BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2868.p (362 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3211 [Q] COG0767 ABC-type transport system involved in resista... 388 e-107 XF1303 [Q] COG0767 ABC-type transport system involved in resista... 317 3e-86 CC2318 [Q] COG0767 ABC-type transport system involved in resista... 249 1e-65 BMEI0965 [Q] COG0767 ABC-type transport system involved in resis... 210 4e-54 Cj1646 [Q] COG0767 ABC-type transport system involved in resista... 209 1e-53 >PA3211 [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component Pae Pseudomonas aeruginosa Length = 381 Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust. Identities = 218/358 (60%), Positives = 272/358 (75%), Gaps = 2/358 (0%) Query: 6 GDWTLSNFRSLSRQIAQQRPAIGDDLVLTFSALSAFDTVGAKLLVDLLGVPMALRQTGED 65 GDWTL+++ +L R++ + R + ++ S L A DT GA LL +LLG + Sbjct: 25 GDWTLAHYTALEREVTRLRSEVAANVSFDLSQLGALDTAGAALLAELLGAERLADLAELE 84 Query: 66 SNLPRAWRGLLATVADA-KAIAMPKAAAPRQAWITDMLERAGIATLNLRGCTRDLLGFTG 124 LPR + LL TV A P+ P I ++L R G A + LLGF G Sbjct: 85 PGLPRERQALLKTVGHALHDFCEPEKPKPPTTAI-ELLARIGCAMETFWLHLKALLGFIG 143 Query: 125 LCLQTLASSFWRPSRWRFTAVVAQVEQTGLDAVPIVSLLTFMVGAVVAFLGATVLADFGA 184 L L+TL S RP+ WR T +VA +E++GLDAVPI++LLTF+VGAV+AFLGATVLA+FGA Sbjct: 144 LTLETLFRSLVRPASWRVTPLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGA 203 Query: 185 SLYTVDLVAFSFLREFAVLLTAILMAGRTASSFTAQIGSMKANEEIDAIRALGLDPVNLL 244 ++YTV+LV FSFLREFAVLLTAILMAGRTAS+FTAQIGSMKANEEIDAIRALGL+P+ LL Sbjct: 204 TIYTVNLVVFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELL 263 Query: 245 VLPRLLALLVSMPLLTFIGMMSGLLGGAMVCALSLDISPTMFLSLVQQDVGIRHFVLGMV 304 VLPR+LALLVS+P+LTF+GM+ G++GG VCA +LDI P MFLS+++ +G++HF++G+ Sbjct: 264 VLPRVLALLVSLPMLTFVGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGIS 323 Query: 305 KAPLFAFVIALIGCNEGFKVSGSAQSVGEHTTSSVVQSIFVVILLDALAALFFMEMGW 362 KAPLFAF+IA+IGC EGFKVSGSAQSVGEHTT+SVV SIFVVILLDALAAL FMEMGW Sbjct: 324 KAPLFAFLIAVIGCLEGFKVSGSAQSVGEHTTTSVVHSIFVVILLDALAALLFMEMGW 381 >XF1303 [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component Xfa Xylella fastidiosa 9a5c Length = 396 Score = 317 bits (812), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 175/361 (48%), Positives = 237/361 (65%), Gaps = 9/361 (2%) Query: 2 LHVEGDWTLSNFRSLSRQIAQQRPAIGDDLVLTFSALSAFDTVGAKLLVDLLGVPMALRQ 61 +H+ G W L+N + S + +I + + D+ GA + LL Sbjct: 45 IHLSGSWVLANVLTASELLQSYSNSIQH---INARNIDQLDSAGA---LQLLRFATRTGL 98 Query: 62 TGEDSNLPRAWRGLLATVADAKAIAMPKAAAPRQAWITDMLERAGIATLNLRGCTRDLLG 121 + R L++T+ + PK R LER GIA + R D+ Sbjct: 99 KNDAIGFREEHRPLISTI-EILDDEYPKPE--RDYGFLAALERLGIAVVKTRRNIVDVCS 