BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2909.p (1952 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value all5100 [R] COG2373 Large extracellular alpha-helical protein No... 169 8e-41 yfaS+R [R] COG2373 Large extracellular alpha-helical protein Eco... 99 1e-19 ECs3111 [R] COG2373 Large extracellular alpha-helical protein Ec... 98 2e-19 Z3481 [R] COG2373 Large extracellular alpha-helical protein EcZ ... 98 2e-19 PA4489 [R] COG2373 Large extracellular alpha-helical protein Pae... 96 9e-19 >all5100 [R] COG2373 Large extracellular alpha-helical protein Nos Nostoc sp. PCC 7120 Length = 1906 Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 339/1519 (22%), Positives = 573/1519 (37%), Gaps = 212/1519 (13%) Query: 520 VTNLSVHVKLGRANGAVWVTRLDDAKPVADAEIRV--------SNCDGTQLWQGKTNANG 571 +TNL V + +G + V L D PV A I + S + GKT+ NG Sbjct: 507 LTNLGVFSQWFPESGLIRVNHLTDGAPVKAAVIEIYQSKLQAKSRPEPVPCATGKTDENG 566 Query: 572 VAMMPALEDACLNRGYSADNAAKINGLFVSARKTDEKGRQDMAFALTS-----WNEGIES 626 + +A + N+ K L V A + ++D AF T + GI++ Sbjct: 567 TFRVN--REALQQCTAGSQNSIKSPELLVIASE-----KEDWAFTRTEEYSGVYGYGIDA 619 Query: 627 -WRFNLPTDMDKSATTRATTIFDRTLLRAGETVSMKHVIRTETLQGFGLVRKEDLPTRIR 685 W+ N P +R DR L ++GE + LQ G++ ++D + Sbjct: 620 GWQGNKPE-------SRGVIFSDRQLYQSGEKAWFTGF--ADYLQN-GVI-QQDKNADYQ 668 Query: 686 ISHLGSGQQYQFPLTWRGNKSAETSFTLP--KEAKLGTYEVVLDQGRVNANASEQTGDDE 743 I+ + Q T N+ S +P K LG Y + + G + Sbjct: 669 ITLVNPDGQKTSLGTQTTNEFGTFSLEMPINKTQGLGYYTI------------QAKGKN- 715 Query: 744 DSYGRGTYVTGTFRVEEFRLPLMQGRITPPKGAQVAIKELPLDLQLNYINGGAAANQTVQ 803 G ++G FRV EF+ P + + K ++ ++ NY+ G + Sbjct: 716 -----GLEISGEFRVAEFKPPNFKVEVKLDKEFAYIGDDVDINATSNYLFGAPVEGGEAK 770 Query: 804 VSSLLRSRSLDMAGYDGFSF--------EAPRSDDDSNADDQKIVADKLAVTLDKNGAGR 855 + + G++ F+F EAP D + + LD N Sbjct: 771 YFITRQQANFIPKGWEEFTFGRQWFWPEEAPTISSDVLQSNSQ---------LDGNDKSS 821 Query: 856 AIIGKLPALQRPQELLTEMTYSD-PNGEVQTISTVTPLWPSAVVVGLRTGNWVSVKKKLT 914 ++ L P ++ +D N V + T L PS ++GL++ K Sbjct: 822 QMVNVAKDLPYPMTYRVDVQVADVSNLSVANSQSFTAL-PSNRLIGLKSNFIADAGKAFP 880 Query: 915 LTAVTLNTAGQPQAGVPVEIRGLARQTNSHRKRMVGGFYAYENDESKQDLGK--LCSGKS 972 + + + G+ G V + L + S ++V G +N + + + + S + Sbjct: 881 IEVIIADPTGKLITGQRVRLE-LQQIKYSSVTQLVEGSQTPKNQVEYKTVAQTEITSTSN 939 Query: 973 DQHGMFTCDTELSEAGNVDLIATAKDGNGNAAAARSSVWVTGRGEVWFDGENQDRIDILP 1032 Q