BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2934.p (321 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1205 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransfe... 280 3e-75 PA3624 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransfer... 184 2e-46 VC0532 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransfer... 174 3e-43 YPO3357 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransfe... 170 3e-42 SMb20088_1 [O] COG2518 Protein-L-isoaspartate carboxylmethyltran... 165 2e-40 >RSc1205 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase Rso Ralstonia solanacearum Length = 321 Score = 280 bits (717), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 150/226 (66%), Positives = 171/226 (75%), Gaps = 15/226 (6%) Query: 111 SEAVRKAMVARVAKQGVADAKVLAALEAVPRHMFVEPGLASQAYIDASLPIGHHQTISQP 170 S+ R+A+VARV GV DA+VLAA+ VPRH+FV+ GLASQAY DA+LPIGH QTIS+P Sbjct: 96 SDRARQALVARVQAAGVTDARVLAAIGRVPRHLFVDAGLASQAYEDAALPIGHQQTISKP 155 Query: 171 YIVARMIELMRQNRH----------GGRLERVLEIGTGCGYQAAVLSRVAGEVYSIERIK 220 +V RMIEL+ + R L RVLEIGTGCGYQAAVLS+VAGEVYSIERI+ Sbjct: 156 SVVGRMIELLLRERPEPSAQAAQVPAQPLSRVLEIGTGCGYQAAVLSQVAGEVYSIERIR 215 Query: 221 PLHELAKTNLRPLRVANIRLHYGDGMLGLPQVAPFDGIILAAAGLEVPQALLEQLAIGGR 280 PLHE AK NLRPLRV NIRLHYGDGMLGLP+ APFD II+AAAGLEVPQALL+QLAIGGR Sbjct: 216 PLHEKAKANLRPLRVPNIRLHYGDGMLGLPKAAPFDAIIVAAAGLEVPQALLDQLAIGGR 275 Query: 281 LVAPV-----GERQQVLELIERVGQRDWRRTTLEQCHFVPLRPGTV 321 L+APV G Q L LIER G+ + T LE FVPL+ GTV Sbjct: 276 LIAPVATDRAGGPSQQLVLIERRGRFQFHSTALEGVFFVPLKSGTV 321 >PA3624 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase Pae Pseudomonas aeruginosa Length = 211 Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 99/213 (46%), Positives = 144/213 (67%), Gaps = 7/213 (3%) Query: 109 LASEAVRKAMVARVAKQGVADAKVLAALEAVPRHMFVEPGLASQAYIDASLPIGHHQTIS 168 + S+ R+ ++ R+ ++G+++A VL + PRH+FV+ L+ +AY D +LPIGH+QTIS Sbjct: 1 MTSQRTRERLIQRLYEEGLSNAHVLEVIRRTPRHLFVDEALSHRAYEDTALPIGHNQTIS 60 Query: 169 QPYIVARMIELMRQNRHGGRLERVLEIGTGCGYQAAVLSRVAGEVYSIERIKPLHELAKT 228 QP++VARM EL+ G L++V+EIGTG GYQ AVL+++ V+S+ERI+ L + AK Sbjct: 61 QPFMVARMTELLLA---AGPLDKVMEIGTGSGYQTAVLAQLVERVFSVERIQALQDKAKE 117 Query: 229 NLRPLRVANIRLHYGDGMLGLPQVAPFDGIILAAAGLEVPQALLEQLAIGGRLVAPV--G 286 L L + N+ +GDG G +AP++GII+ AA EVPQ+LL+QLA GGRLV PV G Sbjct: 118 RLAELNLRNVVFRWGDGWEGWSALAPYNGIIVTAAATEVPQSLLDQLAPGGRLVIPVGGG 177 Query: 287 ERQQVLELIERVGQRDWRRTTLEQCHFVPLRPG 319 E QQ++ LI R + + R L+ FVPL G Sbjct: 178 EVQQLM-LIVRT-EDGFSRQVLDSVRFVPLLNG 208 >VC0532 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase Vch Vibrio cholerae Length = 208 Score = 174 bits (441), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 