155 Query: 122 FTGLCLQTLASSFWRPSRWRFTAVVAQVEQTGLDAVPIVSLLTFMVGAVVAFLGATVLAD 181 F G L +A P R+R T+ V +EQ GLDAVP+V +L+++VGAV+AFLG+T+L + Sbjct: 156 FLGENLVKIAQLAREPRRFRITSTVHHMEQVGLDAVPLVVVLSYLVGAVIAFLGSTILRN 215 Query: 182 FGASLYTVDLVAFSFLREFAVLLTAILMAGRTASSFTAQIGSMKANEEIDAIRALGLDPV 241 FGA ++ V+LV +FLREFAVLLTAI++AGRTAS+FTAQIG+MK+ EEIDAI+ LGLDP+ Sbjct: 216 FGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAIQTLGLDPI 275 Query: 242 NLLVLPRLLALLVSMPLLTFIGMMSGLLGGAMVCALSLDISPTMFLSLVQQDVGIRHFVL 301 +LLV+PRL+ALLV +PLLTFI M++GL GG V A L I P M+LS + + + RHF++ Sbjct: 276 DLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHETMQFRHFII 335 Query: 302 GMVKAPLFAFVIALIGCNEGFKVSGSAQSVGEHTTSSVVQSIFVVILLDALAALFFMEMG 361 GM KAPLFA +I LIGC EG KV+G+AQSVG+HTTSSVVQ+I +VI++DALAAL+FM MG Sbjct: 336 GMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALAALWFMRMG 395 Query: 362 W 362 W Sbjct: 396 W 396 >CC2318 [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component Ccr Caulobacter vibrioides Length = 371 Score = 249 bits (635), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 149/357 (41%), Positives = 211/357 (59%), Gaps = 11/357 (3%) Query: 6 GDWTLSNFRSLSRQIAQQRPAIGD--DLVLTFSALSAFDTVGAKLLVDLLGVPMALRQTG 63 GDWT ++ + A+ D DL + ++ DT GA ++ G + + Sbjct: 22 GDWTARGLFDAGPRLTE---ALEDRRDLRFDLTGVNRCDTAGAYAILRAAGDRLKSDRII 78 Query: 64 EDSNLPRAWRGLLATVADAKAIAMPKAAAPRQAWITDMLERAGIATLNLRGCTRDLLGFT 123 + R LL V A + +AA P + +LER G L L F Sbjct: 79 ARKQVLR----LLELVGAAIKVEPQRAARPTGFYA--LLERIGRGVFGLFADGYGTLVFL 132 Query: 124 GLCLQTLASSFWRPSRWRFTAVVAQVEQTGLDAVPIVSLLTFMVGAVVAFLGATVLADFG 183 G L L S P R R+ +VA E+ GLDA+PI++ TF +GAVVA LGA +L DFG Sbjct: 133 GHLLVALGRSIVSPHRIRWAPIVALCERAGLDAMPIIATTTFFIGAVVALLGANMLTDFG 192 Query: 184 ASLYTVDLVAFSFLREFAVLLTAILMAGRTASSFTAQIGSMKANEEIDAIRALGLDPVNL 243 A +Y V+L+ S +REF +L+TAIL+AGR+ASSF A+IGSMK N+EIDA++ +G+DP Sbjct: 193 AQVYAVELIGISVMREFNILITAILLAGRSASSFAAEIGSMKMNQEIDAMQVMGVDPYEA 252 Query: 244 LVLPRLLALLVSMPLLTFIGMMSGLLGGAMVCALSLDISPTMFLSLVQQDVGIRHFVLGM 303 LVLPR ALL+++PLLTF+ ++GL GG +V LD+SPT FL + VG HF +G+ Sbjct: 253 LVLPRFAALLLTIPLLTFVATIAGLAGGILVVWSVLDLSPTFFLQRIVDYVGATHFWIGL 312 Query: 304 VKAPLFAFVIALIGCNEGFKVSGSAQSVGEHTTSSVVQSIFVVILLDALAALFFMEM 360 KAP+ A VIA IGC +G +V +S+G T++VV +IF +IL+DA+ AL +ME+ Sbjct: 313 SKAPVMAMVIAAIGCRQGMEVGKDIESLGRRVTAAVVHAIFAIILIDAVFALIYMEL 369 >BMEI0965 [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component Bme Brucella melitensis Length = 390 Score = 210 bits (535), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 131/360 (36%), Positives = 206/360 (57%), Gaps = 5/360 (1%) Query: 1 