T E+G + D A S +WVTG V++ ++D +++ Sbjct: 940 PQSVNLTP----PESGTYRIRVNFSDAKNELGATDSQIWVTGGNAVFWGTRDKDVLEVKL 995 Query: 1033 EKKNYQPGETASFQVRMPFRHATALVAVEREGVIDTRVVSLSGQDPTISVPMKAEYGPNV 1092 +KK Y+ GETA+ ++ P+ A AV ++ I ++ + G P I + E PN Sbjct: 996 DKKEYKAGETATALIQSPYADAELYFAVIKDKPIYQQITKVQGSAPQIQFRVTPEMLPNA 1055 Query: 1093 YVSVLAVRGRMREVPWYSFFIWGWKEPINWWHEFREYQGPGPIVDLSKPAWKFGIAEVNV 1152 V + VR +PIN G + +L K F +VN+ Sbjct: 1056 AVEAVLVRQ---------------GKPINQVEV-------GSLDNLVKIG--FTPFKVNL 1091 Query: 1153 GDAGHRLQVAVSTDKPSYPIRAVAKVQVQVKLPNGKPAAGGEFALAAVDEALLELQPNGS 1212 D +LQV + + S A +Q++VK G P G + + V+EA+L+L Sbjct: 1092 EDKYLKLQVKPA--QASLEPGAEETIQLEVKDNQGNPTKG-QLTVMVVNEAVLQLSGYRP 1148 Query: 1213 WDVLRAMLQRRSYGVETSTAQMQVVGKRHYGKKATPAGGGGGRAP------TRELFDTLL 1266 +++ + + + + V+ + K G GGG + TR F L Sbjct: 1149 PNLVDTVYAEQPISTRFTDNRPDVILQPQDVAKPKGWGYGGGFSTGAANTRTRTDFQPLA 1208 Query: 1267 LWKPSVTLDAEGRAQLEVPLNDALTSFRIVAIAENGIGDFGTGSISIRSTQDVQLISGLP 1326 + SV DA G AQ+ V L D LT++R++A+A +G FG G + +T+ + + LP Sbjct: 1209 YYNGSVLTDASGNAQITVKLPDDLTTWRVMAVATDGNLRFGNGDATFITTKPLLSNAILP 1268 Query: 1327 PLVREGDHFNGTVTVRNTTTHDMNIKVTARAQGSTTASTLTLPEREVKIASGQAAEVMWP 1386 VR GD ++V N T + N+ + G+ VK S Sbjct: 1269 QFVRPGDRILAGLSVTNNTGNTGNLSINGEISGA------------VKFNSKNPTTTTLQ 1316 Query: 1387 VQTPEGISQLAWDISAQEQGGQKAR---------DAMKFTQRVVPAVPVTVQQATLFQLD 1437 Q + + A G K R DA + +V P + +T Q Sbjct: 1317 TQAESATQAYRFPMVADSVGVGKVRFTTQLNGTADAFELPLQVKP-LEITEQIVETGVSQ 1375 Query: 1438 KSAAINVARPADSLPGRGGLAVALKPSLAGGSDALTRYFV---NYPFA------------ 1482 K I + ++ P GGL + L +L A + + + PF Sbjct: 1376 KQIKIPLNVDKNTFPEAGGLDIQLASTLIPEIKAPAKQVLTDNDLPFTEPSASQLIIATN 1435 Query: 1483 --CLEQKTSKAIGLRDEAAWQKIAAD-LPTYLDGDGLAYYFPPSDSGARRGSDTLTAYLL 1539 + QK + + +A + L DG FP G + ++AY + Sbjct: 1436 LQTIAQKYGQTFAEFNSRQQANLAVEKLQKLQISDGGFAAFP----GQEKSDPWVSAYSV 1491 Query: 1540 AATNEAGYAIPQASRDKMLDGLAAFVEGKVM-----REFWSPQKDLDVRKLAALEALSRY 1594 + +A P ML L +++ KV+ +F Q +L AL ALS Sbjct: 1492 ESLVKASQVFPNLVDTGMLSRLKTYLQ-KVLANPGEYDFCKQQLCKRQLQLNALIALSEL 1550 Query: 1595 NRVQPAMLGSLQINPNSWPTSGLLDWIAILQRVNTLPERQKKLDEADQIL-RARLNFQGT 1653 + L + N++ L+ I + + ++ PE Q DE+ Q++ + + N T Sbjct: 1551 GDKRNTFLTDIYEQRNNF---DLVTQIKLARYLSQFPEWQ---DESQQLVNKLQQNISET 1604 Query: 1654 RMGFSNEEGDYWWWLMS--SADANANRLILLELNNPAWRDDLPRLVAGAIGRQQRGHWST 1711 W W+ S +A A A RL + + + P D +L+ + ++ G W T Sbjct: 1605 GRTAVVSLPPSWGWMSSPTTAQAQALRLFIAKQSKPEIID---KLLQSLLALRRDGTWQT 1661 Query: 1712 TTANVWGSLALEKFARKFESEP-VTGTTRVTLEQGGATSTTQSLAWSGAANGGKLQLPWP 1770 N AL ++ + + P T ++ + G ++G N LQL P Sbjct: 1662 DYNNAQALTALVEYGQLQPTPPNFVATVQLAGRKLGENR------FTGYKNPS-LQLSVP 1714 Query: 1771 QDHAQAG--SVRFAQEGNGKPWVTLQSLAAVPL----TQP-FAAGYRITRKVEAIEQK-- 1821 + G + + GNG TL L A QP G RITR++ + K Sbjct: 1715 MNQLPRGRHDLTLQKSGNG----TLHYLVAYNYRLQGNQPGRFNGLRITREISQVNAKRI 1770 Query: 1822 --QAGVYTR--------GDVLRVTLDIDAQAEMTWVVVSDPVPGGATLLGSGLGRDSTIA 1871 + G+Y G V + L+I + +V+ DP+P G + + + Sbjct: 1771 LRKTGIYALDQPLTLALGQVFDIGLEIIVDRPVDHLVIKDPLPAGLEAVDASFQTTTAAL 1830 Query: 1872 QGKQDAPRDRGMGW-LAYEERSFEAYRAYYEAMPKGRTSISYTVRLNNAGEFNLPPTRVE 1930 Q K D+ W L + + AY + + G S+ Y VR G F+ P V Sbjct: 1831 QAKADS-------WELGFRNIYSDRIIAYADHLEPGVYSLHYLVRSVTPGTFSWPGAEVH 1883 Query: 1931 AMYAPEMFGEIPNGKLVVK 1949 YAPE FG KL+V+ Sbjct: 1884 LQYAPEEFGRTAEMKLIVE 1902 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/209 (24%), Positives = 82/209 (39%), Gaps = 16/209 (7%) Query: 52 FSPQGEVQRIRQVRARFSESMV---KFGDP---KAASPFDADCAVAGTARWADDKNWVYD 105 SP GE Q + Q+R RF E+++ P + F + G R+ + + Sbjct: 52 ISPIGEAQPLNQIRIRFKEALIPVESLDSPEQQQLLQKFALWPPLPGQFRFLTPRMVGFQ 111 Query: 106 FERDLPPGTRCSFNLRADAKSVAGNAMSGKTRFQFSTGG------PAVTRIEPYHGAQIA 159 ++ LP TR L+A + + + + F+T P V IE I Sbjct: 112 ADKALPIATRLQVTLKAGLADLKNHRLDKDLSWTFNTQSINLTNLPGVNPIEKADAEPID 171 Query: 160 EDQAFILFQNGPATEASVREHLYCEAEGINERIPTKAVGQADRKAL-LQQFAKGVDPAA- 217 N ASV+EHL EG NE + + + K L ++ K DP+A Sbjct: 172 LQPKLQFTSNVELDLASVQEHLQLIPEGKNEGLRFQVTLNKEEKPLDKEEPLKKFDPSAR 231 Query: 218 --VSIVQCQQRLPNEAHVKLVWDRGIAAA 244 + ++ Q+ L +LV+ GI A Sbjct: 232 NWIYNLRPQKNLKTATRYRLVFSPGIRPA 260 >yfaS+R [R] COG2373 Large extracellular alpha-helical protein Eco Escherichia coli K12 Length = 1504 Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 172/716 (24%), Positives = 276/716 (38%), Gaps = 142/716 (19%) Query: 641 TRATTIFDRTLLRAGETVSMKHVIRT--ETLQGFGLVRKEDLPTRIRISHLGSGQQYQFP 698 TR DR L RAG+ V +K + R + L +V P ++ + Sbjct: 313 TRLYIFTDRPLYRAGDRVDVKVIGREFHDPLHSSPIVSA---PAKLSVLDANGSLLQTVN 369 Query: 699 LTWRGNKSAETSFTLPKEAKLGTYEVVLDQGRVNANASEQTGDDEDSYGRGTYVTGTFRV 758 +T + SF LP+ A G YE+ L +Y Y + +FRV Sbjct: 370 