BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2860.p (563 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3923 Non COG 150 1e-35 PA3422 Non COG 145 2e-34 PA3082 Non COG 112 3e-24 BS_pstS [P] COG0226 ABC-type phosphate transport system, peripla... 33 1.6 Rv0362 [P] COG2239 Mg/Co/Ni transporter MgtE (contains CBS domai... 32 3.7 >PA3923 Non COG Length = 641 Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 168/661 (25%), Positives = 253/661 (38%), Gaps = 141/661 (21%) Query: 10 IALAAATLCSGGAQAITFEGETVSGNFDSTVSFGVGVRASKQGCGLVIGSSGGNATPASG 69 +A++ A+ + A +TF + G+FDS +S G +K L+ ++GG Sbjct: 15 LAVSLASSLAAPAFGVTFNIGEIEGSFDSALSVGASWSTAKPNKNLIGVNNGGKG----- 69 Query: 70 PSAPAGCADALSSLNDQGDLNYNRGDRFTTYLKGTHELLLNMPEDVKFLGRVSWLRDFSA 129 LS +D LN+ RG+ F+ KG H+L L + FL R + DF Sbjct: 70 ----------LSQTSDDSHLNFKRGETFSKVFKGIHDLELKYGDTGVFL-RGKYWYDFEL 118 Query: 130 TRNTGNISGANPTGRSLSDEATNELHSKVRLLDLWVSKSFDLGEERARIRVGNQVVNWGE 189 + +GR T S LLD ++ ++ +G+ +R+G QVVNWGE Sbjct: 119 KDEHREFKDIDDSGRK-----TLAKSSGAELLDAFIYHNYAIGDLPGSVRLGKQVVNWGE 173 Query: 190 SLFIAGGINQTNAIDLMRLSNPGTQLKEAILPAPMVNFATGLGHGFSLESYVQQGWESNY 249 S FI GI+ N ID+ PG+++KE ++P M + L S E + Q W+ Sbjct: 174 STFIQNGISAINPIDVTAFRRPGSEIKEGLIPVNMFYLSQNLTDNLSAEGFYQIEWDQTV 233 Query: 250 FPPVGSYWSSA-TVGIGADA-LGVPTTNR------------------------------- 276 G+++S V G D L V T N+ Sbjct: 234 VDNCGTFFSQPDVVADGCDQNLAVLTNNKASINLLNNVLAGAGLSVTPSPWDEGILVRRG 293 Query: 277 ----PRSAGQYGVALRYTPPGADVNYGLYVMNYHDKSPVLS----TANTPSGLG------ 322 R +GQYG ALRY + +G Y MNYH + P+ S +A+T + + Sbjct: 294 PDRDARDSGQYGFALRYFADELNTEFGAYYMNYHSRLPIFSGQGASASTMAAINDLATRL 353 Query: 323 -----------------------YSYLEDRKMVGLSANFPLGN-WAIGTELSYRPK---- 354 Y ED +M GLS + L N A E+SYRP Sbjct: 354 AAINPALAAQAAAAATAGNSSYFIEYPEDIRMFGLSFSTTLPNGTAWSGEVSYRPNAPVQ 413 Query: 355 -----------DAVSLNGSVANANGGLCMTNGKCYVETEKYQLAVTGMLSLSPSEHGAIL 403 D VS+ G+ N + NG+ + Y+ L + + Sbjct: 414 LNTTDILFAGLDPVSIGGNRPYDNASVL--NGQAGQDLHGYRRKEITQLQTTLTHF--FD 469 Query: 404 KALGADTATLMLEA----VAIKYPNLKSAYGGIPV-----------------AAGLWGWG 442 + +GA+ TL+ E V K+ YG PV A + G Sbjct: 470 QVMGAERLTLVGEIGWTHVGGLESTSKARYGRDPVFGPGPLPGTISGLASCQALNVSTLG 529 Query: 443 DDTTANASRTLANGGNTAGVGTSTSYGYNFDFSWVYDGSVIPGWQVIPEVYFFHAVKGRT 502 N SR N G T TS ++GY W Y+ V G + P V + H V G + Sbjct: 530 TAEANNVSRYCENDGYT----TSDAWGYRARAIWDYN-DVFMGVNLKPSVAWSHDVDGYS 584 Query: 503 PNATATFMEGAKMANFTVTFTQNPAKWQVALNMAKFWGGASVFDQPLRDRSFYGMTVSRN 562 P A F EG K + V + + +L+ F+ G + DR F ++ N Sbjct: 585 PGPGANFEEGRKAVSLGVD-AEYQNTYTASLSYTNFFDGKYT---TVDDRDFVALSFGMN 640 Query: 563 F 563 F Sbjct: 641 F 641 >PA3422 Non COG Length = 585 Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 