
SMc00040 [O] COG1764 Predicted redox protein, regulator of disul...   177   5e-45
BMEII0409 [O] COG1764 Predicted redox protein, regulator of disu...   174   6e-44

>RSp1107 [O] COG1764 Predicted redox protein, regulator of disulfide bond
           formation Rso Ralstonia solanacearum
          Length = 141

 Score =  201 bits (512), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 96/139 (69%), Positives = 113/139 (81%)

Query: 6   IEKALYTATATATGGREGSAKSSDGVLDVKLSTPKELGGAGGNGTNPEQLFAAGYSACFL 65
           IE  LY A A ATGGR+G A + DG LDV+L+TP+ELGGAGG GTNPEQLFAAGYSACFL
Sbjct: 3   IETILYRAHANATGGRDGRAATDDGRLDVRLATPRELGGAGGEGTNPEQLFAAGYSACFL 62

Query: 66  GALKFVAGQEKVALPADASITGKVGIGQIPGGFGIEAELNISLPGIDQVVAQDLVNKAHQ 125
           GA+KFVA ++K+ LPAD S+ G VGIG IP GFGIE +L ISLPG+D+  AQ L+ +AH 
Sbjct: 63  GAMKFVAARDKLRLPADTSVQGSVGIGAIPNGFGIEVDLAISLPGMDRAEAQALIERAHI 122

Query: 126 VCPYSNATRDNINVTLNLV 144
           VCPYSNATR NI+V L+LV
Sbjct: 123 VCPYSNATRGNIDVRLSLV 141


>PA2850 [O] COG1764 Predicted redox protein, regulator of disulfide bond
           formation Pae Pseudomonas aeruginosa
          Length = 142

 Score =  196 bits (499), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 108/136 (79%), Positives = 120/136 (88%)

Query: 8   KALYTATATATGGREGSAKSSDGVLDVKLSTPKELGGAGGNGTNPEQLFAAGYSACFLGA 67
           KALYTATATATGGR+G A SSDGVLDVKLSTP+ELGG GG  TNPEQLFAAGYSACF+GA
Sbjct: 5   KALYTATATATGGRDGRAVSSDGVLDVKLSTPRELGGQGGAATNPEQLFAAGYSACFIGA 64

Query: 68  LKFVAGQEKVALPADASITGKVGIGQIPGGFGIEAELNISLPGIDQVVAQDLVNKAHQVC 127
           LKFVAGQ K  LPADASITGKVGIGQIPGGFG+E EL+I+LPG+++  A+ LV  AHQVC
Sbjct: 65  LKFVAGQRKQTLPADASITGKVGIGQIPGGFGLEVELHINLPGLEREAAEALVAAAHQVC 124

Query: 128 PYSNATRDNINVTLNL 143
           PYSNATR NI+V LN+
Sbjct: 125 PYSNATRGNIDVRLNV 140


>XF1827 [O] COG1764 Predicted redox protein, regulator of disulfide bond
           formation Xfa Xylella fastidiosa 9a5c
          Length = 143

 Score =  184 bits (467), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 94/141 (66%), Positives = 116/141 (82%)

Query: 4   NKIEKALYTATATATGGREGSAKSSDGVLDVKLSTPKELGGAGGNGTNPEQLFAAGYSAC 63
           N +EK LYTA  TATGGR+GS  SSD VL+VKLS P+ LGG GG+GTNPEQLFAAGYSAC
Sbjct: 2   NSLEKVLYTAIVTATGGRDGSVVSSDNVLNVKLSVPQGLGGPGGSGTNPEQLFAAGYSAC 61

Query: 64  FLGALKFVAGQEKVALPADASITGKVGIGQIPGGFGIEAELNISLPGIDQVVAQDLVNKA 123
           F+GALKFVA +EKV LPA+  + G+VGIG+IPGGFG+  EL I++ G+++ + Q LV+KA
Sbjct: 62  FIGALKFVANKEKVDLPAEPRVEGRVGIGEIPGGFGLVVELRIAVSGMERSMLQTLVDKA 121

Query: 124 HQVCPYSNATRDNINVTLNLV 144
           H+VCPYSNATR NI+V L L+
Sbjct: 122 HRVCPYSNATRGNIDVVLILI 142


>SMc00040 [O] COG1764 Predicted redox protein, regulator of disulfide bond
           formation Sme Sinorhizobium meliloti
          Length = 140

 Score =  177 bits (450), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 90/136 (66%), Positives = 104/136 (76%), Gaps = 2/136 (1%)

Query: 10  LYTATATATGGREGSAKSSDGVLDVKLSTPKELGGAGGNGTNPEQLFAAGYSACFLGALK 69
           LY  TA+ATGGR G AKS DGVLDV L+ PKELGG G  GTNPEQLFAAGYSACFLGALK
Sbjct: 4   LYRTTASATGGRAGQAKSKDGVLDVTLTVPKELGGDGARGTNPEQLFAAGYSACFLGALK 63

Query: 70  FVAGQEKVALPADASITGKVGIGQIPG--GFGIEAELNISLPGIDQVVAQDLVNKAHQVC 127
           FVAG+EKV L  D ++TG VGIG      GF I+A L IS PG+++ V +DLV KAH VC
Sbjct: 64  FVAGKEKVKLAEDTTVTGTVGIGPRDDGTGFFIDAALEISSPGVEKAVLEDLVQKAHIVC 123

Query: 128 PYSNATRDNINVTLNL 143
           PYS+ATR N++V L +
Sbjct: 124 PYSHATRGNVDVKLTV 139


>BMEII0409 [O] COG1764 Predicted redox protein, regulator of disulfide bond
           formation Bme Brucella melitensis
          Length = 149

 Score =  174 bits (441), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 88/148 (59%), Positives = 115/148 (77%), Gaps = 5/148 (3%)

Query: 1   MPSNKIEKA---LYTATATATGGREGSAKSSDGVLDVKLSTPKELGGAGGNGTNPEQLFA 57
           M SN+ E A   LYT  +TATGGR GSAK++DG L V L TPKELGG GG GTNPEQLFA
Sbjct: 1   MRSNQGEIAMPILYTTQSTATGGRTGSAKTADGRLSVVLDTPKELGGQGGEGTNPEQLFA 60

Query: 58  AGYSACFLGALKFVAGQEKVALPADASITGKVGIG--QIPGGFGIEAELNISLPGIDQVV 115
           +GY+ACFLGALKF A +EK+++PA++++T  VGIG  +   GFG++  L+I+LPGID+  
Sbjct: 61  SGYAACFLGALKFAAAKEKISIPAESTVTATVGIGPREDGTGFGLDVALSIALPGIDKAK 120

Query: 116 AQDLVNKAHQVCPYSNATRDNINVTLNL 143
           A++LV  AH VCPYS+ATR N++V L++
Sbjct: 121 AEELVQAAHIVCPYSHATRGNLDVRLSV 148