BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2841.p (427 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value slr0801 [P] COG2072 Predicted flavoprotein involved in K+ transp... 506 e-143 PA5393 [P] COG2072 Predicted flavoprotein involved in K+ transpo... 280 6e-75 BS_trkA [P] COG2072 Predicted flavoprotein involved in K+ transp... 171 4e-42 BH3677 [P] COG2072 Predicted flavoprotein involved in K+ transpo... 131 3e-30 mll7934 [P] COG2072 Predicted flavoprotein involved in K+ transp... 95 4e-19 >slr0801 [P] COG2072 Predicted flavoprotein involved in K+ transport Syn Synechocystis Length = 416 Score = 506 bits (1302), Expect = e-143, Method: Compositional matrix adjust. Identities = 239/401 (59%), Positives = 298/401 (74%), Gaps = 4/401 (0%) Query: 11 HHSVIIIGGGQAGLSMSWYLKRSGVDHLVLEKHQVGHAWRNERWDTFCLVTPNWQCNLPG 70 H+SVII+GGGQAGL++S+ LK+ +DH++ EK+Q+GHAWRN+RWD+FCLVTPNWQC LPG Sbjct: 5 HYSVIIVGGGQAGLAISYLLKQESIDHVIFEKNQIGHAWRNQRWDSFCLVTPNWQCRLPG 64 Query: 71 YPYRGNDPYGFMKKDEIVDYLDGFVASFDPPVREGVTVNKLWRDGALWRISASDGQYAAD 130 +PY G D GFM KDEIV YL+ + ASF P+ EGV V+KL + + + S G Y AD Sbjct: 65 FPYAGGDDQGFMLKDEIVQYLEDYAASFQAPILEGVEVSKLSQRTDAFEVITSQGIYTAD 124 Query: 131 QVVVAVGGYHIPVVPRAAERLPQHIVQLHSSQYLNPQSLPAGEVLVVGTGQSGCQIAEDL 190 QVVVA GGYH P + A++LP HIVQLHS Y NP++LP +L+VGTGQSGCQIAEDL Sbjct: 125 QVVVATGGYHTPKIAAIAKKLPPHIVQLHSVDYKNPETLP-DRILLVGTGQSGCQIAEDL 183 Query: 191 HLAGRRVHLGVGDAPRVARSYRGKDVVEWLDKMKYYDLPVDQHPLGTGVREKTNHYVTGR 250 HLAG+ VHL G APR R YRG+DVVEWL+ M +YDLP+D+HP VR KTNHY+TGR Sbjct: 184 HLAGKTVHLATGSAPRSPRRYRGRDVVEWLELMGHYDLPIDEHPQKEMVRHKTNHYLTGR 243 Query: 251 DGGHDIDLRKFALEGMQLYGKFEALEGEVARFGGGLKAYLDDADAVSESIKDSIDKFIAA 310 DGG +IDLR+FALEGM LYG+ + ++G F LK LD ADA + IK SID++IA Sbjct: 244 DGGREIDLRQFALEGMHLYGRLKDIDGNQILFADNLKENLDQADATAARIKQSIDEYIAK 303 Query: 311 NQIDAPSEARYVPLWQPESDAPRTLDLRAAGISAVVWCIGFRTDFSWINEPIFDGRGYPG 370 NQ+DAP EA Y P+W+P S P TL++ I AV+W GF +++W++ P+F+ G P Sbjct: 304 NQLDAPIEAPYQPVWEPTS-IPLTLNIDE--IDAVIWSTGFNFNYAWVDVPVFNSMGEPL 360 Query: 371 HERGVTAASGLYFLGLPWQYTWGSGRFSGIDRDARYLFEHI 411 H RGVT +GLYFLGLPW YTWGSGRFSG+ RDA YL E I Sbjct: 361 HNRGVTNVAGLYFLGLPWLYTWGSGRFSGVARDAEYLAEKI 401 >PA5393 [P] COG2072 Predicted flavoprotein involved in K+ transport Pae Pseudomonas aeruginosa Length = 450 Score = 280 bits (715), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 162/420 (38%), Positives = 230/420 (54%), Gaps = 12/420 (2%) Query: 1 MHTQEQGAVRHHSVIIIGGGQAGLSMSWYLKRSGVDHLVLEKHQVGHAWRNERWDTFCLV 