VTLDARNGGQGSFRLPENAVAGGYELRL------------------AYRNQVY-SSSFRV 410 Query: 759 EEFRLPLMQGRITPPKGAQVAIKELPLDLQLNYINGGAAANQTVQVSSLLRSRSLDMAGY 818 + P + + K + + LQL Y +G N VQ+S LR++ L M G Sbjct: 411 ANYIKPHFEIGLALAKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLS--LRAQQLSMVGN 468 Query: 819 D-GFSFEAPRSDDDSNADDQKIVADKLAVTLDKNGAGRAIIGKLPALQRPQELLTEMTYS 877 D ++ P S + S + V+D A + LPA +P L ++ S Sbjct: 469 DLRYAGRFPVSLEGS-----ETVSD----------ASGHVALNLPAADKPSRYLLTVSAS 513 Query: 878 DPNGEVQTISTVTPLWPSAVVVGLRTGNWVSVKKKLTLTAVTLNTAGQ-PQAGVPVEIRG 936 D G ++T + + L +L+TA Q +G V R Sbjct: 514 D--GAAYRVTTTK-----------------EILIERGLAHYSLSTAAQYSNSGESVVFRY 554 Query: 937 LARQTNSHRKRMVGGFYAYENDESKQDLGKLCSGKSDQHGMFTCDTELSEAGNVDLIATA 996 A +++ K++ + ++ G+L SG FT + ++ GN +L Sbjct: 555 AALESS---KQVPVTYEWLRLEDRTSHSGELPSGGKS----FTVN--FAKPGNYNLTLRD 605 Query: 997 KDGNGNAAAARSSVWVTGRGEVWFDGENQDRIDILPEKKNYQPGETASFQVRMPFRHATA 1056 KDG A + + V+G+G G +DI+ +K YQPGETA + P A Sbjct: 606 KDGLILAGLSHA---VSGKGSTAHTGT----VDIVADKTLYQPGETAKMLITFPEPIDEA 658 Query: 1057 LVAVEREGVIDTRVVS----------LSGQDPTISVPMKAEYGPNVYVSVLAVRGRMREV 1106 L+ +ER+ V ++S L+ VP+ + PN+ SVL R Sbjct: 659 LLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQ--- 715 Query: 1107 PWYSFFIWGWKEPINWWHEFREYQGPGPIVDLSKPAWKFGIAEVNVGDAGHRLQVAVSTD 1166 YSF Q G + ++ P +L + V TD Sbjct: 716 --YSF------------------QNAG--IKVAVP----------------QLDIRVKTD 737 Query: 1167 KPSYPIRAVAKVQVQVKLPNGKPAAGGEFALAAVDEALLELQPNGSWDVLRAMLQRRSYG 1226 K Y + V++ L GKP + + + VDE + LQP + ++ + Sbjct: 738 KTHYQPGELVNVELTSSL-KGKPVS-AQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNN 795 Query: 1227 VETSTAQMQVVGKRHYGKKATPAGGGGGRA---------PTRELFDTLLLWKPSVTLDAE 1277 V TS++ + + A G R+ P RE DT W PS+T D + Sbjct: 796 VRTSSS-LSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDT-AAWMPSLTTDKQ 853 Query: 1278 GRAQLEVPLNDALTSFRIVAIAENGIGDFGTGSISIRSTQDVQLISGLPPLVREGD 1333 G+A + D+LT +RI A NG G G G +RS +++ + +P + R GD Sbjct: 854 GKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGD 909 >ECs3111 [R] COG2373 Large extracellular alpha-helical protein Ecs Escherichia coli O157:H7 Length = 1534 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 180/751 (23%), Positives = 290/751 (38%), Gaps = 143/751 (19%) Query: 641 TRATTIFDRTLLRAGETVSMKHVIRT--ETLQGFGLVRKEDLPTRIRISHLGSGQQYQFP 698 TR DR L RAG+ V +K + R + L +V P ++ + Sbjct: 343 TRLYIFTDRPLYRAGDRVDVKVMGREFHDPLHSSPIVSA---PAKLSVLDANGSLLQTVD 399 Query: 699 LTWRGNKSAETSFTLPKEAKLGTYEVVLDQGRVNANASEQTGDDEDSYGRGTYVTGTFRV 758 +T + SF LP+ A G YE+ L +Y Y + +FRV Sbjct: 400 VTLDARNGGQGSFRLPENAVAGGYELRL------------------AYRNQVY-SSSFRV 440 Query: 759 EEFRLPLMQGRITPPKGAQVAIKELPLDLQLNYINGGAAANQTVQVSSLLRSRSLDMAGY 818 + P + + K + + LQL Y +G N VQ+S LR++ L M G Sbjct: 441 ANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLS--LRAQQLSMVGN 498 Query: 819 D-GFSFEAPRSDDDSNADDQKIVADKLAVTLDKNGAGRAIIGKLPALQRPQELLTEMTYS 877 D ++ P S + S + V+D A + LPA +P L ++ S Sbjct: 499 DLRYAGRFPVSLEGS-----ETVSD----------ASGHVALNLPAADKPSRYLLTVSAS 543 Query: 878 DPNGEVQTISTVTPLWPSAVVVGLRTGNWVSVKKKLTLTAVTLNTAGQ-PQAGVPVEIRG 936 D G ++T + + L +L+TA Q +G V R Sbjct: 544 D--GAAYRVTTTK-----------------EILIERGLAHYSLSTAAQYSNSGESVVFRY 584 Query: 937 LARQTNSHRKRMVGGFYAYENDESKQDLGKLCSGKSDQHGMFTCDTELSEAGNVDLIATA 996 A +++ K++ + ++ G L SG FT + + GN +L Sbjct: 585 AALESS---KQVPVTYEWLRLEDRTSHSGDLPSGGKS----FTVN--FDKPGNYNLTLRD 635 Query: 997 KDGNGNAAAARSSVWVTGRGEVWFDGENQDRIDILPEKKNYQPGETASFQVRMPFRHATA 1056 KDG A + + V+G+G + G +DI+ +K YQPGETA + P A Sbjct: 636 KDGLILAGLSHA---VSGKGSMSHTGT----VDIVADKTLYQPGETAKMLITFPEPIDEA 688 Query: 1057 LVAVEREGVIDTRVVS----------LSGQDPTISVPMKAEYGPNVYVSVLAVRGRMREV 1106 L+ +ER+ V ++S L+ VP+ + PN+ SVL R Sbjct: 689 LLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQ--- 745 Query: 1107 PWYSFFIWGWKEPINWWHEFREYQGPGPIVDLSKPAWKFGIAEVNVGDAGHRLQVAVSTD 1166 YSF Q G + ++ P +L + V TD Sbjct: 746 --YSF------------------QNAG--IKVAVP----------------QLDIRVKTD 767 Query: 1167 KPSYPIRAVAKVQVQVKLPNGKPAAGGEFALAAVDEALLELQPNGSWDVLRAMLQRRSYG 1226 K Y + V++ L GKP + + + VDE + LQP + ++ + Sbjct: 768 KTHYQPGELVNVELTSSL-KGKPVSA-QLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNN 825 Query: 1227 VETSTAQMQVVGKRHYGKKATPAGGGGGRA---------PTRELFDTLLLWKPSVTLDAE 1277 V TS++ + + A G R+ P RE DT W PS+T D + Sbjct: 826 VRTSSS-LSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAA-WMPSLTTDKQ 883 Query: 1278 GRAQLEVPLNDALTSFRIVAIAENGIGDFGTGSISIRSTQDVQLISGLPPLVREGDHFNG 1337 G+A + D+LT +RI A NG G G G +RS +++ + +P + R GD + Sbjct: 884 GKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPSA 943 Query: 1338 TVTVRNTTTHDMNIKVTARAQGSTTASTLTL 1368 + + + ++ VT A G+ TLTL Sbjct: 944 GLFIFSQQDNEPVALVTKFA-GAEMRQTLTL 