153/609 (25%), Positives = 250/609 (41%), Gaps = 117/609 (19%) Query: 22 AQAITFEGETVSGNFDSTVSFGVGVRASKQGCGLVIGSSGGNATPASGPSAPAGCADALS 81 A A++F + G FDS++S G + +GG+A+ S Sbjct: 27 ASAVSFNIGEIEGQFDSSLSVGASWSMRSADKDYIGTRNGGHAS---------------S 71 Query: 82 SLNDQGDLNYNRGDRFTTYLKGTHELLLNMPEDVKFLGRVSWLRDFSATRNTGNISGANP 141 +D G LN+ +G+ F+ KG H+L L + F R + DF + + Sbjct: 72 QTSDDGRLNFKKGETFSKIFKGIHDLELKYGDTGAFF-RGKYWYDFELKDEHRLLYDIDD 130 Query: 142 TGRSLSDEATNELHSKVRLLDLWVSKSFDLGEERARIRVGNQVVNWGESLFIAGGINQTN 201 R ++ S +LLD ++ ++ +G+ +RVG QVV+WGES FI IN N Sbjct: 131 HNRKEGAKS-----SGAQLLDAFLYHNYSIGDLPGSVRVGKQVVSWGESTFIQNSINSIN 185 Query: 202 AIDLMRLSNPGTQLKEAILPAPMVNFATGLGHGFSLESYVQQGWESNYFPPVGSYWSSA- 260 +D+ PG ++KE ++P M+ + G+ ++E + Q W+ G+++S+ Sbjct: 186 PMDVAAFRRPGAEIKEGLIPVNMLYLSQGISDALTVEGFYQLEWDQTVIDNCGTFFSTTD 245 Query: 261 --------TVGIGADALGVPTT----------NRPRSAGQYGVALR-YTPPGADVNYGLY 301 V G+D P R +GQ+G+ALR Y D +GLY Sbjct: 246 VVADGCERMVYAGSDFDPNPANGYRYLPRAGDRDARDSGQWGLALRWYAAELNDTEFGLY 305 Query: 302 VMNYHDKSPV--------LSTANTPSG--LGY---SYLEDRKMVGLSANFPLGNWAIGTE 348 MNYH ++P L+T++ +G GY Y ED ++ GLS +G+ ++ E Sbjct: 306 AMNYHSRNPYYSVIAGNGLATSDPVTGRSTGYYFIDYPEDIRLYGLSFQTNIGSTSVAGE 365 Query: 349 LSYRPKDAVSLNGS---------------------VANANGGLCMTNGKCYVETEKYQLA 387 LSYRP + +N + A G + NG + Q+ Sbjct: 366 LSYRPNMPLQINSTDMSIAAIYPTTLFGNPIYDSGFATPRAGEVI-NGYVRKPVTQAQVT 424 Query: 388 VTGMLSLSPSEHGAILKALGADTATLMLEAVAIKYPNLKSAYG-----GIPVAAGLWGWG 442 VT + L AD T++ E + Y +L G G G+ Sbjct: 425 VTQFFD----------RVLAADRLTVVGE---VGYNHLSGVDGDDLRYGRDAIYGIGELP 471 Query: 443 DDTTANASRTLAN--GGNTAGVGTSTSYGYNFDFSWVYDGSVIPGWQVIPEVYFFHAVKG 500 ++ + +AN N+ G T S+GY Y +V G + P + + H V+G Sbjct: 472 NNALCTGALNVANPQECNSHGFYTRNSWGYRLRGILEYP-NVFAGVNLKPNLAWSHDVEG 530 Query: 501 RTPNATATFMEGAKM------ANFTVTFTQNPAKWQVALNMAKFWGGASVFDQPLRDRSF 554 PN F EGAK A++ T+T +++ F+GG P+ DR F Sbjct: 531 YGPN----FSEGAKAVSVGLDADYQNTYT-------ASISYTDFFGGNY---NPINDRDF 576 Query: 555 YGMTVSRNF 563 ++ NF Sbjct: 577 LAVSFGVNF 585 >PA3082 Non COG Length = 654 Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 153/670 (22%), Positives = 252/670 (37%), Gaps = 165/670 (24%) Query: 17 LCSGGAQAITFE--GETVSGNFDSTVSFGVGVRASKQG-CGLVIGSSGGNATPASGPSAP 73 L G AQA+ F VSG+ D+T+S+G R Q I ++ GN +G + Sbjct: 27 LLGGQAQAVEFSFLDNEVSGSLDTTLSYGTLWRVQGQDKSNNDINTNDGNRNFDTGLVSE 86 Query: 74 AG--CADALSSLNDQGDLNYNRGDRFTTYLKGTHELLLNMPEDVKFLGRVSWLRDFSATR 131 +D ++ + G +++GT D + + + + D+ + Sbjct: 87 VYKITSDLEATWRNYG-----------VFIRGTAFY------DTQIMDKRN---DYYSHN 126 Query: 132 NTGNISGANPTGRSLSDEATNELHSKVRLLDLWVSKSFDLGEERARIRVGNQVVNWGESL 191 + S + P + + + K +LD +V S+D+G R G QV NWGE + Sbjct: 127 