BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2768.p         (113 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BMEII0884 Non COG                                                     102   2e-22
RC0541 Non COG                                                         80   1e-15
RP394 Non COG                                                          76   2e-14
YPO1855 [P] COG2822 Predicted periplasmic lipoprotein involved i...    41   8e-04
ZycdO [P] COG2822 Predicted periplasmic lipoprotein involved in ...    37   0.008

>BMEII0884 Non COG
          Length = 124

 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/102 (48%), Positives = 70/102 (68%)

Query: 12  ALALLGLAAQVQASDLPTFKLEMQDGKLIPPRIEVPAGQRIKIEVHNTGKSAVEFESVEL 71
            + LL +A+ V  ++ PTF+LE ++G + P R+EVPA  R +IE+ NTG    EFES+EL
Sbjct: 23  GVVLLAVASSVAWAEEPTFRLEFKEGVITPDRLEVPANTRFRIELVNTGSMPAEFESLEL 82

Query: 72  RKEKVLAPGAQSFVVIAPLRPGEYKFFDDFHLNMPQGVIVAK 113
           RKEKV+A  +++ +VI  L PGEY FFDDFH      +++AK
Sbjct: 83  RKEKVIAAQSETVMVIRTLDPGEYPFFDDFHPGGTPAILIAK 124


>RC0541 Non COG
          Length = 126

 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 53/83 (63%)

Query: 31  KLEMQDGKLIPPRIEVPAGQRIKIEVHNTGKSAVEFESVELRKEKVLAPGAQSFVVIAPL 90
           K+ +QD K +P  +EVP   +I++ VHN   +  EFES +L +EK++ P     +++APL
Sbjct: 43  KIAIQDHKFVPNIVEVPKSTKIRLIVHNEDDTVEEFESHDLHREKIVMPNESIHIILAPL 102

Query: 91  RPGEYKFFDDFHLNMPQGVIVAK 113
           + G+Y+FF DFH +  QG I+  
Sbjct: 103 KSGKYEFFGDFHQDTAQGFIIVN 125


>RP394 Non COG
          Length = 125

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 53/83 (63%)

Query: 31  KLEMQDGKLIPPRIEVPAGQRIKIEVHNTGKSAVEFESVELRKEKVLAPGAQSFVVIAPL 90
           K+ ++D K +P  +EVP   +I++ +HN   +  EFES +L +EK++ P     +++APL
Sbjct: 42  KITIKDHKFVPNIVEVPKSTKIRLIIHNADDTIEEFESHDLHREKIVMPHESINIILAPL 101

Query: 91  RPGEYKFFDDFHLNMPQGVIVAK 113
           +PG+Y+ F DFH +  QG I+  
Sbjct: 102 KPGKYEIFGDFHQDTAQGFIIVN 124


>YPO1855 [P] COG2822 Predicted periplasmic lipoprotein involved in iron
           transport Ype Yersinia pestis
          Length = 376

 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)

Query: 7   RLSCLALALLGL---AAQVQASDLPTFKLEMQDGKLIPPRIEVPAGQRIKIEVHNTGKSA 63
           R + L  ALL L   A   QA+D+   K+ + D +  P  + VPAG + +  VHN  +  
Sbjct: 7   RRTALHAALLSLPVFAISAQAADIQQVKITVNDKQCEPMALTVPAG-KTQFIVHNVSQKG 65

Query: 64  VEFESVE----LRKEKVLAPGAQSFVVIAPLRPGEY 95
           +E+E ++    + + + +APG     + A L PGEY
Sbjct: 66  LEWEILKGVMVVEERENIAPGFTQ-KMTANLEPGEY 100


>ZycdO [P] COG2822 Predicted periplasmic lipoprotein involved in iron
           transport EcZ Escherichia coli O157:H7 EDL933
          Length = 375

 Score = 37.4 bits (85), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 7/104 (6%)

Query: 14  ALLGLAAQVQASDLPTFKLEMQDGKLIPPRIEVPAGQRIKIEVHNTGKSAVEFESVE--- 70
           AL   A    A+D+P  K+ + D +  P  I V AG + +  + N  + A+E+E ++   
Sbjct: 16  ALFSSAFMANAADVPQVKVTVTDKQCEPMTITVNAG-KTQFIIQNHSQKALEWEILKGVM 74

Query: 71  -LRKEKVLAPGAQSFVVIAPLRPGEYKFFDDFHLNMPQGVIVAK 113
            + + + +APG  S  + A L+PGEY        N P+G ++ K
Sbjct: 75  VVEERENIAPGF-SQKMTANLQPGEYDMTCGLLTN-PKGKLIVK 116