973 >Z3481 [R] COG2373 Large extracellular alpha-helical protein EcZ Escherichia coli O157:H7 EDL933 Length = 1534 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 180/751 (23%), Positives = 290/751 (38%), Gaps = 143/751 (19%) Query: 641 TRATTIFDRTLLRAGETVSMKHVIRT--ETLQGFGLVRKEDLPTRIRISHLGSGQQYQFP 698 TR DR L RAG+ V +K + R + L +V P ++ + Sbjct: 343 TRLYIFTDRPLYRAGDRVDVKVMGREFHDPLHSSPIVSA---PAKLSVLDANGSLLQTVD 399 Query: 699 LTWRGNKSAETSFTLPKEAKLGTYEVVLDQGRVNANASEQTGDDEDSYGRGTYVTGTFRV 758 +T + SF LP+ A G YE+ L +Y Y + +FRV Sbjct: 400 VTLDARNGGQGSFRLPENAVAGGYELRL------------------AYRNQVY-SSSFRV 440 Query: 759 EEFRLPLMQGRITPPKGAQVAIKELPLDLQLNYINGGAAANQTVQVSSLLRSRSLDMAGY 818 + P + + K + + LQL Y +G N VQ+S LR++ L M G Sbjct: 441 ANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLS--LRAQQLSMVGN 498 Query: 819 D-GFSFEAPRSDDDSNADDQKIVADKLAVTLDKNGAGRAIIGKLPALQRPQELLTEMTYS 877 D ++ P S + S + V+D A + LPA +P L ++ S Sbjct: 499 DLRYAGRFPVSLEGS-----ETVSD----------ASGHVALNLPAADKPSRYLLTVSAS 543 Query: 878 DPNGEVQTISTVTPLWPSAVVVGLRTGNWVSVKKKLTLTAVTLNTAGQ-PQAGVPVEIRG 936 D G ++T + + L +L+TA Q +G V R Sbjct: 544 D--GAAYRVTTTK-----------------EILIERGLAHYSLSTAAQYSNSGESVVFRY 584 Query: 937 LARQTNSHRKRMVGGFYAYENDESKQDLGKLCSGKSDQHGMFTCDTELSEAGNVDLIATA 996 A +++ K++ + ++ G L SG FT + + GN +L Sbjct: 585 AALESS---KQVPVTYEWLRLEDRTSHSGDLPSGGKS----FTVN--FDKPGNYNLTLRD 635 Query: 997 KDGNGNAAAARSSVWVTGRGEVWFDGENQDRIDILPEKKNYQPGETASFQVRMPFRHATA 1056 KDG A + + V+G+G + G +DI+ +K YQPGETA + P A Sbjct: 636 KDGLILAGLSHA---VSGKGSMSHTGT----VDIVADKTLYQPGETAKMLITFPEPIDEA 688 Query: 1057 LVAVEREGVIDTRVVS----------LSGQDPTISVPMKAEYGPNVYVSVLAVRGRMREV 1106 L+ +ER+ V ++S L+ VP+ + PN+ SVL R Sbjct: 689 LLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQ--- 745 Query: 1107 PWYSFFIWGWKEPINWWHEFREYQGPGPIVDLSKPAWKFGIAEVNVGDAGHRLQVAVSTD 1166 YSF Q G + ++ P +L + V TD Sbjct: 746 --YSF------------------QNAG--IKVAVP----------------QLDIRVKTD 767 Query: 1167 KPSYPIRAVAKVQVQVKLPNGKPAAGGEFALAAVDEALLELQPNGSWDVLRAMLQRRSYG 1226 K Y + V++ L GKP + + + VDE + LQP + ++ + Sbjct: 768 KTHYQPGELVNVELTSSL-KGKPVSA-QLTVXVVDEMIYALQPEIAPNIGKFFYPLGRNN 825 Query: 1227 VETSTAQMQVVGKRHYGKKATPAGGGGGRA---------PTRELFDTLLLWKPSVTLDAE 1277 V TS++ + + A G R+ P RE DT W PS+T D + Sbjct: 826 VRTSSS-LSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAA-WMPSLTTDKQ 