BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2817.p         (156 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Cgl0313 [S] COG3600 Uncharacterized phage-associated protein Cgl...    79   3e-15
XF1793 [S] COG3600 Uncharacterized phage-associated protein Xfa ...    72   5e-13
XF0537 [S] COG3600 Uncharacterized phage-associated protein Xfa ...    67   1e-11
L197116 [S] COG3600 Uncharacterized phage-associated protein Lla...    63   3e-10
CC3515 [S] COG3600 Uncharacterized phage-associated protein Ccr ...    61   7e-10

>Cgl0313 [S] COG3600 Uncharacterized phage-associated protein Cgl
           Corynebacterium glutamicum
          Length = 148

 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 76/144 (52%), Gaps = 10/144 (6%)

Query: 7   ARQVAQYILARRQSVGDAVTPMQLIKLAYIAQGYMLGRHGRPLFKEAVEAWQYGPVVPSV 66
           AR++A++ +A    +   V+P++L KL Y +QG  +   GR LF + + AWQ+GPV P V
Sbjct: 6   AREIAEWFVAWGDELDAEVSPLKLQKLLYYSQGEHIAATGRKLFSDKILAWQHGPVTPGV 65

Query: 67  YHAVKDYRSSP------VQKVANLDYDFSQAEREIMDMVADTYGGYDGIVLSSATHQSGS 120
           Y   K Y  +P      V    N D D+S    E++  V   YG Y    L   TH S S
Sbjct: 66  YSDTKSYGRNPIDPDEFVSDEFNWD-DYSDVSDELV-TVWRKYGIYSAWALREKTH-SES 122

Query: 121 PWDITWSRIGKNAVISNDIIEHFY 144
           PW   W++ G+N  I++  ++ F+
Sbjct: 123 PWLDAWAQ-GQNIEITDAALKDFF 145


>XF1793 [S] COG3600 Uncharacterized phage-associated protein Xfa Xylella
          fastidiosa 9a5c
          Length = 102

 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 49/72 (68%)

Query: 10 VAQYILARRQSVGDAVTPMQLIKLAYIAQGYMLGRHGRPLFKEAVEAWQYGPVVPSVYHA 69
          +A   L +    G A+TP+Q++KL Y+A G+ LG H +PL  E VEAW+ GPV+ S+Y+A
Sbjct: 8  IANAFLQKAPQEGRALTPLQVLKLVYLAHGWCLGVHRQPLIDEPVEAWRAGPVIRSLYNA 67

Query: 70 VKDYRSSPVQKV 81
          +K Y SS + K+
Sbjct: 68 IKQYGSSGITKL 79


>XF0537 [S] COG3600 Uncharacterized phage-associated protein Xfa Xylella
           fastidiosa 9a5c
          Length = 135

 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 19/127 (14%)

Query: 45  HGRPLFKEAVEAWQYGPVVPSVYHAVKDYRSSPV-QKVANLDYDFSQAER------EIMD 97
           H +PL  E VEAW+ GPV+ S+Y+A+K Y SS + +++    + + +A +       I+ 
Sbjct: 4   HRQPLIDEPVEAWRAGPVIRSLYNAIKQYGSSAITERLPVRWFSWGRALKIDATAAAILA 63

Query: 98  MVADTYGGYDGIVLSSATHQSGSPWDITWSRIGKNA------VISNDIIEHFY------R 145
            V  TY  Y G+ L++ T   GSPW  TW  +   A      VI N +I+ FY       
Sbjct: 64  SVWATYRRYGGVELAAITRAEGSPWWTTWKELNGKAMDAERWVIDNALIQAFYAQKIKAH 123

Query: 146 NLGSQQH 152
           N G  +H
Sbjct: 124 NAGEGEH 130


>L197116 [S] COG3600 Uncharacterized phage-associated protein Lla
           Lactococcus lactis
          Length = 306

 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 14/149 (9%)

Query: 5   ADARQVAQYILARRQSVGDAVTPMQLIKLAYIAQGYMLGRHGRPLFKEAVEAWQYGPVVP 64
            D  ++   IL +     + +T M+++KL Y AQ   L  +G+PLF   + AW++GPVV 
Sbjct: 155 VDWFRIKNIILQKSDEYVEDLTQMKVMKLVYYAQAVSLHWYGKPLFSNPILAWKHGPVVQ 214

Query: 65  SVYHA-------VKDYRSS-PVQKVANL-DYDFSQAEREIMDMVADTYGGYDGIVLSSAT 115
            +Y+        V+D RS  P + + N  +   ++   ++++ V +  G Y    L   T
Sbjct: 215 EIYNEYHGSYSIVEDLRSEIPEELLKNYNELSVNKKMSKVLNFVQEQLGSYSAWTLRDKT 274

Query: 116 HQSGSPWDITWSRIGKNAVISNDIIEHFY 144
           H    PW  T     +++VISN  I+ ++
Sbjct: 275 HNE-EPWINTI----QSSVISNKSIKKYF 298


>CC3515 [S] COG3600 Uncharacterized phage-associated protein Ccr
           Caulobacter vibrioides
          Length = 188

 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 15/156 (9%)

Query: 4   AADARQVAQYILARRQSVGDAVTPMQLIKLAYIAQGYMLGRHGRPLFKEAVEAWQYGPVV 63
           + DAR VA  +L +  ++   ++ + L KL Y A G  L   GRPL     EAW++GPV 
Sbjct: 10  SVDARAVANLLLDKAAALDIPISNLALQKLLYFAHGRFLVDKGRPLVNGFFEAWKFGPVH 69

Query: 64  PSVY-------------HAVKDYRSSPVQKVANLDYDFSQAEREIMDMVADTYGGYDGIV 110
           P VY              A+K    S +  + +   D  Q   E ++ V  T G      
Sbjct: 70  PVVYRCFSANGPKYIINRAIKKDILSGLHIIVSPPRD--QDIHEGIERVLLTMGRMSASQ 127

Query: 111 LSSATHQSGSPWDITWSRIGKNAVISNDIIEHFYRN 146
           L + +H SG PWD+  +  G N  +   I +   ++
Sbjct: 128 LVAVSHASGGPWDVIANGPGTNLGLGLRICDKVIKD 163