DPSQPSQSYPHDDRFTSQTRDIAGHKAEILDAYVYGSWDIGNMPLSARFGRQVFNWGEGI 186 Query: 192 FIAGGINQTNAIDLMRLSNPGTQLKEAILPAPMVNFATGLGHGFSLESYVQQGWESNYFP 251 F GG+N TN +D + PG++LKE ++P ++F GL S+E++ Q W+ Sbjct: 187 FYRGGVNTTNPVDAAKYRLPGSELKEVLMPVEALSFNIGLTDNLSMETFYQWNWKETRLD 246 Query: 252 PVGSYWSSATV----------GIGADALGVPTT-------------NRPRSAG------- 281 PVG+++S + AL P N P +G Sbjct: 247 PVGTFFSETDLFADGGNTGYSDFTGTALDTPVPGFGNVIGLYQALGNNPLLSGALKNTGL 306 Query: 282 -------QYGVALRYTPPGADVN----------------------YGLYVMNYHDKSPVL 312 YG ++ + G D+N +G Y +NYH K P L Sbjct: 307 YANGVTPAYGNVMKVSSIGKDINARNDGQFGVAFRYIAEELNSTEFGFYFVNYHSKEPTL 366 Query: 313 -------------STANT------------PSGL-----------GYSYLEDRKMVGLSA 336 + ANT +GL + ED +M G S Sbjct: 367 YADIGDYAGADLAALANTLRPIAGNLAEALANGLVTADVMGNINARREFAEDIRMYGFSF 426 Query: 337 NFPLGNWAIGTELSYRPKDAVSL-----------NGSVANANGGLCMTNGKC-------- 377 N +G+ ++ EL+YRP + + +G+ ANGG G+ Sbjct: 427 NTTVGDASVFGELAYRPNLPIGIAATNDLIGDLAHGAAEAANGGQINVGGQMVGLGGQIH 486 Query: 378 -YVETEKYQLAVTGMLSLSPSEHGAILKALGADTATLMLEAVAIKYPNLKSAYGGIPVAA 436 Y E + ++ + + PS L + A+ A+ L ++KY +AY G Sbjct: 487 NYERVEAFNTSLGTIYNFGPSLSFDSLTGV-AELASEHLRGSSLKY----TAYDG----- 536 Query: 437 GLWGWGDDTTANASR---TLANGGNTAGVGTSTSYGYNFDFSWVYDGSVIPGWQVIPEVY 493 T A R + +GG+ +YGY S ++ V G V P V Sbjct: 537 -------STRYYAGRGNSSYVSGGDRGDQVNRNAYGYTLLLSGTWN-DVFAGVNVSPYVV 588 Query: 494 FFHAVKGRTPNATATFMEGAKMANFTVTFTQNPAKWQVALNMAKFWGGASVFDQPLRDRS 553 + +G + T F+EG K + T + L +F+GG + +RDR Sbjct: 589 YKDDFEGNSYQ-TGNFIEGRKAYTLGIKATY-LNSLEGELQYTEFYGGGQ--NNNIRDRD 644 Query: 554 FYGMTVSRNF 563 G+TV +F Sbjct: 645 NIGLTVKYSF 654 >BS_pstS [P] COG0226 ABC-type phosphate transport system, periplasmic component Bsu Bacillus subtilis Length = 300 Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 5/77 (6%) Query: 264 IGADALGVPTTNRPRSAGQYGVALRYTPPGADVNYGLYVMNYHDKSPVLSTANTPSGLGY 323 +G + NRP S+G ++Y GA+ G+ + + ++ A+TP +GY Sbjct: 155 LGGKDQKITLVNRPDSSGTRATFVKYALDGAEPAEGITEDSSNTVKKII--ADTPGAIGY 212 Query: 324 ---SYLEDRKMVGLSAN 337 SYL D K+ LS + Sbjct: 213 LAFSYLTDDKVTALSID 229 >Rv0362 [P] COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) Mtu Mycobacterium tuberculosis H37Rv Length = 460 Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 9/131 (6%) Query: 324 SYLEDRKMVGLSANFPLGNWA-IGTELSYRPKDAVSLNGSVANANGGLCM-TNGKCYVET 381 S L+ R ++G+ + W + TEL R ++ SL+ + G L TN E+ Sbjct: 9 STLDIRHVIGIGTPKAVDLWLDVVTELPDRARELGSLSKAELGKLGPLLDGTNAVELFES 68 Query: 382 EKYQLAVTGMLSLSPSEHGAILKALGADTATLMLEAVAIKYPNLKSAYGGIP-----VAA 436 +LA + ++ PS L+AL +D A +L K P ++ +P V Sbjct: 69 IDDKLAAEALHAMDPSLAATFLEALDSDHAANILR--EFKEPKREALLTLLPLERAMVLR 126 Query: 437 GLWGWGDDTTA 447 GL W +D A Sbjct: 127 GLLSWPEDCAA 137