94/204 (46%), Positives = 129/204 (63%), Gaps = 5/204 (2%) Query: 118 MVARVAKQGVADAKVLAALEAVPRHMFVEPGLASQAYIDASLPIGHHQTISQPYIVARMI 177 ++ + +QG+ +VLAA+ A+PR FV P + QAY + +LPIG QTISQPYIVA+M Sbjct: 9 LIQFLTEQGITSPQVLAAIHALPREFFVAPAMMHQAYDNNALPIGQGQTISQPYIVAKMT 68 Query: 178 ELMRQNRHGGRLERVLEIGTGCGYQAAVLSRVAGEVYSIERIKPLHELAKTNLRPLRVAN 237 EL+ +VLEIGTG GYQ AVL+++ V+++ERIK L AK L+ L + N Sbjct: 69 ELLALTPE----TKVLEIGTGSGYQTAVLAKLVNHVFTVERIKTLQWDAKRRLKQLDIYN 124 Query: 238 IRLHYGDGMLGLPQVAPFDGIILAAAGLEVPQALLEQLAIGGRLVAPVGERQQVLELIER 297 + +GDG G P PFD I++ AA +VPQ+LL+QLA GGR+V PVGE +Q L I R Sbjct: 125 VSTKHGDGWQGWPARGPFDAILVTAAAAKVPQSLLDQLAEGGRMVIPVGEDEQYLYKIVR 184 Query: 298 VGQRDWRRTTLEQCHFVPLRPGTV 321 G + + +E FVPL G + Sbjct: 185 QGGQ-FISERVEAVRFVPLVAGDL 207 >YPO3357 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase Ype Yersinia pestis Length = 208 Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 96/206 (46%), Positives = 131/206 (63%), Gaps = 5/206 (2%) Query: 116 KAMVARVAKQGVADAKVLAALEAVPRHMFVEPGLASQAYIDASLPIGHHQTISQPYIVAR 175 + ++ ++ +QG+ D ++L A+EAVPR FV+ LA +AY + +LPIG QTISQPY+VAR Sbjct: 7 QTLLMQLRQQGIHDERLLQAIEAVPRERFVDEALAHKAYENTALPIGAGQTISQPYMVAR 66 Query: 176 MIELMRQNRHGGRLERVLEIGTGCGYQAAVLSRVAGEVYSIERIKPLHELAKTNLRPLRV 235 M EL++ RVLEIGTG GYQ A+L+ + V S+ERIK L AK L+ L + Sbjct: 67 MTELLQLTP----TSRVLEIGTGSGYQTAILAHLVDHVCSVERIKGLQWQAKRRLKQLDL 122 Query: 236 ANIRLHYGDGMLGLPQVAPFDGIILAAAGLEVPQALLEQLAIGGRLVAPVGERQQVLELI 295 N+ +GDG LG PFD II+ AA E+P ALLEQL GG LV PVGE+ Q L+ + Sbjct: 123 HNVSTRHGDGWLGWQSRGPFDAIIVTAAPPEIPDALLEQLDEGGILVLPVGEQFQTLKYV 182 Query: 296 ERVGQRDWRRTTLEQCHFVPLRPGTV 321 +R ++ T+E FVPL G + Sbjct: 183 QR-RNNEYHIETVEAVRFVPLVKGEL 207 >SMb20088_1 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase Sme Sinorhizobium meliloti Length = 213 Score = 165 bits (417), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 97/208 (46%), Positives = 127/208 (61%), Gaps = 7/208 (3%) Query: 111 SEAVRKAMVARVAKQGVADAKVLAALEAVPRHMFVEPGLASQAYIDASLPIGHHQTISQP 170 S A + + + ++++G+ D V+ A+ VPR FV+PG AY D++L I H QTISQP Sbjct: 5 SRARERMITSHLSRRGIRDRHVVEAMGVVPREAFVDPGFEEFAYEDSALSISHGQTISQP 64 Query: 171 YIVARMIELMRQNRHGGRLERVLEIGTGCGYQAAVLSRVAGEVYSIERIKPLHELAKTNL 230 YIVA MIE R G + VLEIGTG GY AAVLSR+A VY+IER L E+A+ Sbjct: 65 YIVALMIE--RAEVQPG--DTVLEIGTGSGYAAAVLSRIAAYVYTIERHAGLAEVAERRF 120 Query: 231 RPLRVANIRLHYGDGMLGLPQVAPFDGIILAAAGLEVPQALLEQLAIGGRLVAPVG--ER 288 LR NI + GDG G P+ PFD I++AA G E+P AL EQL +GG LV PVG E Sbjct: 121 AELRYGNIDVRVGDGTAGWPEAGPFDAILVAAGGPEIPHALKEQLDLGGHLVIPVGPPEE 180 Query: 289 QQVLELIERVGQRDWRRTTLEQCHFVPL 316 Q++++ + RV + L FVPL Sbjct: 181 QRLMK-VTRVNATTFEEQDLGGVRFVPL 207