BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2761.p (1066 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1545 [T] COG5001 Predicted signal transduction protein contai... 301 4e-81 PA0575_4 [T] COG2200 FOG Pae Pseudomonas aeruginosa 242 4e-63 all4225_2 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 242 4e-63 PA1727_3 [T] COG2200 FOG Pae Pseudomonas aeruginosa 239 3e-62 RSc0510_3 [T] COG2200 FOG Rso Ralstonia solanacearum 238 5e-62 >RSc1545 [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Rso Ralstonia solanacearum Length = 776 Score = 301 bits (772), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 176/426 (41%), Positives = 251/426 (58%), Gaps = 11/426 (2%) Query: 616 ADERIRHLAHYDELTGLPNRFLCTQHVSNAITHAEHRNGLVAVLLMDLDRFKNINDTFGH 675 A+ RIR LAHYD LTGL NR + + + E R GL L +DLD FK +NDT GH Sbjct: 334 AENRIRQLAHYDTLTGLANRTNFREQLDARLAAPEARLGL---LYIDLDGFKLVNDTKGH 390 Query: 676 QAGEAVLQEIAQRFRHSL-RELDILARVGGDEFIVLVDDFDDPLQLGEIAQKLLTEARKP 734 +AG+A+L+ +AQR R R +AR+GGDEF VLV DD + +A L+ P Sbjct: 391 RAGDALLERVAQRLRAVCDRPGMAIARLGGDEFAVLVPH-DDADRAATLATALIEALGAP 449 Query: 735 FIIDG-QEATLSASIGIATYPGDGDNAQTLIKNADIAMYRAKHHGKDDYRFFSDEVNTNT 793 + + Q + ASIGIA P G + + L+ ADIA+Y AK GK R F ++ T Sbjct: 450 YALGADQNVRIGASIGIALAPAHGRDTENLLARADIALYAAKAAGKGLARLFCADMETRI 509 Query: 794 VERIALEAELRRAIERAE-FVVHYQPKVDLASGAIVGAEALVRWQHPVRGLVGPNEFIPM 852 R LEA+LR A+E + V YQP VD+A+G + EALVRW H RG V P+EF+P+ Sbjct: 510 QARALLEAQLRAALEHQDRLFVFYQPIVDVATGKVTAREALVRWHHAERGWVPPDEFVPI 569 Query: 853 AEESRLIDQIGLVVLDIACRDIGLLLEHQLECGRISINLTGSQFGDAHLLQDIKGVVQRH 912 AE+S LIDQ+G VL ACR+ + R+++N++ Q G A L Q + + Sbjct: 570 AEQSGLIDQLGRFVLHRACREA----TRWEDGARVAVNVSPMQLGKATLAQTVHAALIDS 625 Query: 913 GTPPACLEFEITESMVMRNRDRAIAIMDGIRAEGFTISIDDFGTGYSSLAYLKRFPVNTL 972 G P LE E+TE+ +++N + + + G +++DDFGTGYSSLA+L+ FP + + Sbjct: 626 GLAPDRLEIEVTETALIQNEAESFEDLRQLYDMGVRVALDDFGTGYSSLAHLRAFPFDKI 685 Query: 973 KIDKSFINDIPDDANSSAIVQAIIAMSHALNLKVVTEGVETERQWQALREFGSDEYQGYY 1032 KID+SF+ D+ + +S+ +V+AI + L + V EGVET+ + +RE G E QGYY Sbjct: 686 KIDRSFVRDLLERPDSAVLVRAIADLGRQLGVTTVAEGVETQAHVRGIREAGCTEAQGYY 745 Query: 1033 FSKPVP 1038 + +P P Sbjct: 746 YGRPAP 751 >PA0575_4 [T] COG2200 FOG