BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2830.p         (199 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll1425 Non COG                                                       194   1e-49
SMc01424 Non COG                                                      186   2e-47
XF1535 [C] COG0372 Citrate synthase Xfa Xylella fastidiosa 9a5c        34   0.18 
all2027 Non COG                                                        33   0.40 
ECU05g0380 Non COG                                                     33   0.47 

>mll1425 Non COG
          Length = 201

 Score =  194 bits (492), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 96/182 (52%), Positives = 121/182 (66%)

Query: 16  RAWALFKVLNDKKLIPEGYIEGLTDLLANKFSPANGARVVAKAWSDPQYRELLLRDGTAA 75
           R  AL  +L  K LI    I+ + D    K  P NGARVVAKAWSDP Y + L RD TAA
Sbjct: 17  RVRALETILTRKGLIDPAAIDIIVDTYETKIGPRNGARVVAKAWSDPAYADWLKRDATAA 76

Query: 76  CEQFGYTGPQGEYIVALEDTPTLKNVIVCSLCSCTNWPVLGLPPEWYKGFEFRARLVREG 135
            E   YTG QGE++ A+ +T    N++VC+LCSC  W VLGLPP WYK   +R+R V + 
Sbjct: 77  IESLSYTGRQGEHMQAVFNTEETHNLVVCTLCSCYPWSVLGLPPVWYKAPPYRSRAVIDP 136

Query: 136 RTVLAELGTELPKDMAVKVWDTSAETRYLVLPMRPAGTEGWSEEALSKLVTKDVLIGVAL 195
           R VL E G  L     ++VWD++AE RYLV+PMRPAGTEGWSEE L++LV++D +IG AL
Sbjct: 137 RGVLEEFGLTLAATTKIRVWDSTAELRYLVVPMRPAGTEGWSEEQLAELVSRDAMIGTAL 196

Query: 196 PK 197
            +
Sbjct: 197 AR 198


>SMc01424 Non COG
          Length = 213

 Score =  186 bits (473), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 94/180 (52%), Positives = 121/180 (67%)

Query: 16  RAWALFKVLNDKKLIPEGYIEGLTDLLANKFSPANGARVVAKAWSDPQYRELLLRDGTAA 75
           R  AL  VL +K LI    I+ + D    K  P NGARVVAKAWSDP + + L RD TAA
Sbjct: 26  RVKALETVLTEKGLIDPAAIDAIVDAYETKVGPRNGARVVAKAWSDPGFADWLKRDATAA 85

Query: 76  CEQFGYTGPQGEYIVALEDTPTLKNVIVCSLCSCTNWPVLGLPPEWYKGFEFRARLVREG 135
               G+TG QGE++ A+ +T    N+IVC+LCSC  W VLGLPP WYK   +R+R V + 
Sbjct: 86  IASLGFTGRQGEHMRAVFNTSETHNLIVCTLCSCYPWAVLGLPPVWYKAPPYRSRAVIDP 145

Query: 136 RTVLAELGTELPKDMAVKVWDTSAETRYLVLPMRPAGTEGWSEEALSKLVTKDVLIGVAL 195
           R VLAE G EL  +  V+VWD++AE RYLV+P RP GT+G+ E+AL++LVT+D +IG  L
Sbjct: 146 RGVLAEFGLELSAEKKVRVWDSTAELRYLVVPERPEGTDGFGEDALAELVTRDSMIGTGL 205


>XF1535 [C] COG0372 Citrate synthase Xfa Xylella fastidiosa 9a5c
          Length = 429

 Score = 34.3 bits (77), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)

Query: 94  DTPTLKNVIVCSLCSCTNWP--VLGLPPEWYKGFEFRARLVRE-GRTVLAELGTELP-KD 149
           D   +  VI  +     N P  ++G     YK F+ RA+++RE   TVL ELG   P  +
Sbjct: 282 DAKNVDLVIAKAKTKDKNSPFRLMGFGHRVYKHFDPRAKIIREMAHTVLGELGVNDPLLE 341

Query: 150 MAVKVWDTSAETRYLV 165
           +A+K+ + + +  Y V
Sbjct: 342 VALKLEEAALKDDYFV 357


>all2027 Non COG
          Length = 111

 Score = 33.1 bits (74), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 52 ARVVAKAWSDPQYRELLLRDGTAACEQ-FGYTGPQGEYIVALEDTPT 97
          A+++ +AW D  YR+ LL +     EQ FG   P+G  +  +E+  +
Sbjct: 13 AQIIVQAWKDEAYRQELLNNPKKIVEQEFGVQLPEGITVHVMEENAS 59



 Score = 32.3 bits (72), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 122 YKGFEFRARLVREGRTVL-AELGTELPKDMAVKVWDTSAETRYLVLPMRP 170
           +K   +R  L+   + ++  E G +LP+ + V V + +A   Y V+P RP
Sbjct: 20  WKDEAYRQELLNNPKKIVEQEFGVQLPEGITVHVMEENASNLYFVIPARP 69


>ECU05g0380 Non COG
          Length = 218

 Score = 32.7 bits (73), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 129 ARLVREGRTVLAELGTELPKDMAVKVWDTSAETRYLVLPMRPAG-TEGWSEEALSKLVTK 187
           A LV   +  L  LG EL       + D     +Y V  +RP+G T  WSEE   +LV  
Sbjct: 79  ATLVESSKKYLVRLGLELVGIDKAGIVDLPVAEKYFVRRLRPSGDTAVWSEEEFRRLVMT 138

Query: 188 DVLI 191
             L+
Sbjct: 139 FALV 142