BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2907.p (243 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0017 [E] COG0410 ABC-type branched-chain amino acid transport... 340 2e-93 TM1139 [E] COG0410 ABC-type branched-chain amino acid transport ... 280 2e-75 SP0753 [E] COG0410 ABC-type branched-chain amino acid transport ... 255 5e-68 FN1428 [E] COG0410 ABC-type branched-chain amino acid transport ... 254 8e-68 DR2118 [E] COG0410 ABC-type branched-chain amino acid transport ... 247 1e-65 >RSp0017 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 241 Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 170/238 (71%), Positives = 203/238 (85%), Gaps = 4/238 (1%) Query: 10 ILQVEDLAVAYGHIEAVKGISLSLNEGEITALVGANGAGKSTSLLAISGLV-KAQ---RG 65 +L+V+ L V+YGHI AVKGI +LN GEIT+LVGANGAGKST+LLA+SGL+ K+Q RG Sbjct: 4 LLEVKGLEVSYGHIAAVKGIDFALNAGEITSLVGANGAGKSTTLLALSGLIPKSQGEVRG 63 Query: 66 RVLLNGQDLLQMSPHRIVESGVVQVAEGRATLTTLTVEENLALGAYTRKDKDGVARDLEW 125 ++L G D+ Q S H+ VE G+VQVAEGRATLTT+TV ENL LGAYTRKD+ +A DLE Sbjct: 64 QILFEGADVTQWSAHKRVERGIVQVAEGRATLTTMTVRENLELGAYTRKDRSQIASDLER 123 Query: 126 VYSIFPRLKHRATGLAGNLSGGEQQMLAIGRALMAKPKVLLLDEPSMGLAPLIIQEIFRI 185 V+ +FPRLK R G+AGNLSGGEQQMLAIGRALMA+P+VLLLDEPSMGLAP+I+QEIFRI Sbjct: 124 VFHLFPRLKERIDGMAGNLSGGEQQMLAIGRALMARPRVLLLDEPSMGLAPIIVQEIFRI 183 Query: 186 VQEINKTGMTVLLVEQNVRQALRIAQRGYVLETGKIVLEDSGANLLGNPKVVEAYLGG 243 ++ IN G+T+ LVEQNVRQAL+IAQRGYVLETG+IVL DSG LLGNP+V+EAYLGG Sbjct: 184 LRTINAEGLTIFLVEQNVRQALKIAQRGYVLETGQIVLADSGQRLLGNPRVLEAYLGG 241 >TM1139 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Tma Thermotoga maritima Length = 239 Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 133/233 (57%), Positives = 176/233 (75%) Query: 10 ILQVEDLAVAYGHIEAVKGISLSLNEGEITALVGANGAGKSTSLLAISGLVKAQRGRVLL 69 +L+V+ L V YG I A+KGI L + G+I L+GANGAGK+T+L AI+GLV+AQ+G+++ Sbjct: 5 VLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIF 64 Query: 70 NGQDLLQMSPHRIVESGVVQVAEGRATLTTLTVEENLALGAYTRKDKDGVARDLEWVYSI 129 NGQD+ H I G+ V EGR LTV ENL +GAY RKDK+G+ RDLEW++S+ Sbjct: 65 NGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDLEWIFSL 124 Query: 130 FPRLKHRATGLAGNLSGGEQQMLAIGRALMAKPKVLLLDEPSMGLAPLIIQEIFRIVQEI 189 FPRLK R L G LSGGEQQMLAIGRALM++PK+L++DEPS+GLAP+++ E+F ++Q+I Sbjct: 125 FPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQKI 184 Query: 190 NKTGMTVLLVEQNVRQALRIAQRGYVLETGKIVLEDSGANLLGNPKVVEAYLG 242 N+ G T+LLVEQN AL++A GYVLETG+IVLE + LL N V +AYLG Sbjct: 185 NQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNEMVRKAYLG 237 >SP0753 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Spn Streptococcus pneumoniae TIGR4 Length = 236 Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 128/234 (54%), Positives = 173/234 (73%) Query: 10 ILQVEDLAVAYGHIEAVKGISLSLNEGEITALVGANGAGKSTSLLAISGLVKAQRGRVLL 