Pae Pseudomonas aeruginosa Length = 267 Score = 242 bits (617), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 118/254 (46%), Positives = 171/254 (67%) Query: 795 ERIALEAELRRAIERAEFVVHYQPKVDLASGAIVGAEALVRWQHPVRGLVGPNEFIPMAE 854 ER+ALE ELRRA+ER E ++YQPK+ L SG +VGAEALVRW HP+ G + P FIP+AE Sbjct: 1 ERMALETELRRALERDELQLYYQPKLSLESGLLVGAEALVRWYHPLFGEISPERFIPLAE 60 Query: 855 ESRLIDQIGLVVLDIACRDIGLLLEHQLECGRISINLTGSQFGDAHLLQDIKGVVQRHGT 914 + LI +G VL+ AC+ +G + G +S+NL G+Q G L++ ++ ++++ G Sbjct: 61 DCGLILPLGDWVLEHACQQMGEWQKLHAPFGPLSVNLAGAQLGQPQLIERLEQLLEQSGL 120 Query: 915 PPACLEFEITESMVMRNRDRAIAIMDGIRAEGFTISIDDFGTGYSSLAYLKRFPVNTLKI 974 P+ L+ EITES +M + A+A++ G++ G ++IDDFGTGYSSL+YLKR P++ LKI Sbjct: 121 EPSRLQLEITESFIMNQTEEALAVLHGLKRLGVQLAIDDFGTGYSSLSYLKRLPLDILKI 180 Query: 975 DKSFINDIPDDANSSAIVQAIIAMSHALNLKVVTEGVETERQWQALREFGSDEYQGYYFS 1034 DKSFI +PDD + +AI +AIIA+ ++ L V+ EGVETE Q L G ++ QG+ S Sbjct: 181 DKSFIRGLPDDPHDAAITRAIIALGRSMQLTVIAEGVETEGQQSFLTHEGCEQIQGFVLS 240 Query: 1035 KPVPYAQFLQMLLQ 1048 P+P F L+ Sbjct: 241 PPLPAELFASKFLK 254 >all4225_2 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 Length = 260 Score = 242 bits (617), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 119/257 (46%), Positives = 172/257 (66%) Query: 795 ERIALEAELRRAIERAEFVVHYQPKVDLASGAIVGAEALVRWQHPVRGLVGPNEFIPMAE 854 ER+ALE EL A+ER E VV+YQP +DL + I EALVRWQHP RGLV P +FIP+AE Sbjct: 1 ERLALENELHGALERNEIVVYYQPIIDLQTKQITAVEALVRWQHPTRGLVSPAKFIPIAE 60 Query: 855 ESRLIDQIGLVVLDIACRDIGLLLEHQLECGRISINLTGSQFGDAHLLQDIKGVVQRHGT 914 + LI +IG VL AC L R+S+NL+ QF +++L++ + ++Q G Sbjct: 61 ANGLIVEIGEWVLRTACLQNRTWQLAGLPPIRMSVNLSARQFEESNLVELVSEIIQESGL 120 Query: 915 PPACLEFEITESMVMRNRDRAIAIMDGIRAEGFTISIDDFGTGYSSLAYLKRFPVNTLKI 974 P+ LE E+TES +M + R++ I+ +R G +++DDFGTGYSSL YLKRFPVN LKI Sbjct: 121 HPSYLELEVTESSLMTDIQRSVTILKQLRELGVWLALDDFGTGYSSLNYLKRFPVNMLKI 180 Query: 975 DKSFINDIPDDANSSAIVQAIIAMSHALNLKVVTEGVETERQWQALREFGSDEYQGYYFS 1034 D+SF+ D+ + +S+A+ AIIA++ +L LK+ EG+ET++Q L++ G E QGYYF Sbjct: 181 DRSFVQDVCSNPDSAAVTNAIIALAKSLQLKITAEGIETQQQLSYLQKRGCQEGQGYYFG 240 Query: 1035 KPVPYAQFLQMLLQQQA 1051 P P + +++L ++A Sbjct: 241 IPAPAKEIMEILQPKEA 257 >PA1727_3 [T] COG2200 FOG Pae Pseudomonas