BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2973.p (297 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp1267 [K] COG0583 Transcriptional regulator Rso Ralstonia sola... 371 e-103 BMEII1077 [K] COG0583 Transcriptional regulator Bme Brucella mel... 301 9e-82 STM0859 [K] COG0583 Transcriptional regulator Sty Salmonella typ... 230 2e-60 PA0877 [K] COG0583 Transcriptional regulator Pae Pseudomonas aer... 229 6e-60 mlr2195 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium ... 211 2e-54 >RSp1267 [K] COG0583 Transcriptional regulator Rso Ralstonia solanacearum Length = 294 Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust. Identities = 183/287 (63%), Positives = 222/287 (77%) Query: 4 RFELSDLRLFLHIVESGSITAGAQRAHMALASASARIRNMEDALGTALLERGRRGVQSTD 63 RF+L+DLRLFLH ESGSITAGA+RAH+ LASASARIR ME ALG LL R RRGV++T Sbjct: 2 RFDLTDLRLFLHTAESGSITAGAERAHLTLASASARIRGMEAALGVPLLTRNRRGVETTA 61 Query: 64 AGRALAHHARMVAQQMEQMRDELGQYARGLKGHIRLLCNTSAMTEFLPEVLARFLAQHPY 123 AGR L HHAR+V QQME+MR ELG+YARGLKGH+RLL NT+AMTEFLPE L+ FLAQHP Sbjct: 62 AGRTLVHHARVVLQQMERMRGELGEYARGLKGHVRLLSNTAAMTEFLPETLSAFLAQHPE 121 Query: 124 TDIELEEKLSYEVVQAVVDGVADIGIIADSTDSGPLQTYPFRQDHLVAVLSRKHPLARRK 183 DI+LEE +S+E+V+AV G ADIGI+ D+ D L+T+PFR D LV V +R HPLA R+ Sbjct: 122 VDIDLEELVSHEIVEAVAQGRADIGIVNDAVDLSGLETFPFRHDRLVLVTARDHPLAARR 181 Query: 184 SLTFSELLGEDFVGLSGDSALQQHLSGHATRAGKRLQYRVRLRSFDGICRMVEHQVGIAV 243 + F + L EDFVGL+GD+ALQ +L+GHA RAG RL+YRVRLRSFD +CRMVE VG+ V Sbjct: 182 EIAFVDALQEDFVGLTGDNALQAYLAGHAARAGHRLKYRVRLRSFDAVCRMVERSVGVGV 241 Query: 244 MPETAALAGAARMDIRAIPLSDGWSRRQLLICVRGLEGLPGPTRELI 290 +PE AA+ M IR + L+D W+ R L ICVR + LP R+LI Sbjct: 242 IPEHAAIRLQRSMGIRRVGLTDAWATRLLRICVRRFDDLPAYARQLI 288 >BMEII1077 [K] COG0583 Transcriptional regulator Bme Brucella melitensis Length = 294 Score = 301 bits (772), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 150/287 (52%), Positives = 202/287 (70%) Query: 4 RFELSDLRLFLHIVESGSITAGAQRAHMALASASARIRNMEDALGTALLERGRRGVQSTD 63 RF+++DLRLF+ I E+GSIT GA +MAL +ASAR+R ME+ G ALL R R GV T Sbjct: 2 RFDVTDLRLFVSIAETGSITHGAAMVNMALGAASARVRGMEELAGVALLNRERLGVSITP 61 Query: 64 AGRALAHHARMVAQQMEQMRDELGQYARGLKGHIRLLCNTSAMTEFLPEVLARFLAQHPY 123 AGRAL H R+V QQ+ +M EL ++A GLKGH+RL NT+A+ EFLP L+ FL +P Sbjct: 62 AGRALLQHGRIVLQQLGRMHSELDEFAHGLKGHVRLFSNTNALAEFLPVALSSFLMDNPG 121 Query: 124 TDIELEEKLSYEVVQAVVDGVADIGIIADSTDSGPLQTYPFRQDHLVAVLSRKHPLARRK 183 +I+L+E LS E+V++VV+G+ADIGI+A + D L+T+PFR+D+LV V+ + HP ARR+ Sbjct: 122 VNIDLQEHLSDEIVRSVVEGIADIGIVAGTVDVASLETFPFREDYLVVVVPQGHPFARRR 181 Query: 184 SLTFSELLGEDFVGLSGDSALQQHLSGHATRAGKRLQYRVRLRSFDGICRMVEHQVGIAV 243 + F + L DF+GLS +ALQ LS HA R G+RL+ RV+LRSFD IC+MVE + GIA+ Sbjct: 182 RIAFKDTLDYDFIGLSQGAALQNFLSAHAMRMGQRLRLRVQLRSFDSICQMVESRAGIAI 241 Query: 244 MPETAALAGAARMDIRAIPLSDGWSRRQLLICVRGLEGLPGPTRELI 290 +P +AA M IR I L D W+ R+L ICVR L+ LP L+ Sbjct: 242 VPASAAKRLRRIMAIRIIALDDAWALRRLTICVRSLQDLPAHAARLV 288 >STM0859 [K] COG0583 Transcriptional regulator Sty Salmonella typhimurium LT2 Length = 296 Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 109/289 (37%), Positives = 179/289 (61%) Query: 5 FELSDLRLFLHIVESGSITAGAQRAHMALASASARIRNMEDALGTALLERGRRGVQSTDA 64 