60 + ++ G V +++G GQAG++MS +L R GV HLVLE++++ AWR+ RWD+ Sbjct: 9 LPSRTDGTVEKTDTLVVGAGQAGVAMSEHLSRLGVPHLVLERNRIAEAWRSGRWDSLVAN 68 Query: 61 TPNWQCNLPGYPYRGNDPYGFMKKDEIVDYLDGFVASFDPPVREGVTVNKLWRDGAL--W 118 P W PG + DP GF KD++ Y + + FD P+R GV V K+ R+ + Sbjct: 69 GPAWHDRFPGMEF-DIDPDGFPGKDQVAAYFEAYAKRFDAPIRTGVEVRKVVRNVGRPGF 127 Query: 119 RISASDGQYAADQVVVAVGGYHIPVVPRAAERLPQHIVQLHSSQYLNPQSLPAGEVLVVG 178 + S G A++VV A G + PV+P A R + I Q+HS+ Y NPQ LP G VLVVG Sbjct: 128 TVDTSAGTIEANRVVAATGPFQRPVIPPIAPR-DERIRQIHSAHYYNPQQLPEGAVLVVG 186 Query: 179 TGQSGCQIAEDLHLAGRRVHLGVGDAPRVARSYRGKDVVEWLDKMKYYDLPVDQHPLGTG 238 G SG QIA++L AGR+V+L VG R RSYR +D WL + +D V + Sbjct: 187 AGSSGVQIADELQRAGRQVYLSVGAHDRPPRSYRNRDFCWWLGVLGEWDAEVAKPG---- 242 Query: 239 VREKTNHYVTGRDGGHDIDLRKFALEGMQLYGKFEALEGEVARFGGGLKAYLDDADAVSE 298 RE V+G GGH +D R A +G+ L G E+ VA F L L D Sbjct: 243 -REHVTIAVSGARGGHTVDFRALAHQGVTLVGLTESFVDGVATFRPDLAENLARGDENYL 301 Query: 299 SIKDSIDKFIAANQIDAPSEA---RYVPLWQPESDAPRTLDLRAAGISAVVWCIGFRTDF 355 ++ D+ D +IA N +D P E R +P Q +D LDL AG+ +++W G+ DF Sbjct: 302 ALLDAADAYIARNGLDLPEEPEARRRLPDPQCVTDPILELDLAEAGVGSIIWATGYAVDF 361 Query: 356 SWINEPIFDGRGYPGHERGVTAASGLYFLGLPWQYTWGSGRFSGIDRDARYLFEHISAIR 415 W+ FD G P H+RGV++ G+YF+GLPW GS G+ DAR++ +HI+ R Sbjct: 362 GWLQVDAFDRDGKPRHQRGVSSEPGVYFIGLPWLSRRGSSFIWGVWHDARHVADHIAIQR 421 >BS_trkA [P] COG2072 Predicted flavoprotein involved in K+ transport Bsu Bacillus subtilis Length = 345 Score = 171 bits (432), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 120/404 (29%), Positives = 187/404 (46%), Gaps = 65/404 (16%) Query: 12 HSVIIIGGGQAGLSMSWYLKRSGVDHLVLEK-HQVGHAWRNERWDTFCLVTPNWQCNLPG 70 + I+IG GQAG+S+ +YLK+S ++L+K H+VG +W+ +R+D+ L T +LPG Sbjct: 2 YDTIVIGAGQAGISIGYYLKQSDQKFIILDKSHEVGESWK-DRYDSLVLFTSRMYSSLPG 60 Query: 71 YPYRGNDPYGFMKKDEIVDYLDGFVASFDPPVREGVTVNKLWRDGALWRISASDGQYAAD 130 G + +GF K+EIV YL +V F+ P++ V + + + I + +Y Sbjct: 61 MHLEG-EKHGFPSKNEIVAYLKKYVKKFEIPIQLRTEVISVLKIKNYFLIKTNREEYQTK 119 Query: 131 QVVVAVGGYHIPVVPRAAERLPQHIVQLHSSQYLNPQSLPAGEVLVVGTGQSGCQIAEDL 190 +V+A G +H P +P ++ L +I QLHSSQY N + L G VLVVG G SG QIA +L Sbjct: 120 NLVIATGPFHTPNIPSISKDLSDNINQLHSSQYKNSKQLAYGNVLVVGGGNSGAQIAVEL 179 Query: 191 HLAGRRVHLGVGDAPRVARSYRGK-DVVEWLDKMKYYDLPVDQHPLGTGVREKTNHYVTG 249 R +L + GK + W DK+ GV ++ Sbjct: 180 S-KERVTYLACSNKLVYFPLMIGKRSIFWWFDKL--------------GVLHASH----- 219 Query: 250 RDGGHDIDLRKFALEGMQLYGKFEALEGEVARFGGGLKAYLDDADAVSESIKDSIDKFIA 309 + GKF +G+ FG LK + + + + + IA Sbjct: 220 ----------------TSIVGKFIQKKGDPV-FGHELKHAIKQKEIILKK------RVIA 256 Query: 310 ANQIDAPSEARYVPLWQPESDAPRTLDLRAAGISAVVWCIGFRTDFSWIN-EPIFDGRGY 368 A Q + + D ++ ++W GFR WIN + + D G Sbjct: 257 AKQNEIIFK-----------------DSSTLEVNNIIWATGFRNPLCWINIKGVLDQEGR 299 Query: 369 PGHERGVTAASGLYFLGLPWQYTWGSGRFSGIDRDARYLFEHIS 412 H RGV+ GLYF+GLPWQ+ GS G+ DA Y+ + ++ Sbjct: 300 IIHHRGVSPVEGLYFIGLPWQHKRGSALLQGVGNDAEYIVKQMN 343 >BH3677 [P] COG2072 Predicted flavoprotein involved in K+ transport Bha Bacillus halodurans Length = 350 Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 116/212 (54%), Gaps = 6/212 (2%) Query: 13 SVIIIGGGQAGLSMSWYLKRSGVDHLVLEKH-QVGHAWRNERWDTFCLVTPNWQCNLPGY 71 V+I+GGGQAG++M +YL + V ++L+ + QVG +WRN R+D+ L TP LPG+ Sbjct: 5 KVVIVGGGQAGIAMGYYLVKEKVPFMILDANEQVGDSWRN-RYDSLVLFTPRTYSQLPGF 63 Query: 72 PYRGNDPYGFMKKDEIVDYLDGFVASFDPPVREGVTVNKLWRD-GALWRISASDGQYAAD 130 P G P GF KDE+ YL + F+ P+R V+++ R + + ++G A+ Sbjct: 64 PMDG-APNGFPTKDEMASYLQQYANHFNLPMRHHTKVDRVTRQQNGRFHLKTTNGWIEAE 122 Query: 131 QVVVAVGGYHIPVVPRAAERLPQHIVQLHSSQYLNPQSLPAGEVLVVGTGQSGCQIAEDL 190 +VV+A G + P +P + + Q+HSS Y NP +P VLVVG G SG QIA +L Sbjct: 123 KVVIATGAFQKPYLPPVLDSANNEMSQVHSSAYRNPAQIPGKSVLVVGGGNSGAQIAVEL 182 Query: 191 HLAGRRVHLGVGDAPR-VARSYRGKDVVEWLD 221 R V + + R + K + WL+ Sbjct: 183 -AKERNVTMAISHPFRFLPLKLLNKSMFSWLE 213 Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 1/69 (1%) Query: 345 VVWCIGFRTDFSWIN-EPIFDGRGYPGHERGVTAASGLYFLGLPWQYTWGSGRFSGIDRD 403 ++W GF + WI+ + + G+P H RG+T GLYFLGLPWQY GS G+ RD Sbjct: 278 IIWSTGFSPSYEWIDIDGVIATNGWPIHNRGITNIRGLYFLGLPWQYQRGSALVCGVGRD 337 Query: 404 ARYLFEHIS 412 A YL I Sbjct: 338 AEYLVPFIK 346 >mll7934 [P] COG2072 Predicted flavoprotein involved in K+ transport Mlo Mesorhizobium loti Length = 395 Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 63/179 (35%), Positives = 94/179 (52%), Gaps = 3/179 (1%) Query: 13 SVIIIGGGQAGLSMSWYLKRSGVDHLVLEK-HQVGHAWRNERWDTFCLVTPNWQCNLPGY 71 +V IIG G AGL+++ L+++GVD +++EK Q AWR ++ L T +LP Sbjct: 21 TVAIIGAGPAGLAVAACLRQAGVDFIIIEKEQQAAPAWRRH-YERVHLHTTKRYSSLPFV 79 Query: 72 PYRGNDPYGFMKKDEIVDYLDGFVASFDPPVREGVTVNKLWRDGALWRISASDGQYAADQ 131 P+ + P ++ + VDYLD + FD + G TV + +DG WR+ A+ G A Sbjct: 80 PFPKHYPR-YVPRALFVDYLDAYAQRFDLRPQFGETVKAVTQDGRGWRVDAASGPLRAKD 138 Query: 132 VVVAVGGYHIPVVPRAAERLPQHIVQLHSSQYLNPQSLPAGEVLVVGTGQSGCQIAEDL 190 VV+A G P+ P A LHS+ Y N + VLV+G G +G +IA DL Sbjct: 139 VVIASGYNAEPLRPAFAGIDTFTGKTLHSADYRNAKPFAGQSVLVIGMGNTGAEIALDL 197