aeruginosa Length = 254 Score = 239 bits (609), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 116/249 (46%), Positives = 166/249 (66%) Query: 795 ERIALEAELRRAIERAEFVVHYQPKVDLASGAIVGAEALVRWQHPVRGLVGPNEFIPMAE 854 E++ L +LR+A+ER + V+HYQPKV +G ++G EAL+RW+HP GL+ P +F+P+AE Sbjct: 2 EQLQLLHDLRQALERRQLVLHYQPKVLAPNGPMIGVEALLRWEHPQHGLITPGQFLPLAE 61 Query: 855 ESRLIDQIGLVVLDIACRDIGLLLEHQLECGRISINLTGSQFGDAHLLQDIKGVVQRHGT 914 ++ LI QIG VLD ACR + L L+ I++NL+ QF A L+ ++ + RH Sbjct: 62 KTGLIVQIGEWVLDEACRQMRLWLDGGHADWNIAVNLSALQFAHAGLVDSVRNALLRHSL 121 Query: 915 PPACLEFEITESMVMRNRDRAIAIMDGIRAEGFTISIDDFGTGYSSLAYLKRFPVNTLKI 974 P+ L E+TES MR+ D ++ I++ + A G ISIDDFGTGYSSL YLKR P + LKI Sbjct: 122 EPSHLILEVTESTAMRDADASLVILEQLSAMGVGISIDDFGTGYSSLLYLKRLPASELKI 181 Query: 975 DKSFINDIPDDANSSAIVQAIIAMSHALNLKVVTEGVETERQWQALREFGSDEYQGYYFS 1034 D+ FIN++ D++ +AIV AI+A+ LNLK+V EGVETE Q + L G + QG+ Sbjct: 182 DRGFINELAHDSDDAAIVSAIVALGRTLNLKIVAEGVETEAQQEFLTRLGCNSLQGFLLG 241 Query: 1035 KPVPYAQFL 1043 +P+P Q L Sbjct: 242 RPMPAEQLL 250 >RSc0510_3 [T] COG2200 FOG Rso Ralstonia solanacearum Length = 282 Score = 238 bits (607), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 127/283 (44%), Positives = 169/283 (59%), Gaps = 5/283 (1%) Query: 782 YRFFSDEVNTNTVERIALEAELRRAIERAEFVVHYQPKVDLASGAIVGAEALVRWQHPVR 841 Y FF +NTN +++ L +LR A+ER E V+HYQPK G +VG EALVRWQHP R Sbjct: 1 YCFFEASMNTNVHQQLQLVQDLRLALERHELVLHYQPKFSAPHGPVVGVEALVRWQHPER 60 Query: 842 GLVGPNEFIPMAEESRLIDQIGLVVLDIACRDIGLLLEHQLECGRISINLTGSQFGDAHL 901 GLV P+ FIP+AE++ LI +G VLD ACR + I++NL+ QF A L Sbjct: 61 GLVQPDAFIPLAEKTGLIVPLGAWVLDEACRQMAQWRREGHAQWSIAVNLSAVQFAHAAL 120 Query: 902 LQDIKGVVQRHGTPPACLEFEITESMVMRNRDRAIAIMDGIRAEGFTISIDDFGTGYSSL 961 + ++ + RH P L EITES MR+ D ++ I+ + A G ISIDDFGTGYSSL Sbjct: 121 VDTVRDTLARHALEPQGLTLEITESTAMRDADASLHILQQLHAMGVRISIDDFGTGYSSL 180 Query: 962 AYLKRFPVNTLKIDKSFINDIPDDANSSAIVQAIIAMSHALNLKVVTEGVETERQWQALR 1021 YLKR P + LKID+ F+ D+ D+ +AIV A++A+ LNL++V EGVETE Q L Sbjct: 181 LYLKRLPASELKIDRGFVRDLAHDSEDAAIVSAVVALGQTLNLRIVAEGVETEAQQAFLT 240 Query: 1022 EFGSDEYQGYYFSKPVPYAQFLQMLLQQQAQRQAHQLQ-MAAD 1063 G QG +P+ Q +L+ QA LQ MAA+ Sbjct: 241 RLGCHALQGNLLGRPMTA----QAVLEAAGLAQAQGLQAMAAE 279