69 +L+VE+L+V YG I+AV+ +S +NEGE+ +L+GANGAGK+T L +SGLV+ G++ Sbjct: 3 MLKVENLSVHYGMIQAVRDVSFEVNEGEVVSLIGANGAGKTTILRTLSGLVRPSSGKIEF 62 Query: 70 NGQDLLQMSPHRIVESGVVQVAEGRATLTTLTVEENLALGAYTRKDKDGVARDLEWVYSI 129 GQ++ +M +IV SG+ QV EGR LTV ENL +GA+ +K+++ +L+ V+S Sbjct: 63 LGQEIQKMPAQKIVASGLSQVPEGRHVFPGLTVMENLEMGAFLKKNREENQANLKKVFSR 122 Query: 130 FPRLKHRATGLAGNLSGGEQQMLAIGRALMAKPKVLLLDEPSMGLAPLIIQEIFRIVQEI 189 FPRL+ R A LSGGEQQMLA+GRALM+ PK+LLLDEPSMGLAP+ IQEIF I+Q+I Sbjct: 123 FPRLEERKNQDAATLSGGEQQMLAMGRALMSTPKLLLLDEPSMGLAPIFIQEIFDIIQDI 182 Query: 190 NKTGMTVLLVEQNVRQALRIAQRGYVLETGKIVLEDSGANLLGNPKVVEAYLGG 243 K G TVLL+EQN +AL I+ RGYVLETG+IVL +G L + +V +AYLGG Sbjct: 183 QKQGTTVLLIEQNANKALAISDRGYVLETGRIVLSGTGKELASSEEVRKAYLGG 236 >FN1428 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Fnu Fusobacterium nucleatum Length = 237 Score = 254 bits (650), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 121/235 (51%), Positives = 172/235 (73%), Gaps = 1/235 (0%) Query: 10 ILQVEDLAVAYGHIEAVKGISLSLNEGEITALVGANGAGKSTSLLAISGLVKAQRGRVLL 69 +L+V+DL V Y +I+A+KGISL +NEGE+ +++GANGAGK+T+L ISGL+ + G ++ Sbjct: 3 MLEVKDLQVFYDNIQALKGISLEINEGEVVSIIGANGAGKTTTLQTISGLITPKSGSIIF 62 Query: 70 NGQDLLQMSPHRIVESGVVQVAEGRATLTTLTVEENLALGAYTRKDK-DGVARDLEWVYS 128 G++LL+ H I + G+ QV EGR + L V++NL LG +T KD + D Y Sbjct: 63 EGKNLLKEKAHNICKLGIAQVPEGRRIFSKLAVKDNLKLGQFTVKDSAEKKEEDRANFYK 122 Query: 129 IFPRLKHRATGLAGNLSGGEQQMLAIGRALMAKPKVLLLDEPSMGLAPLIIQEIFRIVQE 188 +FPR+ R LAG LSGGEQQMLA+GRALM++PK+L+LDEPSMGL+PL ++EIF ++++ Sbjct: 123 VFPRMSERKNQLAGTLSGGEQQMLAMGRALMSRPKLLILDEPSMGLSPLFVKEIFEVIKQ 182 Query: 189 INKTGMTVLLVEQNVRQALRIAQRGYVLETGKIVLEDSGANLLGNPKVVEAYLGG 243 + + G T+LLVEQN + AL I+ R YV+ETG+IVLE +LL N +V +AYLGG Sbjct: 183 LKEKGTTILLVEQNAKMALSISDRAYVIETGEIVLEGKAEDLLYNDRVKKAYLGG 237 >DR2118 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Dra Deinococcus radiodurans Length = 236 Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 119/234 (50%), Positives = 170/234 (72%) Query: 10 ILQVEDLAVAYGHIEAVKGISLSLNEGEITALVGANGAGKSTSLLAISGLVKAQRGRVLL 69 +L++E+L V YG I+AV+G+SL + EGE+ L+GANGAGK+T+L A+S +V+ G + Sbjct: 3 LLEIENLGVNYGAIQAVRGLSLEVQEGEVVTLIGANGAGKTTTLRAVSRMVRPVAGIIRF 62 Query: 70 NGQDLLQMSPHRIVESGVVQVAEGRATLTTLTVEENLALGAYTRKDKDGVARDLEWVYSI 129 G+D+ ++ P V+ G+ Q EGR L ++++NL LGAY R D+ G+ DL+ +Y Sbjct: 63 GGRDITRIPPDEAVKIGIAQSPEGRQVLARQSIQDNLELGAYVRSDRAGIQADLQRMYDR 122 Query: 130 FPRLKHRATGLAGNLSGGEQQMLAIGRALMAKPKVLLLDEPSMGLAPLIIQEIFRIVQEI 189 FPRL R T LAG LSGGEQQMLAI RALM++PK+LLLDEPS+GLAPLI++EIF I++E+ Sbjct: 123 FPRLGERRTQLAGTLSGGEQQMLAIARALMSRPKLLLLDEPSLGLAPLIVREIFTIIREL 182 Query: 190 NKTGMTVLLVEQNVRQALRIAQRGYVLETGKIVLEDSGANLLGNPKVVEAYLGG 243 N+ GMT+LLVEQN + A+ + R YVLE G++ + L+ + +V+ AYLGG Sbjct: 183 NEQGMTILLVEQNAKLAMNASHRTYVLEAGQLTFSGVSSELVNDERVLHAYLGG 236