F++ DL+LFL I E GSIT GA++ +M+ AS S RIRN+E ++ LL R +G+ + A Sbjct: 3 FDIKDLKLFLAISEEGSITRGAEKTYMSAASGSVRIRNLEQSINLRLLYRSSKGITLSSA 62 Query: 65 GRALAHHARMVAQQMEQMRDELGQYARGLKGHIRLLCNTSAMTEFLPEVLARFLAQHPYT 124 G HHA ++ QME +R ++ ++ +G+KGH+R+ + +A+ E+LP +L+ FL + Sbjct: 63 GETFKHHASLIVNQMEMLRSDMQEHVKGIKGHVRIFSSITAIAEYLPPLLSHFLTLYNDV 122 Query: 125 DIELEEKLSYEVVQAVVDGVADIGIIADSTDSGPLQTYPFRQDHLVAVLSRKHPLARRKS 184 +I+L E S E+V++V++G D+GI+A + + L+ PFR D LV + + HP A RKS Sbjct: 123 NIDLREYPSPEIVRSVIEGKTDLGIVAGNITTDNLEILPFRTDRLVLITATDHPFADRKS 182 Query: 185 LTFSELLGEDFVGLSGDSALQQHLSGHATRAGKRLQYRVRLRSFDGICRMVEHQVGIAVM 244 +TF EL+ + + L + + + + A +L+ R+++ +F+ CRMVE +VGI +M Sbjct: 183 VTFHELIQYEQISLPEGTGMFEFIRKKAELVPSKLKIRIQVGNFETFCRMVEAKVGIGIM 242 Query: 245 PETAALAGAARMDIRAIPLSDGWSRRQLLICVRGLEGLPGPTRELILAL 293 P +AA + I L + WS R+L IC R + LPG T++L+ L Sbjct: 243 PHSAASRLRQLHEFSIIDLDEFWSLRKLQICARSFDKLPGFTQKLVTML 291 >PA0877 [K] COG0583 Transcriptional regulator Pae Pseudomonas aeruginosa Length = 298 Score = 229 bits (584), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 123/291 (42%), Positives = 182/291 (62%) Query: 5 FELSDLRLFLHIVESGSITAGAQRAHMALASASARIRNMEDALGTALLERGRRGVQSTDA 64 F+L+DLRLF+HI ES S+T GA+RA ++ A+ASAR++ +E LG+ LL R RGV+ T A Sbjct: 3 FDLADLRLFIHIAESPSLTQGARRAFLSPAAASARVKALEGQLGSRLLYRDSRGVELTPA 62 Query: 65 GRALAHHARMVAQQMEQMRDELGQYARGLKGHIRLLCNTSAMTEFLPEVLARFLAQHPYT 124 G+ L HAR++ +Q+E ++ E +Y GHIR+ NT+A+TEFLPE+LA FLA P Sbjct: 63 GQRLLQHARLIMRQVEYLKSEFTEYGSDAAGHIRIFANTTAVTEFLPEILAGFLAARPGV 122 Query: 125 DIELEEKLSYEVVQAVVDGVADIGIIADSTDSGPLQTYPFRQDHLVAVLSRKHPLARRKS 184 ++L+E+LS ++V+ V+DG D+GIIA + LQ F D LV + + HPLA + Sbjct: 123 TVDLQERLSRDIVRGVLDGSTDLGIIAGPVAASGLQVLHFSTDRLVMAVPQGHPLAGQAR 182 Query: 185 LTFSELLGEDFVGLSGDSALQQHLSGHATRAGKRLQYRVRLRSFDGICRMVEHQVGIAVM 244 + + L +GL + L L + G++L R+++ SF+ ICRM+E VGI V+ Sbjct: 183 VRLRDTLQFQHIGLPEGTTLHAFLYERVEQMGEQLSLRIQVSSFEAICRMIEGGVGIGVI 242 Query: 245 PETAALAGAARMDIRAIPLSDGWSRRQLLICVRGLEGLPGPTRELILALQR 295 P++AA + M + I L + W+ R+ + VR LE LP R LI LQR Sbjct: 243 PQSAARRHSRTMKLATIELDEPWAIRERSLLVRDLEALPSCLRALIEELQR 293 >mlr2195 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium loti Length = 397 Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 124/247 (50%), Positives = 165/247 (66%), Gaps = 1/247 (0%) Query: 4 RFELSDLRLFLHIVESGSITAGAQRAHMALASASARIRNMEDALGTALLERGRRGVQSTD 63 RF+L+DLRLFL + E GSIT GA+ A +ALASASARI+ ME+ LG LLER RRGV T Sbjct: 2 RFDLTDLRLFLLVAERGSITHGAELAGLALASASARIKGMEERLGAPLLERRRRGVVPTA 61 Query: 64 AGRALAHHARMVAQQMEQMRDELGQYARGLKGHIRLLCNTSAMTEFLPEVLARFLAQHPY 123 AG+AL HHAR V Q+E M +L YA GL+ +RL+ NT+A E L ++L FL HP Sbjct: 62 AGQALLHHARAVQNQIEAMAGDLRAYAGGLRARVRLMANTAATAELLRDILPAFLVAHPG 121 Query: 124 TDIELEEKLSYEVVQAVVDGVADIGIIADSTDSGPLQTYPFRQDHLVAVLSRKHP-LARR 182 DI+L+E+ S+E+ +AV G AD+GI A L+ PF D LV +L+R P LA R Sbjct: 122 IDIDLDERPSHEIAEAVASGAADLGIAATWAGLSHLEQKPFFIDRLVVILARNWPGLAGR 181 Query: 183 KSLTFSELLGEDFVGLSGDSALQQHLSGHATRAGKRLQYRVRLRSFDGICRMVEHQVGIA 242 S + +++LGE FVGLS ALQ+H++ A R G+ L R+R+ D +CR+V GIA Sbjct: 182 HSASLADMLGESFVGLSLGHALQEHINRQAARLGRHLHIRIRVPGLDNVCRLVAQGAGIA 241 Query: 243 VMPETAA 249 ++PE+AA Sbjct: 242 IVPESAA 248