883 Query: 1278 GRAQLEVPLNDALTSFRIVAIAENGIGDFGTGSISIRSTQDVQLISGLPPLVREGDHFNG 1337 G+A + D+LT +RI A NG G G G +RS +++ + +P + R GD + Sbjct: 884 GKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPSA 943 Query: 1338 TVTVRNTTTHDMNIKVTARAQGSTTASTLTL 1368 + + + ++ VT A G+ TLTL Sbjct: 944 GLFIFSQQDNEPVALVTKFA-GAEMRQTLTL 973 >PA4489 [R] COG2373 Large extracellular alpha-helical protein Pae Pseudomonas aeruginosa Length = 1516 Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 234/1039 (22%), Positives = 389/1039 (37%), Gaps = 211/1039 (20%) Query: 482 IGIPLKD--PGFYVVELASQKLGASLLGKPQPMYVRTSALVTNLSVHV-KLGRANGAVWV 538 + IPL PG Y+VE +L+GK Y T+ + + SV V K+ VW Sbjct: 214 VYIPLGKLKPGLYLVE--------ALVGK----YRATTVVFVSNSVAVSKVAGDELLVWT 261 Query: 539 TRLDDAKPVADAEIRVSNCDGTQLWQGKTNANGVAMMPALEDACLNRGYSADNAAKINGL 598 R + PV D ++ ++ G + G T+A+G+ L+ A R Y + G+ Sbjct: 262 ARKHEGTPVPDTKVLWTDGLGV-MSSGNTDADGLLR---LKHASPERSYVI-GEDREGGV 316 Query: 599 FVSARKTDEKGRQDMAFALTSWNEGIESWRFNLPTDMDKSATTRATTIFDRTLLRAGETV 658 FVS E++ ++ + T+ DR L R G+ V Sbjct: 317 FVS-----------------------ENFYYD-----SEIYDTKIYAFTDRPLYRPGDWV 348 Query: 659 SMKHVIRTETLQGFGLVRKEDLPTRIRISHLGSGQQYQFPLTWRGNKSAETSFTLPKEAK 718 S+K V R E P R+ + L + A F LP+ A Sbjct: 349 SLKMVGR-EFKDARQSQAAASAPVRLSVIDASGTVLQSLDLRFDAKSGANGRFQLPENAV 407 Query: 719 LGTYEVVLDQGRVNANASEQTGDDEDSYGRGTYVTGTFRVEEFRLPLMQGRITPPKGAQV 778 G YE+ D RG + FRV E+ P + + K Sbjct: 408 AGGYELRFDY-------------------RGQTYSSAFRVAEYIKPHFEVALDLAKPDFK 448 Query: 779 AIKELPLDLQLNYINGGAAANQTVQVSSLLRSRSLDMAGYDGFSFEAPRSDDDSNADDQK 838 + + ++ L Y +G AN +Q+S LR++ L M D+ + Sbjct: 449 TAEPVKGEIVLLYPDGKPVANARLQLS--LRAQQLSMV-------------DNELQYLGQ 493 Query: 839 IVADKLAVTLDKNGAGRAIIGKLPALQRPQELLTEMTYSDPNGEVQTISTVTPLWPSAVV 898 + + L +G GRA I +LP ++P + + SD Sbjct: 494 FPVELSSTELTTDGKGRAAI-ELPPAEKPSRYMLTIFASD-----------------GAA 535 Query: 899 VGLRTGNWVSVKK---KLTLTAVTLNTAGQPQAGVPVEIRGLARQTNSHRKRMVGGFYAY 955 ++T + +++ + L+A +A AG VE + Q + + Sbjct: 536 YRVKTSKEILIERGAARYRLSAPQRFSA----AGEKVEFSYASEQPTPLKP---SSYQWI 588 Query: 956 ENDESKQDLGKLCSGKSDQHGMFTCDTELSEAGNVDLIATAKDGNGNAAAARSSVWVTGR 1015 ++ D G + G+ F E +V+L +D G A V+G Sbjct: 589 RLEDRATDSGPVADGR------FALTFERPGTYSVEL----RDDKGQLLGATGHS-VSGE 637 Query: 1016 GEVWFDGENQDRIDILPEKKNYQPGETASFQVRMPFRHATALVAVEREGVIDTRVVS--- 