VLHVEGDWTLSNFRSLSRQIAQQRPAIGDD-LVLTFSALSAFDTVGAKLLVDLLGVPMAL 59 V+H+ G W + + ++ A GD ++ S +S DT GA L+ L A Sbjct: 28 VIHLSGPWISQSVHLVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLRQRLAAK 87 Query: 60 RQTGEDSNLPRAWRGLLATVADA--KAIAMPKAAAPRQAWITDMLERAGIATLNLRGCTR 117 + AW L+ V +A + + +P+ +P + L G A +++ + Sbjct: 88 HVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSP--FFFIAFLNVLGGAVISMFNDFK 145 Query: 118 DLLGFTGLCLQTLASSFWRPSRWRFTAVVAQVEQTGLDAVPIVSLLTFMVGAVVAFLGAT 177 + G ++ + R + A+V Q+++ G+ A+PIV L++ +VGA++A GA Sbjct: 146 MAMHILGATIRGAQLKYGRGNGIPIAAIVTQMDRMGVGAIPIVVLMSTIVGAIIAQQGAF 205 Query: 178 VLADFGASLYTVDLVAFSFLREFAVLLTAILMAGRTASSFTAQIGSMKANEEIDAIRALG 237 L FGA ++ VDLV LRE VLLTAI++AGR+ S+ TA+IGSMK EE DA+ +G Sbjct: 206 QLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETDALTVIG 265 Query: 238 LDPVNLLVLPRLLALLVSMPLLTFIGMMSGLLGGAMVCALSLDISPTMFLSLVQQDVGIR 297 L+PV +LV PRL+AL+V +PLLT + +S L+G A V L +ISP F+S + V + Sbjct: 266 LNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLHDAVALN 325 Query: 298 HFVLGMVKAPLFAFVIALIGCNEGFKVSGSAQSVGEHTTSSVVQSIFVVILLDALAALFF 357 + G++KAP A +I ++ EG KV GSA+S+G T+SVV++IFVVI++D L A+F+ Sbjct: 326 TYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDGLFAMFY 385 >Cj1646 [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component Cje Campylobacter jejuni Length = 369 Score = 209 bits (531), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 121/330 (36%), Positives = 180/330 (54%), Gaps = 14/330 (4%) Query: 29 DDLVLTFSALSAFDTVGAKLLVDLLGVPMALRQTGEDSNLPRAWRGL------LATVADA 82 +++ F L A DT G + +AL ++ N+ GL L + + Sbjct: 38 KEVIFDFKDLKAIDTAGVRFF-------LALENDLKNKNIKITKEGLNSRFQTLFELCEK 90 Query: 83 KAIAMPKAAAPRQAWITDMLERAGIATLNLRGCTRDLLGFTGLCLQTLASSFWRPSRWRF 142 + K Q + ++ G +L L R + FTG +L P +RF Sbjct: 91 NYQRLGKTKKSHQNF-SEYFIDLGKLSLELLKILRKFINFTGAFFTSLFLCLKNPKNFRF 149 Query: 143 TAVVAQVEQTGLDAVPIVSLLTFMVGAVVAFLGATVLADFGASLYTVDLVAFSFLREFAV 202 A + +E + A+PIV L +VG V+A+ A LA FGA+++ VDL+ S RE A Sbjct: 150 IAFLYHIENSAFKALPIVILTALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAP 209 Query: 203 LLTAILMAGRTASSFTAQIGSMKANEEIDAIRALGLDPVNLLVLPRLLALLVSMPLLTFI 262 L+ AI++AGR+ASS+TAQIG MK +EI A+ +G +V+PR++AL+V+MPL+ I Sbjct: 210 LIAAIVIAGRSASSYTAQIGVMKITDEIAAMNTMGFRSFEFIVIPRVMALVVAMPLIVAI 269 Query: 263 GMMSGLLGGAMVCALSLDISPTMFLSLVQQDVGIRHFVLGMVKAPLFAFVIALIGCNEGF 322 ++GG MV L+LDIS FL ++ V I+H +G+ KAP+F F+I LI C GF Sbjct: 270 SDAISIIGGMMVAKLNLDISFAEFLRRFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGF 329 Query: 323 KVSGSAQSVGEHTTSSVVQSIFVVILLDAL 352 +V + QS+G +TT SVV +IF VI DAL Sbjct: 330 EVKNTTQSIGIYTTKSVVNAIFWVIAFDAL 359