1072 G G ++++ +K Y+ GE AS + P AL+++ER+ V T ++S Sbjct: 638 GVKSVPGT----VEVVFDKPEYRTGEEASALITFPEPVEDALLSLERDKVEATALLSKGA 693 Query: 1073 ----LSGQDPT---ISVPMKAEYGPNVYVSVLAVRGRMREVPWYSFFIWGWKEPINWWHE 1125 L +PT + +P++ E+ PN+ SVL +G YSF Sbjct: 694 DWLRLEKLNPTQYRVWIPVREEFSPNLTFSVLYTKGGD-----YSF-------------- 734 Query: 1126 FREYQGPGPIVDLSKPAWKFGIAEVNVGDAGHRLQVAVSTDKPSYPIRAVAKVQVQVKLP 1185 Q G K G+ +V ++ ++TDK Y V + + Sbjct: 735 ----QNAG---------IKVGMPQV---------EIDIATDKERYEPGETVTVTLATRF- 771 Query: 1186 NGKPAAGGEFALAAVDEALLELQPNGSWDVLRAMLQRRSYGVETSTAQMQVVGKRHYGKK 1245 GKP + ++ VDE + LQ + + + R V TS A + + Sbjct: 772 AGKPVSS-HLTVSVVDEMVYALQAEIAPGIDQFFYHPRRNNVRTS-ASLAFISYDVALPG 829 Query: 1246 ATPAGGGGGRA---------PTRELFDTLLLWKPSVTLDAEGRAQLEVPLNDALTSFRIV 1296 +T A G R+ P RE DT W+P + DA+G+A + D+LT +RI Sbjct: 830 STSAPGRANRSERGVKVLERPRREDVDTAA-WQPELVTDAQGKASFSFRMPDSLTRWRIT 888 Query: 1297 AIAENGIGDFGTGSISIRSTQDVQLISGLPPLVREGDHFNGTVTVRNTTTHDMNIKVTAR 1356 A A + G G +RS + + L P R+GD + + V N + ++ + Sbjct: 889 ARAIDDNGQVGQKKQFLRSEKPLYLKWSGPTRFRQGDQPDLGLFVFNQGEQPVKAELLSG 948 Query: 1357 AQGSTTASTLTLPEREVKIASGQAAEVMWPVQTPEGISQLAWDISAQEQGGQKARDAMKF 1416 GS + TL L + I Q + +S W ++ G + R A++F Sbjct: 949 PPGSQRSQTLELAKGVNYIPLAQ-----------QPLSDGDWSAELRQDGQVRDRLAVRF 997 Query: 1417 TQRVVPAVPVTVQQATLFQLDKSAAIN-VARPADSLPGRGGLAVALKPSLAGGSDALTRY 1475 + A V+Q + L +AA N + PAD+ R LA + G D L Sbjct: 998 N---LLADGWQVEQ--MQNLSLAAASNPLQLPADARDVRLRLADGPAAAYLGNLDDL--- 1049 Query: 1476 FVNYPFACLEQKTSKAIGL 1494 + YP+ +EQ S+ + L Sbjct: 1050 -LEYPYGGVEQTASQLLPL 1067 Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 78/203 (38%), Gaps = 37/203 (18%) Query: 1763 GKLQLP---WPQDHAQAGSVRFAQEGNGKP-WVTLQSLAAVPLTQPFAAGYR-------- 1810 GKL P W +G + G G P WV L A PL P A YR Sbjct: 1306 GKLPQPPKDWQAQRGASGETYWQWRGRGIPSWVDLDEAPARPL--PVALSYRSAQAPSGQ 1363 Query: 1811 ----ITRKV-------EAIEQKQAGVYTR---GDVL---RVTLDIDAQAEMTWVVVSDPV 1853 I+R++ A E K V + D L VTL++ + + ++ P+ Sbjct: 1364 LPVQISRRLLRLVPGEGAFEFKVEEVGDKPLSSDELYLDEVTLNVPEDTALRYGMLELPL 1423 Query: 1854 PGGATLLGSGLGRDSTIAQGKQDAPRDRGMGWLAYEERSFEAYRAYYEAMPKGRTSISYT 1913 P GA + + G + G + +R A E Y +++ G + Sbjct: 1424 PPGADVERTTWGIKISGLAGDEATTLER-----ARNEPGELFYGVPVDSL-SGEQRFRHL 1477 Query: 1914 VRLNNAGEFNLPPTRVEAMYAPE 1936 VR + G FNLPP R +YAPE Sbjct: 1478 VRFSQKGSFNLPPARYLRLYAPE 1500